Gchil5639.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5639.t1
Unique NameGchil5639.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length356
Homology
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BLAST of Gchil5639.t1 vs. uniprot
Match: A0A2V3J4M7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4M7_9FLOR)

HSP 1 Score: 253 bits (646), Expect = 5.940e-78
Identity = 168/345 (48.70%), Postives = 205/345 (59.42%), Query Frame = 0 
Query:   30 PRRTNSPSPPHK---QTTQHLFEPHTSDISDSASNDANPSPSNPDLVFIDDVPHIKFCNVGEEEEPLIPDLSTPYFSKPSTKLSSNDPLNNLSLQNEQLAQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNRQHDDIRAKFSRRIRHLEAQLHSVN---STTTSRSRTSNQ--------PILDTQSHQLPSR-------AFDRVQSLGSVSESSRRRSIRMSAIPVPPTNPQRRALEGDTNVASPASRARQSLIRRAFVAHIHAHRYRNARQAWVQFLKADHRQVTLSTFSGCVRELAVAAEASDRELQLQMQEICEVPVGPGTVMTWNMFVRFYNNTKND 353
            P   + P PP K     T  L + HTSD+SDS SN+   SP   DL+FIDDVPHIK  NVGEEEEPLIPD ++  F+ P +   SN   + +   N++L QE                               L RQ  D R+K + RIR LE++L S     ST T  SRT+          P      ++LP         AF+RVQS GSV+ES+RRRS+R SA     T   RR ++ DT+VASPA+RARQSLIRRAFVAHIHA +YR ARQAW+QFL A  + V LS+F+ CVR LAVAAEASDRELQL MQEICEVPV   TVMTW MF RFY++T+ +
Sbjct:   44 PHAPSRPQPPQKLPHNPTNPLLDAHTSDVSDSTSNEPTSSPD-ADLLFIDDVPHIKISNVGEEEEPLIPDNASS-FNVPLSSEQSNLSQHAMRSHNDRLLQENRSLQTQNSQLQSELDAHRARASTTSAELLSLTRQLADTRSKLNNRIRQLESELASATCATSTCTHHSRTARTRASVPSPVPTSPRTPNELPPSQPSTNHLAFNRVQSTGSVAESTRRRSVRHSASLRNST--VRRVMDADTSVASPATRARQSLIRRAFVAHIHAQKYRTARQAWIQFLGAHRQAVELSSFAACVRGLAVAAEASDRELQLLMQEICEVPVSQHTVMTWAMFSRFYDSTRKE 384
The following BLAST results are available for this feature:
BLAST of Gchil5639.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J4M7_9FLOR5.940e-7848.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..170
NoneNo IPR availableGENE3D6.10.250.3110coord: 110..194
e-value: 6.6E-5
score: 25.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..72

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:346625..347692 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5639.t1Gchil5639.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 346625..347692 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5639.t1 ID=Gchil5639.t1|Name=Gchil5639.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=356bp
MSLPPATRRRFLSRSSSRPPRRVFARLSQPRRTNSPSPPHKQTTQHLFEP
HTSDISDSASNDANPSPSNPDLVFIDDVPHIKFCNVGEEEEPLIPDLSTP
YFSKPSTKLSSNDPLNNLSLQNEQLAQENETLLRKNAALQAELDSIRSKA
TTLSSELATLNRQHDDIRAKFSRRIRHLEAQLHSVNSTTTSRSRTSNQPI
LDTQSHQLPSRAFDRVQSLGSVSESSRRRSIRMSAIPVPPTNPQRRALEG
DTNVASPASRARQSLIRRAFVAHIHAHRYRNARQAWVQFLKADHRQVTLS
TFSGCVRELAVAAEASDRELQLQMQEICEVPVGPGTVMTWNMFVRFYNNT
KNDTT*
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