Gchil5754.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5754.t1
Unique NameGchil5754.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length206
Homology
BLAST of Gchil5754.t1 vs. uniprot
Match: A0A2V3IUJ5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUJ5_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 4.800e-52
Identity = 92/193 (47.67%), Postives = 119/193 (61.66%), Query Frame = 0
Query:   12 PTHFTSAQQRSGNEGKILNPEDVPLRYGRKFQPFPSPHPSLNFGIMQWYWVPGFALDIFFLLNVAIFVFVVASTLTVVLAPS--LAGKLGGGFTLAVFVIVCSYLRINLGIIQSLRTAICRCYAKRDVAVNIWEKADSHDFIYCKDVFHSEKSFFYDLAVLRDGCVEIRNGNEERIQSEATSLGIGMQMELNA 202
            P+    A  + G+ G++LN   VPL +GR  +PFP+PHP +NF  M+W+W PGFA DI F+L+V  FV  V +T+ +        AGK  G     +   V  Y+R+N+GI Q LRTAICRCYAKR+ AV  WE AD  DFIY KDVFH EKSFFY + VLRDG VE+RN  +  I      + +GM   + A
Sbjct:    5 PSSTAQAANKHGDAGELLNSTLVPLHWGRSLKPFPAPHPPVNFNPMEWFWFPGFAFDIRFILSVVAFVLYVLATVVLFAGSGGITAGKSIGATVFFILASVVVYIRVNIGINQVLRTAICRCYAKRNDAVAAWEIADHRDFIYAKDVFHEEKSFFYHIVVLRDGSVEMRNIVDRGIAKGGADIEVGMHANIKA 197          
BLAST of Gchil5754.t1 vs. uniprot
Match: A0A2V3INU9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INU9_9FLOR)

HSP 1 Score: 157 bits (398), Expect = 3.160e-45
Identity = 82/171 (47.95%), Postives = 111/171 (64.91%), Query Frame = 0
Query:    9 PSVPTHFTSAQQRSGNEGKILNPEDVPLRYGRKFQPFPSPHPSLNFGIMQWYWVPGFALDI-FFLLNVAIFVFVVASTLTVVLAPSLAGKLGGGFTLAVFVIVCSYLRINLGIIQSLRTAICRCYAKRDVAVNIWEKADSHDFIYCKDVFHSEKSFFYDLAVLRDGCVEIR 178
            P+ P   T A  + G+ G+ILNP +VPL +G   +PFP+PH S+ F  M+W W PGFA D+ FFL  ++    +  S +   +  +  GK  G   L +   +  +LR+N+ I Q++RTAICRCYAKR VA+ +WE A+  D IY KDVFH+EKSFFYD+ VLRDG VEIR
Sbjct:   10 PAQPATTTQAPHKHGDVGEILNPTEVPLVWGCTLKPFPAPHASVYFHPMKWSWFPGFAFDVRFFLFALSAVSTMSFSIILNTVDNASPGKWVGASVLPILAGIAGFLRLNIAINQTIRTAICRCYAKRAVAIAVWENAEQKDLIYAKDVFHAEKSFFYDIVVLRDGSVEIR 180          
The following BLAST results are available for this feature:
BLAST of Gchil5754.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IUJ5_9FLOR4.800e-5247.67Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3INU9_9FLOR3.160e-4547.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 61..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:1446781..1447398 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5754.t1Gchil5754.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 1446781..1447398 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5754.t1 ID=Gchil5754.t1|Name=Gchil5754.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=206bp
MSAYPHGIPSVPTHFTSAQQRSGNEGKILNPEDVPLRYGRKFQPFPSPHP
SLNFGIMQWYWVPGFALDIFFLLNVAIFVFVVASTLTVVLAPSLAGKLGG
GFTLAVFVIVCSYLRINLGIIQSLRTAICRCYAKRDVAVNIWEKADSHDF
IYCKDVFHSEKSFFYDLAVLRDGCVEIRNGNEERIQSEATSLGIGMQMEL
NAGIA*
back to top