Gchil5757.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5757.t1
Unique NameGchil5757.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length205
Homology
BLAST of Gchil5757.t1 vs. uniprot
Match: A0A2V3IRX7_9FLOR (40S ribosomal protein S8 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX7_9FLOR)

HSP 1 Score: 358 bits (919), Expect = 2.340e-124
Identity = 180/204 (88.24%), Postives = 198/204 (97.06%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGCIIQIDATPFRRYYHNYYGIDIGKKKAGENEREKISEXXXXXXXXRAADRLPLDDGVKELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKKKSGK 204
            MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPA TKLG+KLVRPVRVRGGN+KMRALR+ETGNFAWGSEG+AHK+RILNVVYNASNNELVRTNTLVKGC++QIDATPFR+YYHN+YGID+GKKKAG+NE +KI  XXXXXXXX AADRLPLD+GV+ELFQSGRLLASLSSRPGQCGRADGY+LEGKELEFY++ MQKKKK+GK
Sbjct:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAHTKLGSKLVRPVRVRGGNIKMRALRLETGNFAWGSEGIAHKTRILNVVYNASNNELVRTNTLVKGCVVQIDATPFRQYYHNFYGIDMGKKKAGDNEGDKIXXXXXXXXXXXAADRLPLDEGVRELFQSGRLLASLSSRPGQCGRADGYVLEGKELEFYSKAMQKKKKAGK 204          
BLAST of Gchil5757.t1 vs. uniprot
Match: R7QGG9_CHOCR (40S ribosomal protein S8 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGG9_CHOCR)

HSP 1 Score: 341 bits (875), Expect = 1.190e-117
Identity = 170/204 (83.33%), Postives = 182/204 (89.22%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGCIIQIDATPFRRYYHNYYGIDIGKKKAGENEREKISEXXXXXXXXRAADRLPLDDGVKELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKKKSGK 204
            MGISRDSRHKRRLTGGKHPYFRKKRK+ELGRQP+ TKLGTKLVRPVRVRGGNLKMRALR+ETGNF+WGSEG + KSRILNVVYNASNNELVRTNTLVKGCI+QIDATPFR+YYH +YGIDIGKKKAGE   E IS         RA  RL LD GV +LFQSGRLLASLSSRPGQCGRADGY+LEGKELEFYTR+MQKKKK+GK
Sbjct:    1 MGISRDSRHKRRLTGGKHPYFRKKRKFELGRQPSMTKLGTKLVRPVRVRGGNLKMRALRLETGNFSWGSEGFSGKSRILNVVYNASNNELVRTNTLVKGCIVQIDATPFRQYYHRHYGIDIGKKKAGEGAGEVISAKRAEKQKKRAEGRLELDQGVADLFQSGRLLASLSSRPGQCGRADGYLLEGKELEFYTRMMQKKKKAGK 204          
BLAST of Gchil5757.t1 vs. uniprot
Match: RS8_GRIJA (40S ribosomal protein S8 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=RS8_GRIJA)

HSP 1 Score: 319 bits (817), Expect = 8.160e-109
Identity = 160/204 (78.43%), Postives = 174/204 (85.29%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGCIIQIDATPFRRYYHNYYGIDIGKKKAGENEREKISEXXXXXXXXRAADRLPLDDGVKELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKKKSGK 204
            MGISRDSRHKRRLTGGKHPY  KKRKYELGRQPA TK+G KLVR VRVRGGNLK RALR+E+GNFAWGSE    KSRILNVVYNASNNELVRTNT VKGCIIQIDATPFR+YYHN+YGIDIGKKKAG+ E  K S+        R   RLPLD+G+KELFQSGRL AS++SRPGQ GRADGY+LEGKELEFY + MQKKKK+GK
Sbjct:    1 MGISRDSRHKRRLTGGKHPYTCKKRKYELGRQPAMTKIGGKLVRTVRVRGGNLKSRALRLESGNFAWGSEAFTSKSRILNVVYNASNNELVRTNTFVKGCIIQIDATPFRQYYHNHYGIDIGKKKAGDEE-SKFSKRHAGKQEKRCQTRLPLDEGIKELFQSGRLYASIASRPGQSGRADGYLLEGKELEFYAKAMQKKKKAGK 203          
BLAST of Gchil5757.t1 vs. uniprot
Match: A0A1X6P2M7_PORUM (40S ribosomal protein S8 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2M7_PORUM)

HSP 1 Score: 268 bits (686), Expect = 7.650e-89
Identity = 145/206 (70.39%), Postives = 165/206 (80.10%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGCIIQIDATPFRRYYHNYYGIDIGKKKAGENEREKISEXXXXXXXXRAADRLPLDDGVK--ELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKKKSGK 204
            MGISRDS+HKRRLTGGK P++RKKRK+ELGRQPA TKLG ++VRPVRVRGGNLK RALR+E GNFAW SE  A K+R+L VVYNASNNELVRTNTLVKG IIQIDATPFR++Y  +YG++IGKKKA E E      XXXXXXXX               +LFQSGRLLA +SSRPGQ GR DGY+LEGKELEFY + +QKKKK+GK
Sbjct:    1 MGISRDSKHKRRLTGGKQPFYRKKRKFELGRQPAMTKLGPQIVRPVRVRGGNLKQRALRLENGNFAWASEATARKTRVLTVVYNASNNELVRTNTLVKGAIIQIDATPFRQWYLQHYGVEIGKKKASEVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXDDLFQSGRLLARISSRPGQSGRCDGYLLEGKELEFYQKALQKKKKAGK 206          
BLAST of Gchil5757.t1 vs. uniprot
Match: A0A7S1EQ05_9RHOD (40S ribosomal protein S8 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQ05_9RHOD)

HSP 1 Score: 268 bits (685), Expect = 1.090e-88
Identity = 134/206 (65.05%), Postives = 164/206 (79.61%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGCIIQIDATPFRRYYHNYYGIDIGKKKA-GENEREKISEXXXXXXXXRA-ADRLPLDDGVKELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKKKSGK 204
            MGISRDS+HKRRLTGGK P FRKKRK+ELGRQ + TKLGTKLVRPVRVRGGN+K+RALR+E GNF+WGSE +  K+RIL VVYNASNNELVRTNTLVKGC++QIDA PF+ ++  +YG+++GKKK  G +  E++ +         A A+   +D  +++ F SGRL A +SSRPGQ GR DGY+LEGKELEFY R +QKKKKSGK
Sbjct:    1 MGISRDSKHKRRLTGGKQPLFRKKRKFELGRQASMTKLGTKLVRPVRVRGGNVKLRALRLENGNFSWGSEAITRKTRILGVVYNASNNELVRTNTLVKGCVVQIDAAPFKAWHLQHYGVEVGKKKGPGSDATEEVKKSKSVLKKLAARAEGHSVDRALEDEFVSGRLFAVVSSRPGQSGRCDGYVLEGKELEFYKRQLQKKKKSGK 206          
BLAST of Gchil5757.t1 vs. uniprot
Match: A0A5J4YIL6_PORPP (40S ribosomal protein S8 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YIL6_PORPP)

HSP 1 Score: 268 bits (684), Expect = 1.490e-88
Identity = 139/206 (67.48%), Postives = 162/206 (78.64%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGCIIQIDATPFRRYYHNYYGIDIGKKKAGEN--EREKISEXXXXXXXXRAADRLPLDDGVKELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKKKSGK 204
            MGISRDS+HKRRLTGGK  Y+RKKRK+ L RQPA TKLGTKLVRPVRVRGGN+K+R LR+ETGNF+W SE V+HK+R+L VVYNASNNELVRTNTLVKG I+QIDATPF+ +Y N+YG ++GKKK  E   E EK S+        RA   + +D  + E F SGRL A +SSRPGQ GR DGYILEGKELEFY + + KKKKSGK
Sbjct:    1 MGISRDSKHKRRLTGGKQAYYRKKRKFCLARQPAMTKLGTKLVRPVRVRGGNIKLRGLRLETGNFSWPSEAVSHKTRVLGVVYNASNNELVRTNTLVKGAIVQIDATPFKTWYLNHYGQELGKKKTPEEVGEVEKKSDAVLKKIAARAEGHV-MDRTLAEEFMSGRLYACVSSRPGQSGRCDGYILEGKELEFYKKQLMKKKKSGK 205          
BLAST of Gchil5757.t1 vs. uniprot
Match: A0A1Y1I5M7_KLENI (40S ribosomal protein S8 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I5M7_KLENI)

HSP 1 Score: 260 bits (665), Expect = 1.560e-85
Identity = 136/211 (64.45%), Postives = 161/211 (76.30%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGT-KLVRPVRVRGGNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGCIIQIDATPFRRYYHNYYGIDIGKKKAG----ENEREKISEXXXXXXXXRAADRLP---LDDGVKELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKKKSG 203
            MGISRDS HKRRLTGGK   +RKKRKYELGRQPA TKL + K VRPVRVRGG+LK RALR++TGNF+WGSE VA K+R+L+VVYNASNNELVRT TLVK  I+Q+DATPFR++Y  +YG +IGKKK      E E E+++E        + A R     LD  + E F  GRLLA++SSRPGQCGR DGYILEG+ELEFY+R +QKKK  G
Sbjct:    1 MGISRDSTHKRRLTGGKKKSWRKKRKYELGRQPAMTKLSSHKTVRPVRVRGGHLKFRALRLDTGNFSWGSEAVARKTRVLDVVYNASNNELVRTQTLVKNAIVQVDATPFRQWYAQHYGAEIGKKKGKTVKKEGEEEEVAEKKSAHVERKLAKRAEGQKLDPNLDEQFAGGRLLAAISSRPGQCGRCDGYILEGRELEFYSRKLQKKKSKG 211          
BLAST of Gchil5757.t1 vs. uniprot
Match: A0A7S3A8B0_9RHOD (40S ribosomal protein S8 n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8B0_9RHOD)

HSP 1 Score: 256 bits (653), Expect = 7.720e-84
Identity = 127/206 (61.65%), Postives = 158/206 (76.70%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGCIIQIDATPFRRYYHNYYGIDIGKKK--AGENEREKISEXXXXXXXXRAADRLPLDDGVKELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKKKSGK 204
            MGISRD  HKRRLTGGK PY+RKKRK+ +GRQP  TKLG+K+VRPVRVRGGN+K RALR+ETGNF+WGSE +A K+R++ V YNASNNELVRTNTLVKG I+ IDA PF+ +Y+ +YGI++GKKK   GE E  K S         R + R  L+  +++ F +GRLLA ++SRPGQCGR DGYILEG+EL+FY + +  KKK  K
Sbjct:    1 MGISRDKTHKRRLTGGKRPYYRKKRKFCMGRQPTLTKLGSKIVRPVRVRGGNIKQRALRLETGNFSWGSEAIARKTRLIAVTYNASNNELVRTNTLVKGAIVYIDANPFKAWYNQHYGIELGKKKHKEGEEEGTKRSASVLKKIEARESSR-SLERQIEDQFMTGRLLARIASRPGQCGRCDGYILEGRELDFYVKQLSHKKKKTK 205          
BLAST of Gchil5757.t1 vs. uniprot
Match: A0A1V9YFX5_9STRA (40S ribosomal protein S8 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YFX5_9STRA)

HSP 1 Score: 254 bits (650), Expect = 2.140e-83
Identity = 133/199 (66.83%), Postives = 154/199 (77.39%), Query Frame = 0
Query:    2 GISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGCIIQIDATPFRRYYHNYYGIDIGKKKAGENEREKISEXXXXXXXXRAADRLPLDDGVKELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKK 200
            GISRDS+HKRR TGGK  +FRKKRK+ELGRQPA TK+G K V  VRVRGGNLK RALR+ETGNF+WG+E VA K+RIL+V+YNASNNELVRT TLVK  IIQIDATPFR++Y  +YG+ +GK KA E E  K S         RA  ++ LD  V+E F SGRLLA +SSRPGQ GR DGYILEGKELEFY+R +  KK
Sbjct:    4 GISRDSKHKRRETGGKRKFFRKKRKFELGRQPANTKMGAKRVSTVRVRGGNLKFRALRLETGNFSWGTEVVARKTRILDVLYNASNNELVRTKTLVKNAIIQIDATPFRQWYEAHYGVKLGKNKAEETEEVKKSSHVERKQAARARTQV-LDPKVEEQFTSGRLLACISSRPGQSGRCDGYILEGKELEFYSRKLATKK 201          
BLAST of Gchil5757.t1 vs. uniprot
Match: M2XRH6_GALSU (40S ribosomal protein S8 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRH6_GALSU)

HSP 1 Score: 254 bits (649), Expect = 3.350e-83
Identity = 130/206 (63.11%), Postives = 156/206 (75.73%), Query Frame = 0
Query:    1 MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRGGNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGCIIQIDATPFRRYYHNYYGIDIGKKKAGENEREKISEXXXXXXXXRAADRL--PLDDGVKELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKKKSGK 204
            MGI+RD+ HKRRLTGGK   +RKKRKY LGRQPA TKLG K VRPVRVRGGN K RALR++TGNF+WGSE  + K+RI+ VVYNASNNELVRTNTLVKGCI+QIDATPFR++Y  +YGI+IGKK            XX      +    +  P++  + + F +G+LLA ++SRPGQCGR DGYILE KELEFY R MQ++KKSGK
Sbjct:    1 MGITRDTLHKRRLTGGKKAVWRKKRKYNLGRQPANTKLGPKAVRPVRVRGGNYKFRALRLDTGNFSWGSESTSRKTRIVAVVYNASNNELVRTNTLVKGCIVQIDATPFRQWYSQHYGIEIGKKXXXXXXXXXXXXXXTKAVDKQKVSAVSRPVEKALLDQFSTGKLLARVTSRPGQCGRCDGYILEAKELEFYQRQMQRRKKSGK 206          
The following BLAST results are available for this feature:
BLAST of Gchil5757.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRX7_9FLOR2.340e-12488.2440S ribosomal protein S8 n=1 Tax=Gracilariopsis ch... [more]
R7QGG9_CHOCR1.190e-11783.3340S ribosomal protein S8 n=1 Tax=Chondrus crispus ... [more]
RS8_GRIJA8.160e-10978.4340S ribosomal protein S8 n=1 Tax=Griffithsia japon... [more]
A0A1X6P2M7_PORUM7.650e-8970.3940S ribosomal protein S8 n=1 Tax=Porphyra umbilica... [more]
A0A7S1EQ05_9RHOD1.090e-8865.0540S ribosomal protein S8 n=1 Tax=Timspurckia oligo... [more]
A0A5J4YIL6_PORPP1.490e-8867.4840S ribosomal protein S8 n=1 Tax=Porphyridium purp... [more]
A0A1Y1I5M7_KLENI1.560e-8564.4540S ribosomal protein S8 n=1 Tax=Klebsormidium nit... [more]
A0A7S3A8B0_9RHOD7.720e-8461.6540S ribosomal protein S8 n=4 Tax=Rhodosorus marinu... [more]
A0A1V9YFX5_9STRA2.140e-8366.8340S ribosomal protein S8 n=4 Tax=Saprolegniaceae T... [more]
M2XRH6_GALSU3.350e-8363.1140S ribosomal protein S8 n=1 Tax=Galdieria sulphur... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..144
NoneNo IPR availableGENE3D3.10.290.70coord: 26..201
e-value: 4.1E-51
score: 174.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..149
NoneNo IPR availablePANTHERPTHR10394:SF340S RIBOSOMAL PROTEIN S8coord: 1..201
NoneNo IPR availableCDDcd11380Ribosomal_S8e_likecoord: 5..184
e-value: 4.7133E-58
score: 177.327
IPR042563Ribosomal protein S8e subdomain, eukaryotesGENE3D1.10.168.20Ribosomal protein S8e, subdomaincoord: 108..163
e-value: 2.5E-12
score: 49.2
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 5..184
e-value: 2.2E-54
score: 183.3
IPR001047Ribosomal protein S8eTIGRFAMTIGR00307TIGR00307coord: 1..186
e-value: 3.6E-49
score: 164.1
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 1..201
IPR018283Ribosomal protein S8e, conserved sitePROSITEPS01193RIBOSOMAL_S8Ecoord: 11..30

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1458535..1459260 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5757.t1Gchil5757.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1458535..1459260 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5757.t1 ID=Gchil5757.t1|Name=Gchil5757.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=205bp
MGISRDSRHKRRLTGGKHPYFRKKRKYELGRQPAQTKLGTKLVRPVRVRG
GNLKMRALRVETGNFAWGSEGVAHKSRILNVVYNASNNELVRTNTLVKGC
IIQIDATPFRRYYHNYYGIDIGKKKAGENEREKISEKKAEKQAKRAADRL
PLDDGVKELFQSGRLLASLSSRPGQCGRADGYILEGKELEFYTRVMQKKK
KSGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042563Ribosomal_protein_S8e_euk
IPR022309Ribosomal_S8e/biogenesis_NSA2
IPR001047Ribosomal_S8e
IPR018283Ribosomal_S8e_CS