Gchil2875.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2875.t1
Unique NameGchil2875.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length499
Homology
BLAST of Gchil2875.t1 vs. uniprot
Match: A0A2V3IHG6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG6_9FLOR)

HSP 1 Score: 609 bits (1571), Expect = 2.130e-213
Identity = 316/498 (63.45%), Postives = 381/498 (76.51%), Query Frame = 0
Query:    1 MPPPRKRPRTQSISAKRPPAAPRLSRSHPSAADDNSRPRTLIDLLGPNSSRAEQVLGDDAPNDAWSVLANTVDNLTSHSGQPVPRAAPHADDTHPTNAAEVQETPHEQLPMDLSIKTSLSIMSSKSLWWTRVRGQGEEYEALHDLLSGVDTITEAPVIKPPLGSDAVIEGQVLTDTLTCAKRQFYRALLHFRYPCTTLPPVISRRWQTVFAASTRARPDSALQEAANVALERLRLWQSALQSLFFGYKRGHIDHFYILLPSTTLLFSHTFPQNDSLNIRNGTNCQKRRGQMCSTSDSSLQACFANGSLGLRSLLSDYAVPFRLERDSNSSVGDSEPPVIAQGQLAVQAVYNFVLSVGHKISNATDVPVLLCDKPFRGGTAITAQVADADEANIINSSGGATRLRYSVKITGFLTPRQVRAICKALVETQDRDFSVQMSTEARSEMLNVCGQSISLLPASGTSSSQQKSYHSILGRRVLSRVTRKTTSPNFMLFTRAVE 498
            M PPRKRPRTQ ISAKRPP  PR +RS P+  D+NSRPRTL+DLLG +SSRAEQVLGD+AP+DAWSVLANT+DNL S S Q     + H+    P +A ++QE  +E LP+DLSIKT+++++SS+SL WT +RGQ EEYEAL DLLS VD + +A   KPPLG+DAV      ++    AKR FYRALLHFRYPCTTLPPVISRRWQ+VF  ++RA PDSALQEA +VA+ERLRLWQSALQSLFFGYKRGHIDHFY++LPST LLFSH    N    +RNG +  +R     ST++ +L+ACFA GS GLRSLLSDYAVPF++E  S+ + G+++P V+A+G LAVQAVYNF L+VGHKISNATDVP+LLCDKPFRGGTA++AQV D DE N+I+S GG TRLRYSVK+ G LTPRQ+ AICKA V TQD D+SVQ+ TE RSEMLNV    I  L    + +S Q     + GRRVLSR+     S NF L+TRAVE
Sbjct:   46 MSPPRKRPRTQPISAKRPPPPPRQTRSRPAPQDENSRPRTLVDLLGRSSSRAEQVLGDNAPSDAWSVLANTLDNLPSESRQ----NSTHSHQPAPPSAPDLQEPSNEHLPLDLSIKTAITVISSRSLAWTTIRGQAEEYEALRDLLSDVDALVDAEPTKPPLGTDAVAHSHPPSEPFIRAKRLFYRALLHFRYPCTTLPPVISRRWQSVFNPTSRATPDSALQEATHVAMERLRLWQSALQSLFFGYKRGHIDHFYVILPSTALLFSHAVVHNQPRPVRNGRSHHRRGTHSHSTTELTLRACFAKGSPGLRSLLSDYAVPFKIEHGSDRTGGETDPCVVAEGVLAVQAVYNFALAVGHKISNATDVPILLCDKPFRGGTAMSAQVTDVDETNVIDSHGGPTRLRYSVKVNGLLTPRQLTAICKAFVATQDHDYSVQLKTEPRSEMLNVSEHLIGQLNNIASGNSYQPPSTRVQGRRVLSRIVAAAGSRNFSLYTRAVE 539          
BLAST of Gchil2875.t1 vs. uniprot
Match: R7QQV4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQV4_CHOCR)

HSP 1 Score: 268 bits (684), Expect = 5.250e-80
Identity = 195/534 (36.52%), Postives = 280/534 (52.43%), Query Frame = 0
Query:    3 PPRKRPRTQSISAK--RPPAAPRLSRSH--------PSAAD-DNSRPRTLIDLLGPNSSRAEQVLGDDAPNDAWSVLANTVDNLTSHSGQPV-------PRAAPHADDTHPTNAAE----VQETPHEQLPMDLSIKTSLSIMSSKSLWWTRVRGQGEEYEALHDLLSGVDTITEAPVIKPPLGSDA--------VIEGQ--VLTDTLTCAKRQFYRALLHFRYPCTTLPPVISRRWQTVFAASTRAR-PDSALQEAANVALERLRLWQSALQSLFFGYKRGHIDHFYILLPSTTLLFSHTFPQNDSLNIRNGTNCQKRRGQMCSTSDSSLQACF----ANGSLGLRSLLSDYAVPFRL-ERDSNSSVGDSEPPVIAQGQLAVQAVYNFVLSVGHKISNATDVPVLLCDKPFRGGTAITAQVADADEANIINSSGGATRLRYSVKITGFLTPRQVRAICKALVETQDRDFSVQMSTEARSEMLNVCGQSISLLPASGTSSSQQKSYHSIL---GRRVLSRVTRKTTSPNFMLFTR 495
            P RKRPRTQ+ + K  RPP   R S            S AD   +   TL DL+G   SRAEQ LG++APN+ W+   NT+DN+ S S  P         +    AD    +   E    V E   +Q+PMDL++K  + ++S  +L W   RGQG+EY AL  L +G  +        P   +D         V++ +  V  D L   K+  Y+ALLHFR P  +LP VIS RWQ + +   RA   + AL +    A+ RL  WQSA QSL+FGY+ GHI  FY+LL +TT+LF+   P         G+  ++R   M S+++ +  +CF    A  S GLR+L+S++ VPF L ER S+      +P V+ +G  A+ A++NF+LS G  ISNA DVP+L+CDKPFRG T  +A+V +A +  I    G     RY+++++G  TP Q+  +C +L + Q  +F+ + +T+    MLN  G         G SS   ++    L   G   LSRV   +T   F + TR
Sbjct:   11 PTRKRPRTQNSATKGKRPPLGNRHSNGRLSQIRVEMDSVADIREANMPTLTDLIGGGRSRAEQFLGEEAPNNIWASFGNTLDNMGSLSNLPTVIGNDDASKVVYDADSRAFSEQLERDENVSERKFDQIPMDLTLKRKVDVVSKSTLRWALRRGQGDEYGALAKLTNGKSSTANDERQDPVSRNDRNRLEDDSNVLQARSNVDEDVLNW-KKCLYKALLHFRCPGESLPKVISSRWQVLTSNYGRASWQEHALHDEKKFAVHRLINWQSAFQSLYFGYRHGHIPDFYVLLQTTTVLFNRGKPWA-------GSKKRRRSTAMVSSANDNQSSCFRASVAKASTGLRALMSEHEVPFTLVERPSSFE----DPGVVVEGDFAIHALFNFLLSRGPGISNADDVPLLVCDKPFRGSTIYSAEVLNARQMLIPGKPGEQPEHRYTMQLSGLFTPGQISDVCNSLAKIQRGEFAARFNTDEAGNMLNSFGHG-------GDSSDGDEAEEDKLRLRGPLFLSRVQMDSTQNGFSVTTR 525          
BLAST of Gchil2875.t1 vs. uniprot
Match: A0A1U8AKJ3_NELNU (protein downstream neighbor of Son n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AKJ3_NELNU)

HSP 1 Score: 68.9 bits (167), Expect = 1.090e-8
Identity = 90/393 (22.90%), Postives = 158/393 (40.20%), Query Frame = 0
Query:  105 PHEQLPMDLSIKTSLSIMSSKSLWWTRVRGQGEEYEALHDLLSGVDTITEAPVIKPPLGSDAVIEGQVLTDTLTCAKRQFYRALLHFRYPCTTLPPVISRRWQTVFAASTRARPDSALQEAANVALERLRLWQSALQSLFFGYKRGHIDHFYILLPSTTLLFSHTFPQNDSLNIRNGTNCQKRRGQMCSTSDSSLQACFANGSLGLRSLLSDYAVPFRL----------------------ERD--------SNSSVGDSEPPVIA-QGQLAVQAVYNFVLSVGHKISNAT--DVPVLLCDKPFRGGTAITAQV---------------ADADEANIINSSGGATRLRYSVKITG-FLTPRQVRAICKALVETQDRDFSVQMSTEARSEMLNV 448
            P  + P+DL++KT++ ++SS  + W      G  Y  +    S      +  V                  +L  A+  + +AL  + YP ++LPP+I        +A T A         A+  L+R   W+ + QSL++  +R   D FY+      ++F+             G +   R  ++C+       A  +  + GLRSLL ++ + F +                      +R+        S S V +S   ++A  G   V  +Y+F+L+    +S+ T  DVP+L    PF+  +  + +V               ++ +E N    S   T   YS+++   FL P  +  IC A+  ++ R F    +TEA S  LNV
Sbjct:  240 PGSKTPLDLTLKTTVRLVSSSPVNWCHRVTPGSSYNLMAQFTSRFGCSGDHDV----------------RQSLETAQALYSKALHSWVYPQSSLPPLI-------ISALTSAAAQGG---EADFLLKRQLAWEDSFQSLYYMLRRRICDIFYVCTSQFVVMFT-------------GADYPGRTNRLCN-------AYISQSTRGLRSLLREHDICFSMPLCRSEVEQANVEDLVELSEIEKRNVGQARRLVSISDVDNSPQSLLAFSGNDNVHGLYDFLLNYRSILSSLTGLDVPLLYSPVPFQNASLCSPEVRCREMKRVDTVSCRGSNMEEGNFCQDS--RTGFCYSIEVKDTFLPPWIISGICAAM-GSEGRSFEASFTTEAISIGLNV 583          
The following BLAST results are available for this feature:
BLAST of Gchil2875.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IHG6_9FLOR2.130e-21363.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQV4_CHOCR5.250e-8036.52Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1U8AKJ3_NELNU1.090e-822.90protein downstream neighbor of Son n=1 Tax=Nelumbo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..106
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..58
NoneNo IPR availablePANTHERPTHR12972:SF0PROTEIN DOWNSTREAM NEIGHBOR OF SONcoord: 64..452
IPR024861DonsonPANTHERPTHR12972DOWNSTREAM NEIGHBOR OF SONcoord: 64..452

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004406_piloncontigtig00004406_pilon:1042777..1044273 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2875.t1Gchil2875.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004406_pilon 1042777..1044273 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2875.t1 ID=Gchil2875.t1|Name=Gchil2875.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=499bp
MPPPRKRPRTQSISAKRPPAAPRLSRSHPSAADDNSRPRTLIDLLGPNSS
RAEQVLGDDAPNDAWSVLANTVDNLTSHSGQPVPRAAPHADDTHPTNAAE
VQETPHEQLPMDLSIKTSLSIMSSKSLWWTRVRGQGEEYEALHDLLSGVD
TITEAPVIKPPLGSDAVIEGQVLTDTLTCAKRQFYRALLHFRYPCTTLPP
VISRRWQTVFAASTRARPDSALQEAANVALERLRLWQSALQSLFFGYKRG
HIDHFYILLPSTTLLFSHTFPQNDSLNIRNGTNCQKRRGQMCSTSDSSLQ
ACFANGSLGLRSLLSDYAVPFRLERDSNSSVGDSEPPVIAQGQLAVQAVY
NFVLSVGHKISNATDVPVLLCDKPFRGGTAITAQVADADEANIINSSGGA
TRLRYSVKITGFLTPRQVRAICKALVETQDRDFSVQMSTEARSEMLNVCG
QSISLLPASGTSSSQQKSYHSILGRRVLSRVTRKTTSPNFMLFTRAVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024861Donson