Gchil5691.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5691.t1
Unique NameGchil5691.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length109
Homology
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BLAST of Gchil5691.t1 vs. uniprot
Match: R7Q5Y4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5Y4_CHOCR)

HSP 1 Score: 113 bits (283), Expect = 1.780e-29
Identity = 77/108 (71.30%), Postives = 84/108 (77.78%), Query Frame = 0 
Query:    1 MIRIRNGRVLHTTSPGPWPFCLIPGFGFLLHVWHAITVFLKSIFIPSAANKARRGPAPRSSRFYGXXXXXXXXXXXXXXXXXXXXPN-RAIGGMDSLPSSAASTCLTC 107
            M  +RNGRV+   S GPWP CLIPGFG LL VW A+ VF+ SIF PSAA +ARR PAPRSSRFYG  XXXXXXXXXXXXXXXXXX    A GGMD+LPSSA STC +C
Sbjct:   86 MAYVRNGRVVQNASRGPWPLCLIPGFGLLLDVWAALVVFITSIFKPSAAKQARRKPAPRSSRFYGAGXXXXXXXXXXXXXXXXXXXGPSAFGGMDTLPSSANSTCASC 193
The following BLAST results are available for this feature:
BLAST of Gchil5691.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7Q5Y4_CHOCR1.780e-2971.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024491Selenoprotein SelK/SelGPFAMPF10961SelK_SelGcoord: 5..85
e-value: 1.1E-6
score: 29.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 45..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000015_piloncontigtig00000015_pilon:768085..768499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5691.t1Gchil5691.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000015_pilon 768085..768499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5691.t1 ID=Gchil5691.t1|Name=Gchil5691.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=109bp
MIRIRNGRVLHTTSPGPWPFCLIPGFGFLLHVWHAITVFLKSIFIPSAAN
KARRGPAPRSSRFYGGGGGGGGGGGGGGGGGGGGGPNRAIGGMDSLPSSA
ASTCLTCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024491Se_SelK/SelG