Gchil1377.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil1377.t1
Unique Name	Gchil1377.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	328

Homology

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BLAST of Gchil1377.t1 vs. uniprot
Match: R7Q2L6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2L6_CHOCR)

HSP 1 Score: 229 bits (585), Expect = 2.080e-69
Identity = 120/298 (40.27%), Postives = 181/298 (60.74%), Query Frame = 0

Query:   25 VMSTSLPEGVTRRRVPLITKDLVTVTNPEVLRKIAASPDIVRPGEAKLPWLLQTFFGATKVYYADENRWFIGMDGDEKNNRLARRKVVENLISNGFTPERIDKLTEAVKSDCDQTHLAAEVAKAVAELVLPLPEGEELPQEVAEATWLSAKELSVAYNPFQFFPALSENRKVQAYLRSVLSDEDELVDFLHHLSSGSQGIGRGLMVMRGDTTTDVHTFFCKNPVLSNGVLRVPAVETTLDGIFPENAPLLPTSIIVMDNMTCAKDTMDSDFLFGMGIEKRQCPFKNLFFDTTAEIQRR 322
            VMST+LP GV R  VP + KD+V V++  ++RKIA++PDI R G A+LPW+ Q  F AT+ YY  E+RW I    DE++NR  RR  VE  +  GF  ++I +L E V+ D +  ++  E  K VAE++  +  G++LPQE+A+A       L +   P  +    +   K++ Y   +L D  E+VD++H+L++ +   G  LM +R  T+ +  ++F  NP+L   + R P   TT+ G+FP++  L P S+I++D  + AK T D  FLFG G+E RQCPFK +FFDT  +IQ R
Sbjct:   72 VMSTTLPAGVKRFGVPFLLKDVVIVSDAALIRKIASNPDITRSGGAELPWIFQKIFLATQFYYPKEDRWHIASLADEQDNRPNRRHDVEEYLKQGFNEDQISRLVELVEGDGNVEYVRKEAVKVVAEIIGGVRPGQKLPQEIADAAAQIMFFLPIGVGPGGYLRGRAAREKLENYCVDLLPDGSEIVDYVHNLATPT-AFGDALMALRNTTSPNPKSYFLNNPLLPI-LYRFPKKTTTVGGLFPQDGALKPGSVIILDLASAAKATQDEKFLFGTGLETRQCPFKGVFFDTVDKIQSR 367

The following BLAST results are available for this feature:

BLAST of Gchil1377.t1 vs. uniprot

BLAST of Gchil1377.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
R7Q2L6_CHOCR	2.080e-69	40.27	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..327
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004414_pilon	contig	tig00004414_pilon:69950..70933 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil1377.t1	Gchil1377.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004414_pilon 69950..70933 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil1377.t1 ID=Gchil1377.t1|Name=Gchil1377.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=328bp
MMPTLCFVVAPGFLNSFKRHSRSFVMSTSLPEGVTRRRVPLITKDLVTVT
NPEVLRKIAASPDIVRPGEAKLPWLLQTFFGATKVYYADENRWFIGMDGD
EKNNRLARRKVVENLISNGFTPERIDKLTEAVKSDCDQTHLAAEVAKAVA
ELVLPLPEGEELPQEVAEATWLSAKELSVAYNPFQFFPALSENRKVQAYL
RSVLSDEDELVDFLHHLSSGSQGIGRGLMVMRGDTTTDVHTFFCKNPVLS
NGVLRVPAVETTLDGIFPENAPLLPTSIIVMDNMTCAKDTMDSDFLFGMG
IEKRQCPFKNLFFDTTAEIQRRMRNES*