Gchil5636.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5636.t1
Unique NameGchil5636.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length542
Homology
BLAST of Gchil5636.t1 vs. uniprot
Match: A0A2V3J3W5_9FLOR (APH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3W5_9FLOR)

HSP 1 Score: 433 bits (1113), Expect = 1.560e-143
Identity = 230/500 (46.00%), Postives = 316/500 (63.20%), Query Frame = 0
Query:   38 LTFHILILNNSRDSVLASVISDSQLRLPFVRPPLHQLYYMNVPVPRMYQLHHWEVESCALEHFIHAQLHIRFHLLQTIGYYPSDFTRRSRHQPLES-HVLLLGVIEDFRLSDPQLRWVKRRQLSRFKWANILQGVCLESQIDTMLQNINHNPLLIQSAPWLWNDGVNAVHAWARRALKEQQLIPITPFHLICKSGECCVFRCTVRRFNQNHKQRKICSAFD---VFIKAVRSPSQEPLRTASISTLLSSFVPRVLAVDGKCNAMIQKSAGTPLDASIDLSALTDTLYRMQISSINHVSELTACGLQTLDSRWLSANFDSILRRPAIVSMQRYPDVQRDIIYIRSKLALVRELCEEVLKVSIPNVLVHGDLRIHNIASVKCDFRERICFFDWASSFIGHPFYDLRTLLENQS-NLSLMNINKNREEHDTEPHVTQYLKSWMPQGSLADLRHVYDHMDILRFGIELHLLTQLYDFYKDIERRKLIPRIHSEIRGLVIMLEDF 532
            LTFH LI+N+++D+VLA+  +D++L LPFVRPPL Q+ YMNVP   +Y  HHWEVES  LEHF+  +L I  H+LQT+  +   +TR +   P++  HV+LL V+     S P + WV+R  LS  +W   L  + + +QI+ +   + ++      APW W     ++ +W  R L    ++P+T    +CK+GE CV  C V   + +H   +  S      +F+KAV S S EP+RT  I+  L SFVP+VLAVD   N ++ +SAG   DA  D   L +T+ +  +SS+ H+ +    GLQ LDS+WLSANF SI+  PA+ +M+ YPDV+RDI YIRSKLALV+ELC ++  +++P  LVHGD R+HNI +   + R    FFDW S+F+GHPFYDLRTLLE    N +    ++N    D +  + QYL SW    S+ADLR  Y+ MDILR GI L+ LT LYD Y  IERRKLIPRIHSEI+GL IMLE+F
Sbjct:   30 LTFHFLIINDAKDAVLANTSNDNKLMLPFVRPPLRQIRYMNVPSSSLYDSHHWEVESSNLEHFVQTELTIPLHILQTLRCH--HYTRPT--DPIQQRHVILLAVLHHRIPSHPSITWVQRNSLSTLEWDTSLLRIDVNAQIEAVFNQLANHLHFANPAPWYWLSWQYSIQSWLNRRLAHSNMLPVTSLAPVCKTGEACVLWCRVAPLHLSHTSHRRNSRHSHHRLFLKAVHSQSHEPVRTVIIAHTLPSFVPQVLAVDEHRNVIVMQSAGHLNDAPFDQKLLINTMAQFHLSSMKHLHKFQRSGLQLLDSKWLSANFHSIMHHPALTAMECYPDVRRDINYIRSKLALVQELCADISNLNLPCTLVHGDFRLHNIGARVQEGRCVYRFFDWGSAFVGHPFYDLRTLLEFDGINNASSGYSENSVHLDVDACLVQYLASWKSYASMADLRRTYELMDILRNGISLYNLTLLYDAYSGIERRKLIPRIHSEIKGLHIMLEEF 525          
BLAST of Gchil5636.t1 vs. uniprot
Match: R7Q9W5_CHOCR (APH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9W5_CHOCR)

HSP 1 Score: 105 bits (263), Expect = 2.960e-20
Identity = 90/343 (26.24%), Postives = 160/343 (46.65%), Query Frame = 0
Query:  197 LWNDGVNAVHAWARRALKEQQLIPITPFHLICKSGECCVFRCTVRRFNQNHKQRKICSAFDVFIKAVRSPSQEPLRTASISTLLSSFVPRVLAVDGKCNAMIQKSAGTPLDASIDLSALTDTLYRMQISSINHVSELTACGLQTLDSRWLSANFDSILRRPAIVSMQRYPDVQRD---IIYIRSKLALVRELCEEVLKVSIPNVLVHGDLRIHNIASVKCDFRE--RICFFDWASSFIGHPFYDL--RTLLENQSNLSLMNINKNREEHDTEPHVTQYLKSWMPQGSLADLRHVYDHMDILRFGIELHLLTQLYDFYKDIERRKLIPRIHSEIRGLVIMLEDF 532
            +   G+N +    ++  K    +      L CK  + C+    V+ +  +           +++KA      EP  T ++S  L  FVP++LAVDG  NAM+Q  A   L+ S D  A+   L  + ISSI H+  L A G+      W+S+N  +IL+ P +       D+ RD   +  +R+++  ++++C  +L+ +IP+ LVHGD    + A++K    E  R+CF DWA+  I  PF+DL   TL ++ S+    N  KN +E         Y ++W        +   +  +  +     L +L   Y+  + +E+R L+  +   +  +   L+ +
Sbjct:   42 IMRHGMNVIGRLTQKRNKAYSTV------LSCKVDKICLNSTPVQNWRHDGS---------IYLKASHPSVPEPKLTLTVSATLPGFVPKILAVDGSRNAMLQIGA-QHLEYS-DPKAVMAMLANLHISSIQHIDVLRAGGVPYRGLPWISSNIANILQHPVL-------DLCRDKETLNSLRNRVDELQDICSVLLRYNIPDTLVHGDC---SEANMKRGLEEENRLCFIDWANCCIAPPFFDLYRMTLEDSWSD----NAFKNSKE--------SYFETWTGFACQWKMAEAFLLISPIFMCYNLSVLLATYEMLEPVEQRSLVQILEDRVGYICETLDQY 345          
BLAST of Gchil5636.t1 vs. uniprot
Match: A0A3D4NBS3_9CHLR (APH domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=A0A3D4NBS3_9CHLR)

HSP 1 Score: 59.3 bits (142), Expect = 6.950e-6
Identity = 59/225 (26.22%), Postives = 96/225 (42.67%), Query Frame = 0
Query:  269 EPLRTASISTLLSSFVPRVLAVDGKCNAMIQKSAGTPLDASIDLSALTD-------TLYRMQISSINHVSELTACGLQTLDSRWLSANFDSILR-RPAIVSMQRYPDVQRDIIYIRSKLALVRELCEEVLKVSIPNVLVHGDLRIHNIASVKCDFRERICFFDWASSFIGHPFYDLRTLLENQSNLSLMNINKNREEHDTEPHVTQYLKSWMPQGSLADLRHVYD 485
            EP     +S    + V  VL +D +   ++    G+ L   ++ +   D          R Q S I H  EL A G+     + L    ++++  R A+   Q       D   ++S +  ++ LC+++ +  IP  L H D    NI   +  F+    FFDWA SFI HPF+ L   L + +    ++  ++ E H+ E   T YL  W   G+L  L    D
Sbjct:   71 EPQLAWQLSLWQPNLVQPVLEIDARRGWLLMPDGGSTLRQVLENNPSLDYWKKILPAYARFQQSLIPHRQELLALGVVNRGLQVLPRLANNLVEDRDAMCIGQTDGLSSGDYELLKSLMPKLQNLCDKLARFGIPETLQHDDFHDGNIFMGQDGFK----FFDWAESFITHPFFTLVVTLRSIAYRFELD-EQSPELHELE---TLYLMEWQEYGTLDHLGKALD 287          
The following BLAST results are available for this feature:
BLAST of Gchil5636.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3W5_9FLOR1.560e-14346.00APH domain-containing protein n=1 Tax=Gracilariops... [more]
R7Q9W5_CHOCR2.960e-2026.24APH domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A3D4NBS3_9CHLR6.950e-626.22APH domain-containing protein n=3 Tax=Bacteria Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.1200.10coord: 322..497
e-value: 1.2E-7
score: 33.6
IPR002575Aminoglycoside phosphotransferasePFAMPF01636APHcoord: 355..442
e-value: 9.2E-7
score: 28.9
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 207..511

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:340065..341690 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5636.t1Gchil5636.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 340065..341690 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5636.t1 ID=Gchil5636.t1|Name=Gchil5636.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=542bp
MTSEQPFTALSADPPSRQHDAIPERAQLLSLHASAPQLTFHILILNNSRD
SVLASVISDSQLRLPFVRPPLHQLYYMNVPVPRMYQLHHWEVESCALEHF
IHAQLHIRFHLLQTIGYYPSDFTRRSRHQPLESHVLLLGVIEDFRLSDPQ
LRWVKRRQLSRFKWANILQGVCLESQIDTMLQNINHNPLLIQSAPWLWND
GVNAVHAWARRALKEQQLIPITPFHLICKSGECCVFRCTVRRFNQNHKQR
KICSAFDVFIKAVRSPSQEPLRTASISTLLSSFVPRVLAVDGKCNAMIQK
SAGTPLDASIDLSALTDTLYRMQISSINHVSELTACGLQTLDSRWLSANF
DSILRRPAIVSMQRYPDVQRDIIYIRSKLALVRELCEEVLKVSIPNVLVH
GDLRIHNIASVKCDFRERICFFDWASSFIGHPFYDLRTLLENQSNLSLMN
INKNREEHDTEPHVTQYLKSWMPQGSLADLRHVYDHMDILRFGIELHLLT
QLYDFYKDIERRKLIPRIHSEIRGLVIMLEDFATSTVESTM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002575Aminoglycoside_PTrfase
IPR011009Kinase-like_dom_sf