Gchil1416.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1416.t1
Unique NameGchil1416.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length252
Homology
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BLAST of Gchil1416.t1 vs. uniprot
Match: A0A2V3IZV5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZV5_9FLOR)

HSP 1 Score: 249 bits (635), Expect = 1.050e-79
Identity = 121/227 (53.30%), Postives = 151/227 (66.52%), Query Frame = 0 
Query:   23 SQAQPDKCFIELSR-ILGRGALNRFSLVCKSSERVAKSFAFGATIPLDLDTVARSNATIKCVQNTQHDLTLWCNTLNSTQFERRARHVLDRCQTHFGDIDESEQGIQPFTFVRDSCTSKFAWADSGRVTNVAWVCECQQFGFYEVVPGWADIRITGSQMESANEFEAIRICAEDAVEQMEQVCTNNPGDYYILALHIMQTCCKRFRSNTDLKFECAAIVPGDLSLLK 248
            S    ++CFIEL+R I+G G+ NR+SL+CK + +VAK F      P +  T  +S AT+ C+   +  LT  CN LN T+F+R A  VLDRC  H     E  +  QPFTF  + C+SK AW    RVT+VAWVCEC QF FYEV PGWA   + G  +++A EF AIR CAE+A EQM++VC NNP DYYIL LHI+QTCCKR R N++ KFECAA VP DLS LK
Sbjct:   22 SSRSSEQCFIELARVIIGLGSRNRYSLLCKCAPQVAKVFFSVPVAPGE--TAGKSEATVNCIAREERRLTSMCNRLNETEFQRHAFPVLDRCVNHPILTSEEAEATQPFTFNTEKCSSKVAWTQGTRVTSVAWVCECSQFDFYEVTPGWAKYDLRGDAIDAAQEFTAIRRCAEEATEQMQEVCKNNPSDYYILGLHILQTCCKRARVNSEPKFECAAAVPDDLSQLK 246
The following BLAST results are available for this feature:
BLAST of Gchil1416.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZV5_9FLOR1.050e-7953.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..251
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004414_piloncontigtig00004414_pilon:851688..852443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1416.t1Gchil1416.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004414_pilon 851688..852443 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1416.t1 ID=Gchil1416.t1|Name=Gchil1416.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=252bp
MAKAMHLTVVLCFLSFVVLVRKSQAQPDKCFIELSRILGRGALNRFSLVC
KSSERVAKSFAFGATIPLDLDTVARSNATIKCVQNTQHDLTLWCNTLNST
QFERRARHVLDRCQTHFGDIDESEQGIQPFTFVRDSCTSKFAWADSGRVT
NVAWVCECQQFGFYEVVPGWADIRITGSQMESANEFEAIRICAEDAVEQM
EQVCTNNPGDYYILALHIMQTCCKRFRSNTDLKFECAAIVPGDLSLLKLF
L*
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