Gchil6751.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil6751.t1
Unique Name	Gchil6751.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	213

Homology

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BLAST of Gchil6751.t1 vs. uniprot
Match: A0A2V3J2R8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2R8_9FLOR)

HSP 1 Score: 244 bits (622), Expect = 7.290e-79
Identity = 151/215 (70.23%), Postives = 164/215 (76.28%), Query Frame = 0

Query:    1 MDLAMMLSAEKRDESNPPPYVD-PPTSDPTQLPLPHKRARLDATTNPLPSHKPQTXXXXXXXXXXXXXXXXXXXXYSELQKAVHNALESRTPALTTADKVALALEVLRARQLELDLAQARSNIEALVSNSGATPRTLRAVIPSTAVKGLPVGTPVDIERARFLLTPTTNDPQALYLTLELQGFGGSHNDEAQSGATCSA----RDEAQSQLLEKP 210
            MDLAMMLSA+KR+E++ PPYV  PPTSD  Q   PHKRAR DA   PLPS +            XXXXXXX    YSEL+KAVHNALESR PALTTADKVALALEVLRARQLELDLAQARSNIEALV+NSG  PRTLRAVIPSTAVKGLPVGTPVDIERARFLLTPTTNDPQAL+LTLELQ FGG+   + Q     +      +E QSQ L+ P
Sbjct:    1 MDLAMMLSADKREEASSPPYVAAPPTSD--QPSHPHKRARTDAPVTPLPSQQ-TAQPRDSPTAAXXXXXXXASSPYSELRKAVHNALESRAPALTTADKVALALEVLRARQLELDLAQARSNIEALVNNSGTAPRTLRAVIPSTAVKGLPVGTPVDIERARFLLTPTTNDPQALFLTLELQSFGGASQPQQQQQVHHTLPNGNHNETQSQTLDTP 212

[Close]

BLAST of Gchil6751.t1 vs. uniprot
Match: R7QGC3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGC3_CHOCR)

HSP 1 Score: 168 bits (426), Expect = 1.110e-48
Identity = 106/229 (46.29%), Postives = 137/229 (59.83%), Query Frame = 0

Query:    1 MDLAMMLSAEKRDESNPPPYVDPPTSDPTQLPLPHKRARLDATTNPLPSHKPQTXXXXXXXXXXXXXXXXXXXX---------------YSELQKAVHNALESRTPALTTADKVALALEVLRARQLELDLAQARSNIEALVSNSGATPRTLRAVIPSTAVKGLPVGTPVDIERARFLLTPTTNDPQALYLTLELQGFGGS--HNDEAQSGATCSARDEAQSQLLEKPVE 212
            MDLAMMLS +KR+++  P  V       ++ P+P KRAR++   + L   +P+                                    Y +LQ+AVHNALE +T  LTT+DKVALALEVLRARQLELDLAQAR+NIEALV+ +  TPRTLRAVIP++ VKGLPVG P+DI   +FLL+PT NDPQAL+LTL+LQ FG    +  +A         D+  S    +P+E
Sbjct:    1 MDLAMMLSGDKREDTIAPAPV-------SEGPVP-KRARVELRHSSLSPDRPRVHADPPPTSVQLDARKTPPPVPVSSAPRPDGPAVGPYFDLQQAVHNALEGKTATLTTSDKVALALEVLRARQLELDLAQARNNIEALVTKASTTPRTLRAVIPASTVKGLPVGFPIDISNGKFLLSPTHNDPQALFLTLDLQSFGPQKGYPQQAPQAPKVGGEDKVASTAETRPLE 221

The following BLAST results are available for this feature:

BLAST of Gchil6751.t1 vs. uniprot

BLAST of Gchil6751.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J2R8_9FLOR	7.290e-79	70.23	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QGC3_CHOCR	1.110e-48	46.29	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 108..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..61

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004416_pilon	contig	tig00004416_pilon:859329..859967 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil6751.t1	Gchil6751.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004416_pilon 859329..859967 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil6751.t1 ID=Gchil6751.t1|Name=Gchil6751.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=213bp
MDLAMMLSAEKRDESNPPPYVDPPTSDPTQLPLPHKRARLDATTNPLPSH
KPQTPSREPVIPSASSPVPPASSPYSELQKAVHNALESRTPALTTADKVA
LALEVLRARQLELDLAQARSNIEALVSNSGATPRTLRAVIPSTAVKGLPV
GTPVDIERARFLLTPTTNDPQALYLTLELQGFGGSHNDEAQSGATCSARD
EAQSQLLEKPVE*