Gchil1641.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil1641.t1
Unique NameGchil1641.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length218
Homology
BLAST of Gchil1641.t1 vs. uniprot
Match: A0A2V3IFL6_9FLOR (Geranylgeranyl pyrophosphate synthase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFL6_9FLOR)

HSP 1 Score: 388 bits (996), Expect = 1.420e-133
Identity = 196/217 (90.32%), Postives = 206/217 (94.93%), Query Frame = 0
Query:    1 MSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQSDISIDTLTWIHTHKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGERAHTLFALADFIISRNN 217
            MSLIHDDLPSMDNDD RRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNT SVDPARVVEVLALLTNSVGP GLAGGQVMDI+SEGQ DISIDTLTWIHTHKTAALLRVSCACGAILGGAS EDVRRVS+FAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLAT+KATYPRLLGLD S++ A+ LI + KESLAPYGER+H L+ALADFII+RNN
Sbjct:  138 MSLIHDDLPSMDNDDVRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTHSVDPARVVEVLALLTNSVGPDGLAGGQVMDIQSEGQPDISIDTLTWIHTHKTAALLRVSCACGAILGGASPEDVRRVSDFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATDKATYPRLLGLDASRQHAKRLITEAKESLAPYGERSHMLYALADFIIARNN 354          
BLAST of Gchil1641.t1 vs. uniprot
Match: R7QMY9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMY9_CHOCR)

HSP 1 Score: 349 bits (895), Expect = 1.520e-119
Identity = 169/217 (77.88%), Postives = 198/217 (91.24%), Query Frame = 0
Query:    1 MSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQSDISIDTLTWIHTHKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGERAHTLFALADFIISRNN 217
            MSLIHDDLP+MD+DDFRRGKPTNH VYGEDIAILAGDA+LSYAFEYVAR TR VDP RV+EV+ LL+N VGP GLAGGQVMD++SEG++D+S++TLTWIHTHKTAALLRVSCA GA++GGAS +DV+RVS+FAVK GLAFQIADDVLD+TQSTE+LGKTAGKD AT KATYPRLLGL+GS++QA+ L+ + KE LAPYGER+  L ALADFII+R+N
Sbjct:   49 MSLIHDDLPAMDDDDFRRGKPTNHMVYGEDIAILAGDAMLSYAFEYVARETRDVDPVRVLEVIRLLSNCVGPEGLAGGQVMDLESEGKTDVSLETLTWIHTHKTAALLRVSCAGGAVIGGASEDDVQRVSDFAVKIGLAFQIADDVLDVTQSTEMLGKTAGKDEATNKATYPRLLGLEGSRQQAERLVAEAKECLAPYGERSKNLLALADFIINRSN 265          
BLAST of Gchil1641.t1 vs. uniprot
Match: A0A7S1THP1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1THP1_9RHOD)

HSP 1 Score: 320 bits (819), Expect = 2.310e-107
Identity = 162/217 (74.65%), Postives = 183/217 (84.33%), Query Frame = 0
Query:    1 MSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQSDISIDTLTWIHTHKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGERAHTLFALADFIISRNN 217
            MSLIHDDLPSMDNDDFRRGKPTNHKVYGE +AILAGDALLS +FEYVAR T+ VDPARV+ V++LL +SVG  GL GGQVMDI++EG  D+ IDTLTWIHT KTAALLRVS A GAILGGAS EDV RVSEFAVK GLAFQI DDVLD+TQSTE LGKTAGKD+   KATYPRLLGL+GS+ +A+ LI + K  L PYG++A  L  LA+FIISR+N
Sbjct:   91 MSLIHDDLPSMDNDDFRRGKPTNHKVYGESMAILAGDALLSRSFEYVARETKGVDPARVLRVISLLGDSVGVEGLVGGQVMDIENEGNPDVPIDTLTWIHTKKTAALLRVSVAAGAILGGASDEDVERVSEFAVKIGLAFQIRDDVLDVTQSTEHLGKTAGKDITANKATYPRLLGLEGSRIEAERLIAEAKACLKPYGQQAIPLLGLAEFIISRSN 307          
BLAST of Gchil1641.t1 vs. uniprot
Match: A0A7S0ZLI6_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZLI6_9RHOD)

HSP 1 Score: 307 bits (787), Expect = 2.160e-101
Identity = 153/217 (70.51%), Postives = 182/217 (83.87%), Query Frame = 0
Query:    1 MSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQSDISIDTLTWIHTHKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGERAHTLFALADFIISRNN 217
            MSLIHDDLP+MDNDDFRRG PTNH  YGEDIAILAGDA+L+ +FEYVARNT+ V P RV+ V+ALL  SVG  GL GGQVMD+++EG  D++++ L+WIH  KTAALLRVS A GAI+GGA+++DV RVSEFA K GLAFQIADDVLD+TQ+TE LGKTAGKD A  KATYPRLLGL+ S+++A+ LIQ+ KE LAPYG R+ TL ALADFII+R N
Sbjct:  170 MSLIHDDLPAMDNDDFRRGMPTNHVKYGEDIAILAGDAMLAKSFEYVARNTKDVSPERVLRVIALLAESVGAEGLVGGQVMDLQNEGNPDVTLNQLSWIHHMKTAALLRVSVAAGAIIGGANNDDVERVSEFANKIGLAFQIADDVLDVTQTTEELGKTAGKDEAVNKATYPRLLGLEKSRQEAERLIQEAKECLAPYGGRSETLLALADFIIARKN 386          
BLAST of Gchil1641.t1 vs. uniprot
Match: X5CQI2_9EUKA (Geranylgeranyl pyrophosphate synthetase n=2 Tax=Eukaryota TaxID=2759 RepID=X5CQI2_9EUKA)

HSP 1 Score: 299 bits (765), Expect = 8.590e-99
Identity = 146/217 (67.28%), Postives = 176/217 (81.11%), Query Frame = 0
Query:    1 MSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQSDISIDTLTWIHTHKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGERAHTLFALADFIISRNN 217
            MSLIHDDLP+MDNDDFRRGKPTNH +YGED+AILAGDA+LS AFEYVA NT+ V   RVV+VL +L   VGP GLAGGQVMD+K EG+SD+SI+TL WIHT+KTAALL+ +  CGA+L GAS ED++R   +A K GLAFQ+ADD+LD+T STE LGKTAGKDL  +K TYP+LLGLD S++ AQ L+   K +L PYGERA  L  LAD+II+R+N
Sbjct:  117 MSLIHDDLPAMDNDDFRRGKPTNHVLYGEDVAILAGDAMLSTAFEYVAANTKGVPAERVVKVLRMLGECVGPLGLAGGQVMDLKCEGKSDVSIETLQWIHTYKTAALLKAAVCCGAVLAGASEEDLKRCETYANKIGLAFQVADDILDVTASTEELGKTAGKDLDADKTTYPKLLGLDRSREVAQELVNDAKAALEPYGERAAPLLGLADYIITRSN 333          
BLAST of Gchil1641.t1 vs. uniprot
Match: A0A0D3KMJ3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A0D3KMJ3_EMIHU)

HSP 1 Score: 293 bits (750), Expect = 3.150e-98
Identity = 143/215 (66.51%), Postives = 172/215 (80.00%), Query Frame = 0
Query:    3 LIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQSDISIDTLTWIHTHKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGERAHTLFALADFIISRNN 217
            +IHDDLP+MDNDDFRRGKPTNH +YG+D+AILAGDA+LS AFEYVA NT+ V   RVV+VL +L  SVGP GLAGGQVMD+K EGQ D+ IDTL WIHT+KTAALL+ +  CGA L GAS ED+ R   +A K GLAFQ+ADD+LD+T STE LGKTAGKDL  +K TYP+LLGLD S++ A+ L+ + K +L PYGERA  L  LAD+IISR+N
Sbjct:    1 MIHDDLPAMDNDDFRRGKPTNHVLYGDDVAILAGDAMLSTAFEYVAANTKGVAAERVVQVLRMLGESVGPMGLAGGQVMDLKCEGQPDVGIDTLQWIHTYKTAALLKAAVCCGAALAGASDEDLARCETYANKIGLAFQVADDILDVTASTEELGKTAGKDLDADKTTYPKLLGLDRSREVARELVDEAKAALEPYGERAAPLLGLADYIISRSN 215          
BLAST of Gchil1641.t1 vs. uniprot
Match: R1CWE3_EMIHU (Geranylgeranyl pyrophosphate synthase n=4 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CWE3_EMIHU)

HSP 1 Score: 297 bits (761), Expect = 3.830e-98
Identity = 146/217 (67.28%), Postives = 174/217 (80.18%), Query Frame = 0
Query:    1 MSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQSDISIDTLTWIHTHKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGERAHTLFALADFIISRNN 217
            MSLIHDDLP+MDNDDFRRGKPTNH +YG+D+AILAGDA+LS AFEYVA NT+ V   RVV+VL +L  SVGP GLAGGQVMD+K EGQ D+ IDTL WIHT+KTAALL+ +  CGA L GAS ED+ R   +A K GLAFQ+ADD+LD+T STE LGKTAGKDL  +K TYP+LLGLD S++ A+ L+ + K +L PYGERA  L  LAD+IISR+N
Sbjct:  120 MSLIHDDLPAMDNDDFRRGKPTNHVLYGDDVAILAGDAMLSTAFEYVAANTKGVAAERVVQVLRMLGESVGPMGLAGGQVMDLKCEGQPDVGIDTLQWIHTYKTAALLKAAVCCGAALAGASDEDLARCETYANKIGLAFQVADDILDVTASTEELGKTAGKDLDADKTTYPKLLGLDRSREVARELVDEAKAALEPYGERAAPLLGLADYIISRSN 336          
BLAST of Gchil1641.t1 vs. uniprot
Match: A0A3G5BBY1_HASOS (Trans-prenyltransferase 5 n=1 Tax=Haslea ostrearia TaxID=67476 RepID=A0A3G5BBY1_HASOS)

HSP 1 Score: 294 bits (752), Expect = 9.160e-97
Identity = 144/219 (65.75%), Postives = 181/219 (82.65%), Query Frame = 0
Query:    1 MSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQ--SDISIDTLTWIHTHKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGERAHTLFALADFIISRNN 217
            MSLIHDDLPSMDNDD RRGKPTNH VYGE++AILAGDALLS +F++VA NT+ VDP RV++V+  L  SVGP GLAGGQ MD++ EG+   ++S+D L WIHTHKTAALL+VS A GAI+GGA+ E+V    ++A+  GLAFQ+ADD+LDITQS+E LGKTAGKDL  +KATYPRLLGLDG++++AQ LI + K++L P+G+RA  L ALAD+II+R N
Sbjct:  119 MSLIHDDLPSMDNDDLRRGKPTNHVVYGEEVAILAGDALLSDSFKFVAENTKGVDPERVLDVVVRLGKSVGPKGLAGGQAMDLECEGKPVDEVSLDDLRWIHTHKTAALLQVSVAAGAIIGGATPEEVEACEKYALNIGLAFQVADDILDITQSSEELGKTAGKDLEADKATYPRLLGLDGAREEAQRLIAESKKALEPFGDRAIPLLALADYIINRKN 337          
BLAST of Gchil1641.t1 vs. uniprot
Match: A0A7S4FAI0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FAI0_CHRCT)

HSP 1 Score: 292 bits (747), Expect = 1.200e-95
Identity = 141/217 (64.98%), Postives = 174/217 (80.18%), Query Frame = 0
Query:    1 MSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQSDISIDTLTWIHTHKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGERAHTLFALADFIISRNN 217
            MSLIHDDLP+MDNDDFRRGKPTNHK+YG+D+AILAGDA+LS AFE+VAR T+ V   R+V V+ +L  +VGP GLAGGQVMD+++EG+SD+  DTL WIHTHKTAALL+ + +CGAIL GAS ED+     +A+K GLAFQ+ADD+LD+T STE LGKTAGKD AT K TYP+LLGLD S++ AQ L+ + K +L  YG+ A  L  LAD+IISR N
Sbjct:  147 MSLIHDDLPAMDNDDFRRGKPTNHKLYGDDVAILAGDAMLSTAFEHVARETKGVPAERIVRVIRVLGETVGPLGLAGGQVMDLQNEGKSDVDYDTLVWIHTHKTAALLKAAVSCGAILAGASDEDIANCERYALKIGLAFQVADDILDVTGSTEELGKTAGKDEATSKTTYPKLLGLDRSREVAQELVDEAKAALEQYGDAAAPLNGLADYIISRTN 363          
BLAST of Gchil1641.t1 vs. uniprot
Match: A0A0G4GZU3_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GZU3_VITBC)

HSP 1 Score: 292 bits (748), Expect = 8.130e-95
Identity = 145/217 (66.82%), Postives = 172/217 (79.26%), Query Frame = 0
Query:    1 MSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARNTRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQSDISIDTLTWIHTHKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDITQSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGERAHTLFALADFIISRNN 217
            MSLIHDDLP+MDND  RRG PTNH  YGEDIAILAGDALLS +FEYVA+ T  V P R+V+VLA L  SVG  GLAGGQV+D++ EGQ D+++D L WIH HKTAALL+V+ ACGAILGGASS+DV+RV ++A   GLAFQ+ DD+LD+TQSTE LGKTAGKD    K TYP+LLGLDGSK +A+ LI +G + L PYGERA  L ALA +I+ R N
Sbjct:  221 MSLIHDDLPAMDNDTLRRGLPTNHVKYGEDIAILAGDALLSRSFEYVAKYTHDVPPERIVQVLARLGESVGVEGLAGGQVLDLELEGQPDVTVDDLRWIHRHKTAALLKVAVACGAILGGASSDDVQRVEQYAENVGLAFQVHDDILDVTQSTEELGKTAGKDADVSKTTYPKLLGLDGSKAEAKRLINEGIQLLVPYGERAIPLIALAKYIVERKN 437          
The following BLAST results are available for this feature:
BLAST of Gchil1641.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IFL6_9FLOR1.420e-13390.32Geranylgeranyl pyrophosphate synthase, chloroplast... [more]
R7QMY9_CHOCR1.520e-11977.88Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1THP1_9RHOD2.310e-10774.65Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZLI6_9RHOD2.160e-10170.51Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
X5CQI2_9EUKA8.590e-9967.28Geranylgeranyl pyrophosphate synthetase n=2 Tax=Eu... [more]
A0A0D3KMJ3_EMIHU3.150e-9866.51Uncharacterized protein n=1 Tax=Emiliania huxleyi ... [more]
R1CWE3_EMIHU3.830e-9867.28Geranylgeranyl pyrophosphate synthase n=4 Tax=Emil... [more]
A0A3G5BBY1_HASOS9.160e-9765.75Trans-prenyltransferase 5 n=1 Tax=Haslea ostrearia... [more]
A0A7S4FAI0_CHRCT1.200e-9564.98Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0G4GZU3_VITBC8.130e-9566.82Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 2..189
e-value: 4.8E-47
score: 160.2
IPR000092Polyprenyl synthetaseCDDcd00685Trans_IPPS_HTcoord: 1..215
e-value: 5.90491E-70
score: 212.411
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10Farnesyl Diphosphate Synthasecoord: 1..217
e-value: 7.1E-73
score: 247.1
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 1..208
NoneNo IPR availableSFLDSFLDS00005Isoprenoid_Synthase_Type_Icoord: 1..216
e-value: 0.0
score: 169.7
NoneNo IPR availablePANTHERPTHR43281:SF28GERANYLGERANYL PYROPHOSPHATE SYNTHASE, CHLOROPLASTICcoord: 1..217
NoneNo IPR availablePANTHERPTHR43281FARNESYL DIPHOSPHATE SYNTHASEcoord: 1..217
IPR033749Polyprenyl synthetase, conserved sitePROSITEPS00723POLYPRENYL_SYNTHASE_1coord: 3..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004403_piloncontigtig00004403_pilon:1386469..1387122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil1641.t1Gchil1641.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004403_pilon 1386469..1387122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil1641.t1 ID=Gchil1641.t1|Name=Gchil1641.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=218bp
MSLIHDDLPSMDNDDFRRGKPTNHKVYGEDIAILAGDALLSYAFEYVARN
TRSVDPARVVEVLALLTNSVGPHGLAGGQVMDIKSEGQSDISIDTLTWIH
THKTAALLRVSCACGAILGGASSEDVRRVSEFAVKTGLAFQIADDVLDIT
QSTEVLGKTAGKDLATEKATYPRLLGLDGSKKQAQTLIQQGKESLAPYGE
RAHTLFALADFIISRNN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000092Polyprenyl_synt
IPR008949Isoprenoid_synthase_dom_sf
IPR033749Polyprenyl_synt_CS