|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil7571.t1 ID=Gchil7571.t1|Name=Gchil7571.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=915bp MTSFSEARTGWRESEVERLLVELSPNATNDQIIHVLSKVSAEVPRISSAP DVYSQVSQALLDKVCPCLLHSSPPFGNNVWMMFEDFFLKGNHAIAFRELC GALDVNSDVGEIVARILILFVTERTGGVSRLTEVLSRASGSKLVSYLLHL PSRVTNVLMSNSMTEYKKEDLIDEKEYFGTIAEAIFNQPSTSDITRDSVL KELVARMVTMKHAETLVHRSFLIGDMEKLLQLISFAPHRSISSLTWALLN QRIETGREEKEIHDCICKLLSRNPVARNSCIHVLPFQQPVFKRPKKSIRR LVRAVVYGCEIETAEDALITASEIWSGEMFASAENIAMQRQVTRTVLCYL KYFARLHSNTSSISNSVMMILVDGVHVRLGANDVRTRRHGMVIGEASSRF CKDKKVLNFEREGSASIRRMEKKTIGDESLEDGGDTDFSELAEQVGQDIS DLEDEQREFGEENEPTQKEIDVVKKSLSSGGKMEDDTMKLGARSLVTASL PTNRKPSCTKCLIWPQSNQHEEWQQEDDWSSIESYSRSSSSEDEDNALYG KRALKKDYIELRKKLSAPMSVPRLLGLLIEVNKSDGGSTIVDASVAAAAL RTLASRAESNFITHGTLRSAAVELCLELVRIDPERYPDVDVPDLSAARGE ALHKVVQMDIGSCGSALVERVICGKMSDMQHRLEALGVLAKAVRSAHERV FGQTVRNSGQKDSSEGKEVAYFGETTKVLKHSLSKWRARQEELTQASHSL TWDIDGVAKVFHILASRLCEGGGASFVQIEGRDIELWAQGILTLATLGCY GGSGAQGSEMRFVVIEIAMRRVMKLKADGAVRRALALALSIVIGGMGDRE VREILLGGASDVIILPDYDEVVDIGREAFEWLQRAAEGDADIGVRRFAAL TLRKWSQRVEAFVK* back to topspliced messenger RNA >Gchil7571.t1 ID=Gchil7571.t1|Name=Gchil7571.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2745bp|location=Sequence derived from alignment at tig00000007_pilon:2053168..2055912- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGACAAGCTTTTCGGAAGCCAGAACAGGTTGGCGTGAAAGTGAAGTCGA ACGGCTGTTAGTAGAATTGAGCCCAAATGCCACTAATGACCAAATTATCC ATGTCCTATCGAAAGTCAGTGCAGAAGTCCCGAGAATATCATCTGCTCCT GATGTGTATTCTCAAGTGAGCCAAGCTTTATTAGACAAGGTTTGCCCTTG CTTGCTTCATAGTTCACCACCATTTGGAAATAATGTGTGGATGATGTTCG AAGACTTCTTCCTTAAGGGAAATCATGCCATTGCGTTTCGTGAATTGTGC GGGGCACTTGATGTTAATTCTGATGTTGGCGAAATCGTTGCACGTATTCT GATCTTGTTTGTGACTGAGAGAACTGGAGGGGTTTCTCGGTTGACAGAGG TTCTTTCAAGGGCATCAGGCTCGAAACTAGTGAGTTATCTTCTTCATCTT CCTTCGCGAGTCACTAATGTTCTGATGAGCAACTCAATGACAGAATACAA AAAGGAGGATTTGATTGATGAGAAAGAGTATTTTGGAACAATAGCAGAAG CCATATTCAACCAGCCTTCAACGTCAGATATTACGCGAGACAGCGTGCTC AAGGAGTTGGTTGCGCGGATGGTAACAATGAAACACGCGGAAACTTTAGT GCATCGCTCTTTTCTTATCGGGGACATGGAAAAGCTTTTGCAGCTGATAT CGTTCGCGCCCCATCGATCCATTTCATCTCTCACGTGGGCATTGTTAAAT CAAAGAATCGAGACCGGTCGAGAAGAGAAAGAAATTCACGACTGCATCTG CAAGTTGCTTTCCCGAAATCCAGTTGCTCGGAACAGTTGCATCCATGTCC TTCCATTTCAACAACCGGTTTTCAAGAGGCCGAAGAAATCCATCAGACGT CTAGTTCGAGCTGTTGTATATGGGTGTGAGATAGAAACAGCAGAAGATGC GTTAATAACAGCGTCAGAAATATGGAGTGGCGAAATGTTTGCATCAGCTG AGAATATTGCCATGCAACGGCAAGTGACTCGAACTGTCTTGTGCTACTTG AAGTACTTTGCAAGACTACATTCGAACACTAGTTCTATCTCGAATTCTGT AATGATGATTCTGGTGGATGGTGTACATGTAAGATTAGGCGCAAATGATG TTAGGACTCGACGCCATGGAATGGTCATTGGAGAAGCATCATCAAGGTTT TGCAAAGACAAAAAAGTTTTAAACTTCGAAAGAGAGGGTTCTGCCAGTAT TCGGAGAATGGAGAAGAAAACGATTGGAGACGAGAGCTTGGAAGACGGTG GCGATACAGACTTTTCTGAACTAGCAGAACAAGTCGGACAGGATATTTCG GACTTGGAAGATGAACAACGAGAATTTGGTGAAGAAAACGAACCAACCCA AAAGGAAATCGATGTTGTGAAGAAATCTCTATCATCAGGAGGAAAAATGG AGGACGACACGATGAAACTTGGTGCCAGGTCGCTAGTGACAGCCAGTCTT CCAACAAACAGAAAACCCAGCTGTACGAAATGTCTTATCTGGCCGCAATC AAATCAGCATGAAGAGTGGCAGCAAGAAGACGATTGGAGCAGCATAGAAT CGTATTCGAGGTCGAGTTCATCAGAGGATGAAGACAACGCGTTGTATGGC AAAAGGGCTCTAAAAAAAGACTACATTGAACTTAGGAAGAAGTTATCGGC GCCCATGTCCGTACCTAGGCTGTTAGGACTGCTGATTGAAGTGAATAAGT CCGACGGGGGAAGCACCATCGTCGACGCGAGTGTCGCAGCAGCAGCGTTG CGAACGCTGGCCTCTCGAGCTGAATCAAACTTCATAACGCACGGTACCTT GCGATCTGCGGCTGTAGAACTGTGCCTGGAACTTGTGCGGATCGATCCAG AACGTTATCCCGATGTTGATGTACCAGACCTGTCCGCAGCGCGAGGCGAA GCACTTCACAAGGTTGTGCAAATGGACATCGGTTCATGTGGTTCTGCTCT TGTGGAACGTGTCATCTGCGGGAAAATGAGTGACATGCAACATCGTTTGG AGGCTTTGGGCGTTTTGGCCAAAGCCGTTCGCTCTGCTCATGAAAGGGTT TTTGGCCAGACAGTAAGAAACTCTGGTCAGAAAGACAGCAGCGAAGGAAA GGAAGTAGCGTACTTTGGAGAGACGACAAAAGTTTTAAAGCATTCATTGA GCAAATGGAGGGCCAGGCAGGAAGAGTTGACTCAGGCATCACACAGCCTT ACCTGGGACATTGATGGGGTAGCCAAAGTATTTCATATTTTAGCGAGCAG ACTTTGTGAAGGTGGGGGCGCAAGCTTCGTTCAAATAGAAGGGAGGGACA TAGAACTATGGGCACAGGGTATCCTCACGTTGGCAACACTAGGATGTTAC GGAGGGTCAGGCGCTCAAGGCTCAGAGATGCGTTTTGTTGTGATCGAAAT TGCTATGCGGCGAGTGATGAAACTCAAAGCTGATGGCGCTGTGCGCCGTG CGCTCGCTCTGGCTCTTTCTATTGTGATAGGAGGAATGGGCGATCGAGAG GTGAGGGAAATATTGCTGGGAGGCGCTAGTGACGTGATCATCTTACCGGA CTATGATGAGGTTGTAGATATCGGCAGAGAAGCGTTTGAATGGCTACAGC GCGCAGCTGAGGGGGATGCCGATATTGGCGTGAGACGGTTTGCCGCGCTC ACGTTGCGGAAGTGGAGTCAGCGTGTGGAAGCCTTTGTAAAGTAG back to topprotein sequence of Gchil7571.t1 >Gchil7571.t1 ID=Gchil7571.t1|Name=Gchil7571.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=915bp
MTSFSEARTGWRESEVERLLVELSPNATNDQIIHVLSKVSAEVPRISSAP DVYSQVSQALLDKVCPCLLHSSPPFGNNVWMMFEDFFLKGNHAIAFRELC GALDVNSDVGEIVARILILFVTERTGGVSRLTEVLSRASGSKLVSYLLHL PSRVTNVLMSNSMTEYKKEDLIDEKEYFGTIAEAIFNQPSTSDITRDSVL KELVARMVTMKHAETLVHRSFLIGDMEKLLQLISFAPHRSISSLTWALLN QRIETGREEKEIHDCICKLLSRNPVARNSCIHVLPFQQPVFKRPKKSIRR LVRAVVYGCEIETAEDALITASEIWSGEMFASAENIAMQRQVTRTVLCYL KYFARLHSNTSSISNSVMMILVDGVHVRLGANDVRTRRHGMVIGEASSRF CKDKKVLNFEREGSASIRRMEKKTIGDESLEDGGDTDFSELAEQVGQDIS DLEDEQREFGEENEPTQKEIDVVKKSLSSGGKMEDDTMKLGARSLVTASL PTNRKPSCTKCLIWPQSNQHEEWQQEDDWSSIESYSRSSSSEDEDNALYG KRALKKDYIELRKKLSAPMSVPRLLGLLIEVNKSDGGSTIVDASVAAAAL RTLASRAESNFITHGTLRSAAVELCLELVRIDPERYPDVDVPDLSAARGE ALHKVVQMDIGSCGSALVERVICGKMSDMQHRLEALGVLAKAVRSAHERV FGQTVRNSGQKDSSEGKEVAYFGETTKVLKHSLSKWRARQEELTQASHSL TWDIDGVAKVFHILASRLCEGGGASFVQIEGRDIELWAQGILTLATLGCY GGSGAQGSEMRFVVIEIAMRRVMKLKADGAVRRALALALSIVIGGMGDRE VREILLGGASDVIILPDYDEVVDIGREAFEWLQRAAEGDADIGVRRFAAL TLRKWSQRVEAFVK* back to topmRNA from alignment at tig00000007_pilon:2053168..2055912- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil7571.t1 ID=Gchil7571.t1|Name=Gchil7571.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2745bp|location=Sequence derived from alignment at tig00000007_pilon:2053168..2055912- (Gracilaria chilensis NLEC103_M9 male) ATGACAAGCTTTTCGGAAGCCAGAACAGGTTGGCGTGAAAGTGAAGTCGA
ACGGCTGTTAGTAGAATTGAGCCCAAATGCCACTAATGACCAAATTATCC
ATGTCCTATCGAAAGTCAGTGCAGAAGTCCCGAGAATATCATCTGCTCCT
GATGTGTATTCTCAAGTGAGCCAAGCTTTATTAGACAAGGTTTGCCCTTG
CTTGCTTCATAGTTCACCACCATTTGGAAATAATGTGTGGATGATGTTCG
AAGACTTCTTCCTTAAGGGAAATCATGCCATTGCGTTTCGTGAATTGTGC
GGGGCACTTGATGTTAATTCTGATGTTGGCGAAATCGTTGCACGTATTCT
GATCTTGTTTGTGACTGAGAGAACTGGAGGGGTTTCTCGGTTGACAGAGG
TTCTTTCAAGGGCATCAGGCTCGAAACTAGTGAGTTATCTTCTTCATCTT
CCTTCGCGAGTCACTAATGTTCTGATGAGCAACTCAATGACAGAATACAA
AAAGGAGGATTTGATTGATGAGAAAGAGTATTTTGGAACAATAGCAGAAG
CCATATTCAACCAGCCTTCAACGTCAGATATTACGCGAGACAGCGTGCTC
AAGGAGTTGGTTGCGCGGATGGTAACAATGAAACACGCGGAAACTTTAGT
GCATCGCTCTTTTCTTATCGGGGACATGGAAAAGCTTTTGCAGCTGATAT
CGTTCGCGCCCCATCGATCCATTTCATCTCTCACGTGGGCATTGTTAAAT
CAAAGAATCGAGACCGGTCGAGAAGAGAAAGAAATTCACGACTGCATCTG
CAAGTTGCTTTCCCGAAATCCAGTTGCTCGGAACAGTTGCATCCATGTCC
TTCCATTTCAACAACCGGTTTTCAAGAGGCCGAAGAAATCCATCAGACGT
CTAGTTCGAGCTGTTGTATATGGGTGTGAGATAGAAACAGCAGAAGATGC
GTTAATAACAGCGTCAGAAATATGGAGTGGCGAAATGTTTGCATCAGCTG
AGAATATTGCCATGCAACGGCAAGTGACTCGAACTGTCTTGTGCTACTTG
AAGTACTTTGCAAGACTACATTCGAACACTAGTTCTATCTCGAATTCTGT
AATGATGATTCTGGTGGATGGTGTACATGTAAGATTAGGCGCAAATGATG
TTAGGACTCGACGCCATGGAATGGTCATTGGAGAAGCATCATCAAGGTTT
TGCAAAGACAAAAAAGTTTTAAACTTCGAAAGAGAGGGTTCTGCCAGTAT
TCGGAGAATGGAGAAGAAAACGATTGGAGACGAGAGCTTGGAAGACGGTG
GCGATACAGACTTTTCTGAACTAGCAGAACAAGTCGGACAGGATATTTCG
GACTTGGAAGATGAACAACGAGAATTTGGTGAAGAAAACGAACCAACCCA
AAAGGAAATCGATGTTGTGAAGAAATCTCTATCATCAGGAGGAAAAATGG
AGGACGACACGATGAAACTTGGTGCCAGGTCGCTAGTGACAGCCAGTCTT
CCAACAAACAGAAAACCCAGCTGTACGAAATGTCTTATCTGGCCGCAATC
AAATCAGCATGAAGAGTGGCAGCAAGAAGACGATTGGAGCAGCATAGAAT
CGTATTCGAGGTCGAGTTCATCAGAGGATGAAGACAACGCGTTGTATGGC
AAAAGGGCTCTAAAAAAAGACTACATTGAACTTAGGAAGAAGTTATCGGC
GCCCATGTCCGTACCTAGGCTGTTAGGACTGCTGATTGAAGTGAATAAGT
CCGACGGGGGAAGCACCATCGTCGACGCGAGTGTCGCAGCAGCAGCGTTG
CGAACGCTGGCCTCTCGAGCTGAATCAAACTTCATAACGCACGGTACCTT
GCGATCTGCGGCTGTAGAACTGTGCCTGGAACTTGTGCGGATCGATCCAG
AACGTTATCCCGATGTTGATGTACCAGACCTGTCCGCAGCGCGAGGCGAA
GCACTTCACAAGGTTGTGCAAATGGACATCGGTTCATGTGGTTCTGCTCT
TGTGGAACGTGTCATCTGCGGGAAAATGAGTGACATGCAACATCGTTTGG
AGGCTTTGGGCGTTTTGGCCAAAGCCGTTCGCTCTGCTCATGAAAGGGTT
TTTGGCCAGACAGTAAGAAACTCTGGTCAGAAAGACAGCAGCGAAGGAAA
GGAAGTAGCGTACTTTGGAGAGACGACAAAAGTTTTAAAGCATTCATTGA
GCAAATGGAGGGCCAGGCAGGAAGAGTTGACTCAGGCATCACACAGCCTT
ACCTGGGACATTGATGGGGTAGCCAAAGTATTTCATATTTTAGCGAGCAG
ACTTTGTGAAGGTGGGGGCGCAAGCTTCGTTCAAATAGAAGGGAGGGACA
TAGAACTATGGGCACAGGGTATCCTCACGTTGGCAACACTAGGATGTTAC
GGAGGGTCAGGCGCTCAAGGCTCAGAGATGCGTTTTGTTGTGATCGAAAT
TGCTATGCGGCGAGTGATGAAACTCAAAGCTGATGGCGCTGTGCGCCGTG
CGCTCGCTCTGGCTCTTTCTATTGTGATAGGAGGAATGGGCGATCGAGAG
GTGAGGGAAATATTGCTGGGAGGCGCTAGTGACGTGATCATCTTACCGGA
CTATGATGAGGTTGTAGATATCGGCAGAGAAGCGTTTGAATGGCTACAGC
GCGCAGCTGAGGGGGATGCCGATATTGGCGTGAGACGGTTTGCCGCGCTC
ACGTTGCGGAAGTGGAGTCAGCGTGTGGAAGCCTTTGTAAAGTAG back to topCoding sequence (CDS) from alignment at tig00000007_pilon:2053168..2055912- >Gchil7571.t1 ID=Gchil7571.t1|Name=Gchil7571.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2745bp|location=Sequence derived from alignment at tig00000007_pilon:2053168..2055912- (Gracilaria chilensis NLEC103_M9 male) ATGACAAGCTTTTCGGAAGCCAGAACAGGTTGGCGTGAAAGTGAAGTCGA ACGGCTGTTAGTAGAATTGAGCCCAAATGCCACTAATGACCAAATTATCC ATGTCCTATCGAAAGTCAGTGCAGAAGTCCCGAGAATATCATCTGCTCCT GATGTGTATTCTCAAGTGAGCCAAGCTTTATTAGACAAGGTTTGCCCTTG CTTGCTTCATAGTTCACCACCATTTGGAAATAATGTGTGGATGATGTTCG AAGACTTCTTCCTTAAGGGAAATCATGCCATTGCGTTTCGTGAATTGTGC GGGGCACTTGATGTTAATTCTGATGTTGGCGAAATCGTTGCACGTATTCT GATCTTGTTTGTGACTGAGAGAACTGGAGGGGTTTCTCGGTTGACAGAGG TTCTTTCAAGGGCATCAGGCTCGAAACTAGTGAGTTATCTTCTTCATCTT CCTTCGCGAGTCACTAATGTTCTGATGAGCAACTCAATGACAGAATACAA AAAGGAGGATTTGATTGATGAGAAAGAGTATTTTGGAACAATAGCAGAAG CCATATTCAACCAGCCTTCAACGTCAGATATTACGCGAGACAGCGTGCTC AAGGAGTTGGTTGCGCGGATGGTAACAATGAAACACGCGGAAACTTTAGT GCATCGCTCTTTTCTTATCGGGGACATGGAAAAGCTTTTGCAGCTGATAT CGTTCGCGCCCCATCGATCCATTTCATCTCTCACGTGGGCATTGTTAAAT CAAAGAATCGAGACCGGTCGAGAAGAGAAAGAAATTCACGACTGCATCTG CAAGTTGCTTTCCCGAAATCCAGTTGCTCGGAACAGTTGCATCCATGTCC TTCCATTTCAACAACCGGTTTTCAAGAGGCCGAAGAAATCCATCAGACGT CTAGTTCGAGCTGTTGTATATGGGTGTGAGATAGAAACAGCAGAAGATGC GTTAATAACAGCGTCAGAAATATGGAGTGGCGAAATGTTTGCATCAGCTG AGAATATTGCCATGCAACGGCAAGTGACTCGAACTGTCTTGTGCTACTTG AAGTACTTTGCAAGACTACATTCGAACACTAGTTCTATCTCGAATTCTGT AATGATGATTCTGGTGGATGGTGTACATGTAAGATTAGGCGCAAATGATG TTAGGACTCGACGCCATGGAATGGTCATTGGAGAAGCATCATCAAGGTTT TGCAAAGACAAAAAAGTTTTAAACTTCGAAAGAGAGGGTTCTGCCAGTAT TCGGAGAATGGAGAAGAAAACGATTGGAGACGAGAGCTTGGAAGACGGTG GCGATACAGACTTTTCTGAACTAGCAGAACAAGTCGGACAGGATATTTCG GACTTGGAAGATGAACAACGAGAATTTGGTGAAGAAAACGAACCAACCCA AAAGGAAATCGATGTTGTGAAGAAATCTCTATCATCAGGAGGAAAAATGG AGGACGACACGATGAAACTTGGTGCCAGGTCGCTAGTGACAGCCAGTCTT CCAACAAACAGAAAACCCAGCTGTACGAAATGTCTTATCTGGCCGCAATC AAATCAGCATGAAGAGTGGCAGCAAGAAGACGATTGGAGCAGCATAGAAT CGTATTCGAGGTCGAGTTCATCAGAGGATGAAGACAACGCGTTGTATGGC AAAAGGGCTCTAAAAAAAGACTACATTGAACTTAGGAAGAAGTTATCGGC GCCCATGTCCGTACCTAGGCTGTTAGGACTGCTGATTGAAGTGAATAAGT CCGACGGGGGAAGCACCATCGTCGACGCGAGTGTCGCAGCAGCAGCGTTG CGAACGCTGGCCTCTCGAGCTGAATCAAACTTCATAACGCACGGTACCTT GCGATCTGCGGCTGTAGAACTGTGCCTGGAACTTGTGCGGATCGATCCAG AACGTTATCCCGATGTTGATGTACCAGACCTGTCCGCAGCGCGAGGCGAA GCACTTCACAAGGTTGTGCAAATGGACATCGGTTCATGTGGTTCTGCTCT TGTGGAACGTGTCATCTGCGGGAAAATGAGTGACATGCAACATCGTTTGG AGGCTTTGGGCGTTTTGGCCAAAGCCGTTCGCTCTGCTCATGAAAGGGTT TTTGGCCAGACAGTAAGAAACTCTGGTCAGAAAGACAGCAGCGAAGGAAA GGAAGTAGCGTACTTTGGAGAGACGACAAAAGTTTTAAAGCATTCATTGA GCAAATGGAGGGCCAGGCAGGAAGAGTTGACTCAGGCATCACACAGCCTT ACCTGGGACATTGATGGGGTAGCCAAAGTATTTCATATTTTAGCGAGCAG ACTTTGTGAAGGTGGGGGCGCAAGCTTCGTTCAAATAGAAGGGAGGGACA TAGAACTATGGGCACAGGGTATCCTCACGTTGGCAACACTAGGATGTTAC GGAGGGTCAGGCGCTCAAGGCTCAGAGATGCGTTTTGTTGTGATCGAAAT TGCTATGCGGCGAGTGATGAAACTCAAAGCTGATGGCGCTGTGCGCCGTG CGCTCGCTCTGGCTCTTTCTATTGTGATAGGAGGAATGGGCGATCGAGAG GTGAGGGAAATATTGCTGGGAGGCGCTAGTGACGTGATCATCTTACCGGA CTATGATGAGGTTGTAGATATCGGCAGAGAAGCGTTTGAATGGCTACAGC GCGCAGCTGAGGGGGATGCCGATATTGGCGTGAGACGGTTTGCCGCGCTC ACGTTGCGGAAGTGGAGTCAGCGTGTGGAAGCCTTTGTAAAGTAG back to top
|