Gchil1373.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1373.t1
Unique NameGchil1373.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length435
Homology
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BLAST of Gchil1373.t1 vs. uniprot
Match: A0A2V3IQ73_9FLOR (CULLIN_2 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ73_9FLOR)

HSP 1 Score: 115 bits (287), Expect = 8.460e-24
Identity = 84/274 (30.66%), Postives = 147/274 (53.65%), Query Frame = 0 
Query:   80 DRFSDFIQHHTPDGSIYRGPPITGI-HLTSVTAVEGDILDPECFHQR-LRLPSEICQIHRFAASYYKSLYPFRKLSPTPCNDLSTDHISTSFFSEKISMPVSFKANLYQACVLKFFE-EYESGTYLQIRRIPLASNNVHEESKQENIRVRQALLSLSTELAPVLIRTRVKKDARFSFRLNDRWNPYASSIDLASMYRDLYISSLDRRQERRIRRLVEIEILKTFSKDQRTAQNREAPIPVEYLVETTMNQNIHDSLSVPYVQMCLKGLVDRGEV 350
            D F  ++QHH P+G  + G        LTS+T VE      +    R L+LP EI ++ ++ +S+++  YP R+LS    N LST  I TS FS++ S+ +  + N+YQA VL  F+ E    +Y ++    ++S    E+   E +R+RQA+LSL+++  P+L++   ++ +   F LN  +      +D+   Y+D Y+ SLDR  E ++R++++  ++   S       NR   IP E LV   M + +H  ++  +V+  ++ L D G +
Sbjct:  551 DGFKRYVQHHKPNGDFHWGVKRRSQPELTSITTVEEKDCGIQTESSRVLKLPREIKELQQYVSSFHRIRYPHRRLSHV--NYLSTLVIETSTFSQRGSIEI--RCNVYQAMVLFLFQTENRRLSYRRMTERLISSKASSEDYDNEKVRIRQAVLSLTSQSWPLLVQHEGREGSSSKFSLNTAFYS-TQDLDIVQSYQDAYLFSLDRTDEWKVRQMIDPVVMNFVS------GNRH--IPREALVSKMMQEWLHPLITEDFVRRVVQQLTDAGRI 811
The following BLAST results are available for this feature:
BLAST of Gchil1373.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ73_9FLOR8.460e-2430.66CULLIN_2 domain-containing protein n=1 Tax=Gracila... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.230.130Cullin; Chain C, Domain 2coord: 117..273
e-value: 4.4E-8
score: 34.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..412
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..418
IPR036317Cullin homology domain superfamilySUPERFAMILY75632Cullin homology domaincoord: 124..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004414_piloncontigtig00004414_pilon:49785..51189 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1373.t1Gchil1373.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004414_pilon 49785..51189 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1373.t1 ID=Gchil1373.t1|Name=Gchil1373.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=435bp
MHHRKTETIMESFAFLSETFLSKAETVYGTVHNYFQRLEYDDESLSVNVN
NETELPDDSLDPLKSEMNPSWGLRFVDRDDRFSDFIQHHTPDGSIYRGPP
ITGIHLTSVTAVEGDILDPECFHQRLRLPSEICQIHRFAASYYKSLYPFR
KLSPTPCNDLSTDHISTSFFSEKISMPVSFKANLYQACVLKFFEEYESGT
YLQIRRIPLASNNVHEESKQENIRVRQALLSLSTELAPVLIRTRVKKDAR
FSFRLNDRWNPYASSIDLASMYRDLYISSLDRRQERRIRRLVEIEILKTF
SKDQRTAQNREAPIPVEYLVETTMNQNIHDSLSVPYVQMCLKGLVDRGEV
DISRMEFLAHSISSDSSDDFEQNVVYVYRPRHSVFDILVSDSDDYEDNYS
SSSGTSEAPTSEAPLSDDHEQKVIAMYRPWRSIY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036317Cullin_homology_sf