Gchil1583.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1583.t2
Unique NameGchil1583.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length245
Homology
BLAST of Gchil1583.t2 vs. uniprot
Match: A0A2V3J3C9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3C9_9FLOR)

HSP 1 Score: 357 bits (917), Expect = 3.700e-119
Identity = 174/242 (71.90%), Postives = 206/242 (85.12%), Query Frame = 0
Query:    1 MVTAIKESKDEFVLEIGGLVNLEDNDPNDYTIQERDFGFSTCANLNYTRMTRREFSIRIIAMNSRLDIRGLARAIIAYLNEEVP--FPDDSGVYRSYNAVDLMAEVFFSGTVDSDEHPDQVIGQFERMQVRVREKEQDITVLYSSAIVLIVVVAVAALSGIVTNVFIDNQGRDITSVAWTLGVVRSHYERLGRCWNKTPDTTTYWVQVRDGSSTHFGPEGYGAIAQAGDGVRNEDITGCTTL 240
            M TAI+E KD F +EIGGLVNLE +DPNDYTI ERD+G STC +LNYTRMTRREFSI++ AMN++LD+RGLARA+IAY+N++ P  +P+DSGVYR YNAVDL  ++FFSG ++SDE  +QVIGQF+RMQVRVR KE+++TVL  SA VL  VVAVAAL+GI+TN FIDN GRD+TSVAWTLGVVRSHYE LGRCWNKTPD TTYWVQVR+G STHFGP GYG I QAGD V++ DITGC  +
Sbjct:  250 MATAIEEDKDRFEIEIGGLVNLEYDDPNDYTILERDYGTSTCIDLNYTRMTRREFSIKVTAMNTKLDVRGLARAVIAYMNDKTPHPYPEDSGVYRPYNAVDLFTDIFFSGEIESDEDTEQVIGQFDRMQVRVRGKEREVTVLSLSATVLAAVVAVAALAGILTNAFIDNHGRDVTSVAWTLGVVRSHYENLGRCWNKTPDVTTYWVQVREGWSTHFGPIGYGHIVQAGDDVKDGDITGCNPV 491          
BLAST of Gchil1583.t2 vs. uniprot
Match: A0A2V3IG70_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG70_9FLOR)

HSP 1 Score: 282 bits (721), Expect = 9.000e-90
Identity = 140/234 (59.83%), Postives = 180/234 (76.92%), Query Frame = 0
Query:    1 MVTAIKESKDEFVLEIGGLVNLEDNDPNDYTIQERDFGFSTCANLNYTRMTRREFSIRIIAMNSRLDIRGLARAIIAYLNEEVPFPDDSGVYRSYNAVDLMAEVFFSGTVDSDEHPDQVIGQFERMQVRVREKEQDITVLYSSAIVLIVVVAVAALSGIVTNVFIDNQGRDITSVAWTLGVVRSHYERLGRCWNKTPDTTTYWVQVRDGSSTHFGPEGYGAIAQAGDGVRNEDI 234
            M TAIK+ ++E  LEIGGLVNLEDND NDY+I  RD+G STCA LNYTRMTRREFS+ + A+NS+LD + +ARA+ +YL + VP     GVYR+Y+AVD+M E+F+SG +DSDE   Q IGQFE+MQVR+R + +++TV   SA+V   +V   A++ +++ V I+N GRD+TSVAWTLGVVRSHYE LGRCWN TPD TT+WVQ +D  +THFGP+G G + Q  D VRNEDI
Sbjct:  250 MSTAIKKGENEIELEIGGLVNLEDNDTNDYSIGYRDYGTSTCAELNYTRMTRREFSVTLTALNSKLDFKNIARALSSYL-DYVPH----GVYRNYDAVDIMTELFYSGEIDSDEDGSQTIGQFEQMQVRLRGEARNVTVFSMSALVTTAIVLATAVAALLSTVLINNHGRDMTSVAWTLGVVRSHYENLGRCWNGTPDATTFWVQKKDELTTHFGPKGCGTVVQKSDHVRNEDI 478          
BLAST of Gchil1583.t2 vs. uniprot
Match: A0A2V3IK59_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK59_9FLOR)

HSP 1 Score: 261 bits (667), Expect = 6.820e-83
Identity = 133/234 (56.84%), Postives = 176/234 (75.21%), Query Frame = 0
Query:    1 MVTAIKESKDEFVLEIGGLVNLEDNDPNDYTIQERDFGFSTCANLNYTRMTRREFSIRIIAMNSRLDIRGLARAIIAYLNEEVPFPDDSGVYRSYNAVDLMAEVFFSGTVDSDEHPDQVIGQFERMQVRVREKEQDITVLYSSAIVLIVVVAVAALSGIVTNVFIDNQGRDITSVAWTLGVVRSHYERLGRCWNKTPDTTTYWVQVRDGSSTHFGPEGYGAIAQAGDGVRNEDI 234
            M TAIK+ ++E  LEIGGLVNLEDND NDY+I  RD+G STCA LNYTRMT REFS+ + A+NS+LD + +ARA+ +YL + VP     GVYR+Y+AVD+M E+F+SG  ++DE   Q IGQFE+MQV++R + + +TV   SA+V   +V   A++ +++ V I+N GRD+TSVAWTLGVVRSHYE LGRCWN TPD TT+WVQ +   +THFGP+G G + Q  + VRNE+I
Sbjct:  152 MSTAIKKGENEIELEIGGLVNLEDNDTNDYSIGYRDYGTSTCAELNYTRMTWREFSVTLTALNSKLDFKNIARALSSYL-DYVPH----GVYRNYDAVDIMTELFYSG--ENDEDGSQTIGQFEQMQVQLRGEARKVTVFSMSALVTTAIVLATAVAALLSTVLINNHGRDMTSVAWTLGVVRSHYENLGRCWNGTPDATTFWVQKKYEPTTHFGPKGCGTVVQKSNHVRNENI 378          
The following BLAST results are available for this feature:
BLAST of Gchil1583.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J3C9_9FLOR3.700e-11971.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG70_9FLOR9.000e-9059.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IK59_9FLOR6.820e-8356.84Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..165
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 166..244
NoneNo IPR availableTMHMMTMhelixcoord: 139..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1062125..1062859 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1583.t2Gchil1583.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1062125..1062859 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1583.t2 ID=Gchil1583.t2|Name=Gchil1583.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=245bp
MVTAIKESKDEFVLEIGGLVNLEDNDPNDYTIQERDFGFSTCANLNYTRM
TRREFSIRIIAMNSRLDIRGLARAIIAYLNEEVPFPDDSGVYRSYNAVDL
MAEVFFSGTVDSDEHPDQVIGQFERMQVRVREKEQDITVLYSSAIVLIVV
VAVAALSGIVTNVFIDNQGRDITSVAWTLGVVRSHYERLGRCWNKTPDTT
TYWVQVRDGSSTHFGPEGYGAIAQAGDGVRNEDITGCTTLRQAE*
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