Gchil5717.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5717.t1
Unique NameGchil5717.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length461
Homology
BLAST of Gchil5717.t1 vs. uniprot
Match: R7Q5R6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5R6_CHOCR)

HSP 1 Score: 299 bits (765), Expect = 5.140e-93
Identity = 178/368 (48.37%), Postives = 239/368 (64.95%), Query Frame = 0
Query:    1 MDMSLKEAEERVWTLQYRYVSVLEAAGMQDLPEQKPHIAIKHILKRVKPPRLRTRMKNIVEWRKDEGFENKDFGAFMRELAKQAKKLE-EELETEGSQESDTDNSETDSGATRRHGGKSGQKNKQRVGKKRSRQDEEKTASS------KDS---PESKKAKADLPPCLNPKCDGHHFISKYHNSSEEVEDTLRKEYRERKKAGRRNRADIPA-SKPTNGGVKKGSLHRFGAEIIDSHSSLFSAYFFQGAVETVVLGDQGADTNVIPMAVFQKIRKADPNCPIQALNPPHIYTGIAALASLKAAPQPKPNILLCKKQVELDVHLRIRHGTQLVLRSVTWKIADTDLDCVIIGRQVLQALGCDNKAILAA 357
            MDMSLKEAE+RVW+L  RY+ VLEAAG+ DLP +KPHIAIKHILKR+KP RLR+R+++I++WRK E F  KDFGAFMR LA+QAK LE E++  E    S +D+  +   ++ +H  +     K +  ++  R D ++  SS      KDS    ESKK ++  P C NP CDG+HFI     SSEE     + EYR RK+  R+ R D  + S     G +KGS+ R GA+ ID HSSLFSA F   AVE+V++ DQG+D N++P AVF  I +A  N  + +L PPH Y+ +            +   L C++ +  DVHLRIRHG +LVLR++TWK++D   +CVIIGR+VLQA+GCDNKA+L A
Sbjct:  126 MDMSLKEAEDRVWSLHLRYLEVLEAAGLADLPTRKPHIAIKHILKRIKPFRLRSRIRSILQWRKGEDFGKKDFGAFMRVLAEQAKTLEMEQVSREQQMASSSDSDRSSEESSGKHDKRHRVTKKGKKSRRGRRGDAKRGVSSGQDKHPKDSLSSTESKKRRSFAPKCFNPACDGYHFIDDCPISSEEQRRRYKDEYRARKQ--RKMRFDTGSGSADRQIGQRKGSVRRIGADAIDPHSSLFSATFIDSAVESVIMADQGSDGNIMPPAVFDMIAEAASNLHVASLVPPHTYSFV-----------DQDRGLTCRRSMTADVHLRIRHGVKLVLRNITWKVSDQPAECVIIGREVLQAIGCDNKAMLQA 480          
BLAST of Gchil5717.t1 vs. uniprot
Match: A0A2V3IRL8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRL8_9FLOR)

HSP 1 Score: 256 bits (654), Expect = 2.040e-75
Identity = 173/468 (36.97%), Postives = 271/468 (57.91%), Query Frame = 0
Query:    1 MDMSLKE--AEERVWTLQYRYVSVLEAAGMQDLPEQKPHIAIKHILKRVKPPRLRTRMKNIVEWRKDEGFENKDFGAFMRELAKQAKKLEEELETEGSQESDTDNSETDSGATRRHGGKSGQKNKQRVGKKRSRQDEEKTASSKDSPESKKAKADLPPCLNPKCDGHHFISKYHNSSEEVEDTLRKEYRERKKAGRRNRADIPASKPTNGGVKKGSLHRFGAEIIDSHSSLFSAYFFQGAVETVVLGDQGADTNVIPMAVFQKIRKADPNCPIQALNPPHIYTGIAALASLKAAPQPKPNILLCKKQVELDVHLRIRHGTQLVLRSVTWKIADTDLDCVIIGRQVLQALGCDNKAILAAACDQHNGIINIPEALERDSNLRHAQGSGTIASLLQS------GTFHSSATEGDDGLEDTNEYIDLGDDDQSVIDEGVSNLVDKAKENGMSENGIVKLANLVEKYKQVFD 460
            MD + K    E +V  L  +Y + LE  G  +  E++P +A++H++KRV   +LR RM   ++ RK+EGF+ K++ AFMREL K+AK+++     +G + + ++ S++D     + G K    NK R  KK +       A+ K +    K K D   CLNP CDGHH++++   +S+E +  L  EY E KKA +       A K   G   KG++  FG   I+ +SSLFSA F  GAVE +V  DQG+D NVIP ++   + +AD +  +  L+    Y+     ASL+AAP      L C ++V  +V LRIRHG ++++  + W ++D D    II R+VL A+G DN+ ++AAACD+H+G++NIP+ LE+          G+I S+LQS       T+HS+    +D LE+++ Y+ LG+D +  ++  +   V+KA+ NG+S +G  +L  L +KYKQVFD
Sbjct:  130 MDKNTKSNSLEMQVLRLGLKYSTTLENLGYSEFIEKQPQLAVEHVIKRVTHEQLRKRMLLTIKLRKEEGFK-KNYKAFMRELLKEAKQIDRHEAAKGLK-ARSNFSDSDDDLEHKEGPKPDCANKDRRRKKGASGS---GANGKSNAGKDKPKRDRTSCLNPVCDGHHYMNECPMTSDEDKKKLVAEYHEAKKARK------GAEKKRKGDKYKGNIGTFGGAEIEENSSLFSATFCTGAVEGIVPADQGSDINVIPPSLLTLMLEADASLQVIELDETLEYSN----ASLEAAP------LRCSRKVTSNVMLRIRHGRKMMMPGMEWLVSDGDTKYAIIRREVLSAIGLDNRTLMAAACDRHDGVLNIPKLLEKAQADAQTPIEGSIHSILQSRAFEHGSTYHSTGGAEEDMLEESDVYVGLGEDPKEDLEAALDGKVEKARANGLSTSGASRLTRLFKKYKQVFD 576          
BLAST of Gchil5717.t1 vs. uniprot
Match: A0A2V3IG26_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG26_9FLOR)

HSP 1 Score: 110 bits (275), Expect = 6.440e-23
Identity = 90/277 (32.49%), Postives = 142/277 (51.26%), Query Frame = 0
Query:    1 MDMSLKE--AEERVWTLQYRYVSVLEAAGMQDLPEQKPHIAIKHILKRVKPPRLRTRMKNIVEWRKDEGFENKDFGAFMRELAKQAKKLEEELETEGSQESDTDNSETDSGATRRHGGKSGQKNKQRVGKKRSRQDEEKTASSKDSPESKKAKADLPPCLNPKCDGHHFISKYHNSSEEVEDTLRKEYRERKKAGRRNRADIPASKPTNGGVKKGSLHRFGAEIIDSHSSLFSAYFFQGAVETVVLGDQGADTNVIPMAVFQKIRKADPNCPIQALN 275
            MD + K    + +V  L  +Y + LE  G  +  E++P +A+KH++KRV   +LR RM   ++ RK EGF+ K++  FMREL K+AK+++     +G + + ++ S++D     + G K  + NK R                               CLNP CDGHH++++  ++S+E +  L  EY E KKA +       A K   G   KG++       I+ +SSLFSA F  GAVE +VL DQG+D  VIP ++   I + D +  +  L+
Sbjct:  130 MDKNTKSNSLDMQVLRLGLKYSTTLENLGYSEFIEKQPQLAVKHVIKRVTHEQLRKRMLLTIKLRKKEGFK-KNYKVFMRELVKEAKQIDRHEAAKGFK-ARSNFSDSDDDLEHKEGPKPDRANKDRXXXXXXXXX---XXXXXXXXXXXXXXXXXXSCLNPVCDGHHYMNECPSTSDEDKKKLVAEYHEAKKARK------GAEKMRKGDKYKGNIGTVSGAEIEENSSLFSATFCTGAVEGIVLADQGSDIYVIPPSLLTLILEVDASLQVIELD 395          
BLAST of Gchil5717.t1 vs. uniprot
Match: A0A2V3ID65_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID65_9FLOR)

HSP 1 Score: 101 bits (252), Expect = 1.960e-20
Identity = 83/247 (33.60%), Postives = 129/247 (52.23%), Query Frame = 0
Query:    9 EERVWTLQYRYVSVLEAAGMQDLPEQKPHIAIKHILKRVKPPRLRTRMKNIVEWRKDEGFENKDFGAFMRELAKQAKKLEEELETEGSQESDTDNSETDSGATRRHGGKSGQKNKQRVGKKRSRQDEEKTASSKDSPESKKAKADLPPCLNPKCDGHHFISKYHNSSEEVEDTLRKEYRERKKAGRRNRADIPASKPTNGGVKKGSLHRFGAEIIDSHSSLFSAYFFQGAVETVVLGDQGADTNVIP 255
            E +V  L  +Y + LE  G  +  E++P +A++H+++RV   +LR RM   ++ RK+EGF+ K++ A MREL K+AK+++   ET    ++ ++ S++D     + G K  + NK                                 CLNP CDGHH++++   +S+E +  L  EY E K+A +       A K   G   KG++       I+ +SSLFSA F  GAVE +VL DQG+D NVIP
Sbjct:   60 EMQVLRLGLKYSTTLENLGYSEFIEKQPQLAVEHVIERVTLEQLRKRMLLTIKLRKEEGFK-KNYKAVMRELVKEAKQIDRH-ETAKGFKARSNFSDSDDDLEHKEGPKPDRANKXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXCLNPVCDGHHYMNECPITSDEDKKKLVAEYHEAKRARK------GAEKKRKGDKYKGNIGTVDGAEIEKNSSLFSATFCTGAVEGIVLADQGSDINVIP 295          
The following BLAST results are available for this feature:
BLAST of Gchil5717.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7Q5R6_CHOCR5.140e-9348.37Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IRL8_9FLOR2.040e-7536.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG26_9FLOR6.440e-2332.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID65_9FLOR1.960e-2033.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..211
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 128..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1087874..1089256 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5717.t1Gchil5717.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1087874..1089256 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5717.t1 ID=Gchil5717.t1|Name=Gchil5717.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=461bp
MDMSLKEAEERVWTLQYRYVSVLEAAGMQDLPEQKPHIAIKHILKRVKPP
RLRTRMKNIVEWRKDEGFENKDFGAFMRELAKQAKKLEEELETEGSQESD
TDNSETDSGATRRHGGKSGQKNKQRVGKKRSRQDEEKTASSKDSPESKKA
KADLPPCLNPKCDGHHFISKYHNSSEEVEDTLRKEYRERKKAGRRNRADI
PASKPTNGGVKKGSLHRFGAEIIDSHSSLFSAYFFQGAVETVVLGDQGAD
TNVIPMAVFQKIRKADPNCPIQALNPPHIYTGIAALASLKAAPQPKPNIL
LCKKQVELDVHLRIRHGTQLVLRSVTWKIADTDLDCVIIGRQVLQALGCD
NKAILAAACDQHNGIINIPEALERDSNLRHAQGSGTIASLLQSGTFHSSA
TEGDDGLEDTNEYIDLGDDDQSVIDEGVSNLVDKAKENGMSENGIVKLAN
LVEKYKQVFD*
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