Gchil6780.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
|
Overview
Homology
BLAST of Gchil6780.t1 vs. uniprot
Match: A0A2V3J4M2_9FLOR (Sm-like protein LSM7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4M2_9FLOR) HSP 1 Score: 138 bits (347), Expect = 6.290e-40 Identity = 66/100 (66.00%), Postives = 80/100 (80.00%), Query Frame = 0
Query: 28 RKSPQHRLLHDLSKHAGDRVQVQLTGGRLVRGVLKGWDPLLNLVLDDAVEQLRDPLDASALVARHRRLGLLIARGTSVITIAPLHGLESIHNPFLAQPTV 127
RK+P H+++ DLSKH VQV LTGGR ++GVLKGWDPLLNLVLD+ VEQLRDP+D L + R+LGLL+ARGTSV+TIAP+ GLE I NPFL +P V
Sbjct: 10 RKNPPHKVILDLSKHINKNVQVHLTGGRQIQGVLKGWDPLLNLVLDEVVEQLRDPVDPYKLSGKQRKLGLLVARGTSVMTIAPVDGLEQIENPFLNKPLV 109
BLAST of Gchil6780.t1 vs. uniprot
Match: A0A6T6LUI4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6LUI4_9RHOD) HSP 1 Score: 114 bits (286), Expect = 9.900e-31 Identity = 56/93 (60.22%), Postives = 67/93 (72.04%), Query Frame = 0
Query: 32 QHRLLHDLSKHAGDRVQVQLTGGRLVRGVLKGWDPLLNLVLDDAVEQLRDPLDASALVARHRRLGLLIARGTSVITIAPLHGLESIHNPFLAQ 124
Q ++ DLSKH V V+L GGR +RG LKGWDPL+NLVLDDAVE LRDP D L + R+LGLL+ARGTSV+TI P G+E NPF+ Q
Sbjct: 10 QRPVVLDLSKHVERSVLVKLVGGRQIRGTLKGWDPLVNLVLDDAVEDLRDPTDPYILTGKARKLGLLVARGTSVMTICPTDGMEETENPFVEQ 102
BLAST of Gchil6780.t1 vs. uniprot
Match: R7QQI6_CHOCR (Sm-like protein, LSm7 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQI6_CHOCR) HSP 1 Score: 116 bits (291), Expect = 6.270e-30 Identity = 56/95 (58.95%), Postives = 73/95 (76.84%), Query Frame = 0
Query: 28 RKSPQHRLLHDLSKHAGDRVQVQLTGGRLVRGVLKGWDPLLNLVLDDAVEQLRDPLDASALVARHRRLGLLIARGTSVITIAPLHGLESIHNPFL 122
RKS +++ DLSKHA VQV+L+GGR V G+LKGWD LLN+VLD+AVE LRDP D L + R++GLL+ARGTSV+TI+P+ G+ I NPF+
Sbjct: 135 RKSQTPKVILDLSKHADKEVQVRLSGGRQVHGILKGWDQLLNVVLDEAVEDLRDPTDPYRLSGKERKIGLLVARGTSVMTISPVDGVTQIENPFV 229
BLAST of Gchil6780.t1 vs. uniprot
Match: Q7XY62_GRIJA (U6 snRNA-associated Sm-like protein LSm7 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY62_GRIJA) HSP 1 Score: 110 bits (274), Expect = 8.060e-29 Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 0
Query: 28 RKSPQHRLLHDLSKHAGDRVQVQLTGGRLVRGVLKGWDPLLNLVLDDAVEQLRDPLDASALVARHRRLGLLIARGTSVITIAPLHGLESIHNPF 121
+K +++ DLSK++ V V+L GGR VRGVLKGWDPLLNLVLD+ VEQLRD D+ L + R+LGL++ RGTSV+T++P+ G+E I NPF
Sbjct: 11 KKGASQKVILDLSKYSDKDVIVRLAGGRQVRGVLKGWDPLLNLVLDEVVEQLRDVDDSYRLSGKERKLGLVVVRGTSVMTVSPVDGVEQIENPF 104
BLAST of Gchil6780.t1 vs. uniprot
Match: A0A139AMB5_GONPJ (U6 snRNA-associated Sm-like protein LSm7 n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AMB5_GONPJ) HSP 1 Score: 102 bits (253), Expect = 2.790e-25 Identity = 50/84 (59.52%), Postives = 63/84 (75.00%), Query Frame = 0
Query: 38 DLSKHAGDRVQVQLTGGRLVRGVLKGWDPLLNLVLDDAVEQLRDPLDASALVARHRRLGLLIARGTSVITIAPLHGLESIHNPF 121
DL+++ R+ V+ GGR V GVLKG DPLLNLVLD+A EQLRDP D S L + R+LGL++ RGTSV+ I+PL G+E I NPF
Sbjct: 54 DLARYLDKRIFVKFAGGREVTGVLKGHDPLLNLVLDEATEQLRDPEDPSKLSGKSRQLGLMVCRGTSVVLISPLDGMEEIANPF 137
BLAST of Gchil6780.t1 vs. uniprot
Match: UPI0008F9BC15 (U6 snRNA-associated Sm-like protein LSm7 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=UPI0008F9BC15) HSP 1 Score: 100 bits (250), Expect = 3.620e-25 Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 0
Query: 38 DLSKHAGDRVQVQLTGGRLVRGVLKGWDPLLNLVLDDAVEQLRDPLDASALVARHRRLGLLIARGTSVITIAPLHGLESIHNPFLAQPT 126
DLSK+ +++V+ GGR V G+LKG+DPL+NLVLD +E LRDP D L R LGL++ RGTSV+ I PL GLESI NPF+ Q T
Sbjct: 23 DLSKYLEKKIKVKFAGGREVSGILKGYDPLVNLVLDSTIEYLRDPDDPYKLTDDTRMLGLVVCRGTSVVLICPLDGLESIPNPFVPQDT 111
BLAST of Gchil6780.t1 vs. uniprot
Match: M2XZX7_GALSU (U6 snRNA-associated Sm-like protein LSm7 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XZX7_GALSU) HSP 1 Score: 100 bits (249), Expect = 4.710e-25 Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 0
Query: 38 DLSKHAGDRVQVQLTGGRLVRGVLKGWDPLLNLVLDDAVEQLRDPLDASALVARHRRLGLLIARGTSVITIAPLHGLESIHNPF 121
D+SK+ RV V+L GGR V G+L+GWDPL+NLVLD+AVEQLRDP D + R+LGL++ RGTS++++ P+ G E I NPF
Sbjct: 20 DVSKYLDVRVYVRLLGGRQVSGILRGWDPLVNLVLDEAVEQLRDPEDPYKTTDKERKLGLVVIRGTSLVSVYPVEGAEEIVNPF 103
BLAST of Gchil6780.t1 vs. uniprot
Match: A0A8I6RNP9_CIMLE (Uncharacterized protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RNP9_CIMLE) HSP 1 Score: 100 bits (248), Expect = 7.270e-25 Identity = 48/87 (55.17%), Postives = 64/87 (73.56%), Query Frame = 0
Query: 38 DLSKHAGDRVQVQLTGGRLVRGVLKGWDPLLNLVLDDAVEQLRDPLDASALVARHRRLGLLIARGTSVITIAPLHGLESIHNPFLAQ 124
DLSK+ +++V+ +GGR G+LKG+DPLLNLVLD+ E LRDP DA L R LGL++ RGTSV+ I P+ G+ESI NPF++Q
Sbjct: 23 DLSKYLDKQIRVKFSGGREAAGILKGYDPLLNLVLDNTTEYLRDPDDAYKLTEDTRMLGLVVCRGTSVVLICPVDGMESIPNPFISQ 109
BLAST of Gchil6780.t1 vs. uniprot
Match: A0A4P9Z8I4_9ASCO (LSM-domain-containing protein n=1 Tax=Metschnikowia bicuspidata TaxID=27322 RepID=A0A4P9Z8I4_9ASCO) HSP 1 Score: 101 bits (251), Expect = 7.760e-25 Identity = 50/93 (53.76%), Postives = 65/93 (69.89%), Query Frame = 0
Query: 31 PQHRLLHDLSKHAGDRVQVQLTGGRLVRGVLKGWDPLLNLVLDDAVEQLRDPLDASALVARHRRLGLLIARGTSVITIAPLHGLESIHNPFLA 123
P+ + DL K+ G +VQV+ GGR V GVLKG+D L+NLVL+D VE LRDP D S L + R LG +I RG ++T++PLHG E+I NPF A
Sbjct: 55 PKKEAIVDLHKYFGQQVQVKFVGGRYVEGVLKGFDQLMNLVLEDVVETLRDPEDLSILTDQTRPLGKVIVRGPQMLTLSPLHGTENISNPFAA 147
BLAST of Gchil6780.t1 vs. uniprot
Match: A0A6P7FQ17_DIAVI (U6 snRNA-associated Sm-like protein LSm7 n=2 Tax=Chrysomelidae TaxID=27439 RepID=A0A6P7FQ17_DIAVI) HSP 1 Score: 99.4 bits (246), Expect = 1.680e-24 Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 0
Query: 38 DLSKHAGDRVQVQLTGGRLVRGVLKGWDPLLNLVLDDAVEQLRDPLDASALVARHRRLGLLIARGTSVITIAPLHGLESIHNPFLAQ 124
DLSK+ ++V+ GGR GVLKG+DPLLNLVLD+ E LRDP D L+ R+LGL++ RGTSV+ I P+ G+ESI NPF++Q
Sbjct: 29 DLSKYLEKTIRVKFAGGREASGVLKGYDPLLNLVLDNTSEYLRDPDDPYKLIEDTRQLGLVVCRGTSVVLICPMDGMESIQNPFISQ 115 The following BLAST results are available for this feature:
BLAST of Gchil6780.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil6780.t1 ID=Gchil6780.t1|Name=Gchil6780.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=128bpback to top |