Gchil1601.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1601.t1
Unique NameGchil1601.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length159
Homology
BLAST of Gchil1601.t1 vs. uniprot
Match: A0A2V3IFI7_9FLOR (Trigger_N domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFI7_9FLOR)

HSP 1 Score: 201 bits (511), Expect = 2.980e-63
Identity = 98/154 (63.64%), Postives = 128/154 (83.12%), Query Frame = 0
Query:    1 MTLLSHEKLDVVLSTEEGEVAKYKLELEIPASIPKEKRKESIQAVKKNAAFKGFRKGTIPPFIMIEIEQFVLQDSCSAVIEDAAKELELRPVEGKDAMAKLDFKDLRKRFRIGEDFVFTCEVQLQSITTEKPTEELEEIVSYK-GEVPTIDITK 153
            MTLLSHEKLDVVLST++GE+AKYKLELE+P ++ K KR+ESIQ+VKKNA+FKGFRKGTIPPFIM EI+ FVL D C+ VIE+A KEL+L  ++G++A  K+D ++++KRF IGEDF FTCEVQLQ+   E P EELE++V+    ++ T+D+TK
Sbjct:   31 MTLLSHEKLDVVLSTKDGEIAKYKLELEVPGALSKSKRRESIQSVKKNASFKGFRKGTIPPFIMKEIDSFVLNDVCNTVIEEATKELQLSAIDGEEAQPKMDLEEMKKRFNIGEDFYFTCEVQLQAANFETPFEELEDVVTIDVDDISTVDVTK 184          
BLAST of Gchil1601.t1 vs. uniprot
Match: R7QTQ2_CHOCR (Trigger_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTQ2_CHOCR)

HSP 1 Score: 117 bits (292), Expect = 5.720e-30
Identity = 62/150 (41.33%), Postives = 93/150 (62.00%), Query Frame = 0
Query:    1 MTLLSHEKLDVVLSTEEGEVAKYKLELEIPASIPKEKRKESIQAVKKNAAFKGFRKGTIPPFIMIEIEQFVLQDSCSAVIEDAAKELELRPVEGKDAMAKLDFKDLRKRFRIGEDFVFTCEVQLQSITTEKPTEELEEIVSYKGEVPTID 150
            M+++SHEKL V+  +E  E+A+YK+ELEIPAS  K+KR++S+QA++KNA FKGFRKGTIPPFIM +I                   L+L   +G  A   +DF+++  RF +GEDF F+ E+ L+ + +       ++I+  K +V   D
Sbjct:   32 MSIVSHEKLQVLFESETSELAQYKIELEIPASHSKDKRRQSVQALRKNADFKGFRKGTIPPFIMKDIXXXXXXXXXXXXXXXXXXXLKLEKTDGDAADPDIDFEEMMGRFNVGEDFRFSLEMPLRKVLSLDTESLTQDILDVKSDVDLSD 181          
BLAST of Gchil1601.t1 vs. uniprot
Match: A0A5J4YSI7_PORPP (Trigger factor n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSI7_PORPP)

HSP 1 Score: 92.4 bits (228), Expect = 2.190e-20
Identity = 51/140 (36.43%), Postives = 85/140 (60.71%), Query Frame = 0
Query:    8 KLDVVLSTEEGEVAKYKLELEIPASIPKEKRKESIQAVKKNAAFKGFRKGTIPPFIMIEIEQFVLQDSCSAVIEDAAKELELRPVEGKDAMAKLD--FKDLRKRFRIGEDFVFTCEVQLQSITTEKPTEELEEIVSYKGE 145
            +L+ V +     +AKY +++ +P     E  K ++++ K++A FKGFRKGTIPPF+M EIE F +Q+  +A ++ A +E +L  +EG+ AM +L   F +LRK F++GE F F   + LQ  T +    E +++   + E
Sbjct:   65 ELEEVFNAGGKRIAKYSIKVTVPGETNLEIYKSTLRSAKQSADFKGFRKGTIPPFMMKEIEVFAMQECLNAALDRAVEENQLMYLEGEAAMPELKPPFDELRKTFKVGEPFSFEAHISLQ--TRDAEDSETDDVTDIQAE 202          
BLAST of Gchil1601.t1 vs. uniprot
Match: A0A7S0ZKE3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZKE3_9RHOD)

HSP 1 Score: 91.7 bits (226), Expect = 7.540e-20
Identity = 49/125 (39.20%), Postives = 75/125 (60.00%), Query Frame = 0
Query:   12 VLSTEEGEVAKYKLELEIPASIPKEKRKESIQAVKKNAAFKGFRKGTIPPFIMIEIEQFVLQDSCSAVIEDAAKELELRPVEGKDAMAKLD--FKDLRKRFRIGEDFVFTCEVQLQSITTEKPTE 134
            V  + +  ++KY+    IP ++ KE  + +I+  KKNA FKGFRKGTIPPF+  EI  F LQD  + ++++A K  EL  +EG  A  + D  FK ++  F IG+ F FT ++ L+   ++K  E
Sbjct:   96 VFESGDESISKYRFTGNIPGAMSKESFQTTIREFKKNADFKGFRKGTIPPFMKAEIHAFTLQDCINTLMQNAMKSQELELLEGDAADPEFDIPFKQMKSNFEIGKPFEFTAQIALKKAQSDKDKE 220          
BLAST of Gchil1601.t1 vs. uniprot
Match: L1JH75_GUITC (Trigger_N domain-containing protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JH75_GUITC)

HSP 1 Score: 67.4 bits (163), Expect = 6.710e-11
Identity = 40/121 (33.06%), Postives = 62/121 (51.24%), Query Frame = 0
Query:   13 LSTEEGEVAKYKLELEIPASIPKEKRKESIQAVKKNAAFKGFRKGTIPPFIMIEIEQFVLQDSCSAVIEDAAKE--LELRPVEGKDAMAKLDFKDLRKRFRIGEDFVFTCEVQLQSITTEK 131
            L   EG  AKYK  + +   + K+     ++  KKNA F GFRKG+IPPF++ +++QFV+ +     + +A +E  LEL     K  +      +L K F     F +T E  L+  T E+
Sbjct:   70 LEEGEGNAAKYKFTVTVDGQMSKDSYTAIMKDFKKNAQFPGFRKGSIPPFMIPKVKQFVILECLEKSLGEAVREQALELADENNKPNLDDAQVAELTKTFNENNGFKYTIEALLKPSTAEE 190          
The following BLAST results are available for this feature:
BLAST of Gchil1601.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IFI7_9FLOR2.980e-6363.64Trigger_N domain-containing protein n=1 Tax=Gracil... [more]
R7QTQ2_CHOCR5.720e-3041.33Trigger_N domain-containing protein n=1 Tax=Chondr... [more]
A0A5J4YSI7_PORPP2.190e-2036.43Trigger factor n=1 Tax=Porphyridium purpureum TaxI... [more]
A0A7S0ZKE3_9RHOD7.540e-2039.20Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
L1JH75_GUITC6.710e-1133.06Trigger_N domain-containing protein n=2 Tax=Guilla... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036611Trigger factor ribosome-binding domain superfamilyGENE3D3.30.70.1050coord: 10..128
e-value: 7.0E-12
score: 47.4
IPR036611Trigger factor ribosome-binding domain superfamilySUPERFAMILY102735Trigger factor ribosome-binding domaincoord: 18..124
IPR008881Trigger factor, ribosome-binding, bacterialPFAMPF05697Trigger_Ncoord: 15..126
e-value: 3.2E-10
score: 40.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1132408..1132884 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1601.t1Gchil1601.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1132408..1132884 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1601.t1 ID=Gchil1601.t1|Name=Gchil1601.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=159bp
MTLLSHEKLDVVLSTEEGEVAKYKLELEIPASIPKEKRKESIQAVKKNAA
FKGFRKGTIPPFIMIEIEQFVLQDSCSAVIEDAAKELELRPVEGKDAMAK
LDFKDLRKRFRIGEDFVFTCEVQLQSITTEKPTEELEEIVSYKGEVPTID
ITKTPENR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036611Trigger_fac_ribosome-bd_sf
IPR008881Trigger_fac_ribosome-bd_bac