Gchil2385.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2385.t1
Unique NameGchil2385.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length231
Homology
BLAST of Gchil2385.t1 vs. uniprot
Match: A0A2V3ILB7_9FLOR (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILB7_9FLOR)

HSP 1 Score: 294 bits (753), Expect = 3.740e-98
Identity = 146/229 (63.76%), Postives = 175/229 (76.42%), Query Frame = 0
Query:    1 MTQGLSVVSRALLTAGSAAITFANPARADMLALLGDLTSGAATTQLVRRLQQSEEGRQMLTTQQPSRFPEHGSASLEALRALPPRTLGREYARFMDKHGFSPESRARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFEAAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVRYEHYLRHDVDELRRLWRVSVPNVHVRGLR 229
            MT  L+ V RALLT GSA +TFANPARAD LA+LGDLTSG A   L  R+++S EGRQML T  P+RFPEHGS SL  LRALP  TLGREYARFMD   F PESRA VRFV+D   +WV+QRYRDVHD+WHVLT +P TLLGETAQK+FEA+ TGLPV  LA  AG  R+    R++L + L+PWAL CGRGA DLLA+RYE YL  D++ELR  W ++VP+V ++G++
Sbjct:    1 MTAPLTPVGRALLTVGSALVTFANPARADTLAVLGDLTSGPALHHLTNRIKRSHEGRQMLQTLTPARFPEHGSGSLPELRALPAGTLGREYARFMDDRRFVPESRAVVRFVEDDTHRWVMQRYRDVHDLWHVLTAMPTTLLGETAQKLFEASQTGLPVTFLASVAGTARIGRKNRQILFSELVPWALSCGRGATDLLAIRYEDYLDRDLNELRTKWNITVPDVQLKGMK 229          
BLAST of Gchil2385.t1 vs. uniprot
Match: S0F3H3_CHOCR (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3H3_CHOCR)

HSP 1 Score: 267 bits (682), Expect = 2.080e-87
Identity = 134/230 (58.26%), Postives = 169/230 (73.48%), Query Frame = 0
Query:    1 MTQGLSVVSRALLTAGSAAITFANPARADMLALLGDLTSGAATTQLVRRLQQSEEGRQMLTTQQPSRFPEHGSASLEALRALPPRTLGREYARFMDKHGFSPESRARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFEAAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVRYEHYLRHDVDELRRLWRVSVPNVHVRGLRR 230
            M   LS+  R  L AG+A ++ ANPARAD++A+LGDLTS     +L RR+  + EGR ML    P+RFPEHGS SL A+R+LP  TLGREYARFMD   F+PESR+ VRFV D    WVLQRYRDVHDVWHVLTG+P T+LGE AQK FEAA TGLPVAV++   G +R++ +ERRVLVT L+PWA+  GR A DL+AV+YE  L   +++LR  W + VP+V ++GL+R
Sbjct:    1 MPPQLSIFGRTALAAGAAVVSLANPARADLIAVLGDLTSQPVLRRLRRRINSTPEGRSMLDALHPARFPEHGSDSLIAMRSLPNGTLGREYARFMDVRRFTPESRSAVRFVDDPVDAWVLQRYRDVHDVWHVLTGMPTTVLGELAQKWFEAAQTGLPVAVISAVFGPLRLKAEERRVLVTELVPWAVATGRRAPDLMAVKYEDRLEDSLEDLRTEWGIQVPDVKMKGLKR 230          
BLAST of Gchil2385.t1 vs. uniprot
Match: UPI001E1DEF35 (ubiquinone biosynthesis protein COQ4 homolog, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEF35)

HSP 1 Score: 185 bits (469), Expect = 9.360e-56
Identity = 92/164 (56.10%), Postives = 113/164 (68.90%), Query Frame = 0
Query:   65 PSRFPEHGSASLEALRALPPRTLGREYARFMDKHGFSPESR--ARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFEAAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVRYEHYLRHDVDELRRLWRVSVPNVHVR 226
            P  FPE   AS++ L ALP R+LGREYARFM    F P  R    VR V D    WVLQRYRDVHD+WHVL  +P TLLGE  QK FEA HTGLPVA+L+   G VR++  ERRVLV  L+PWAL+ G  A +LLA+RYE  L  D+D++RR W++ +PN ++R
Sbjct:    6 PGVFPE---ASMDELLALPERSLGREYARFMADRHFDPADRDPVDVRLVPDRDLAWVLQRYRDVHDMWHVLNAMPTTLLGELGQKWFEAVHTGLPVAILSSLMGPVRLKSTERRVLVRDLVPWALKAGTTAVNLLAIRYEDCLHRDIDDVRREWKIILPNSYLR 166          
BLAST of Gchil2385.t1 vs. uniprot
Match: A0A3P3YH64_PLABS (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YH64_PLABS)

HSP 1 Score: 182 bits (463), Expect = 2.240e-54
Identity = 99/211 (46.92%), Postives = 134/211 (63.51%), Query Frame = 0
Query:    5 LSVVSRALLTAGSAAITFANPARADMLALLGDLTSGAATTQ-LVRRLQQSEEGRQMLTTQQPSRFPEHGSASLEALRALPPRTLGREYARFMDKHGFSPESRARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFEAAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVRYEHYLRHDVDELRR 214
            LS   RAL+ AG+A     +P R D++ALLGD T+       L+ R+++SE GR++L  +      +  +  +EALRALP  T GR+YARFMD +GF  + R+ VRFV +    ++LQRYR  HD  HVL+GLPPT+LGE +QK FE   TGLP+  LA   G VR+   E+R L+TT  PWA+RC   +  +LAV +E +   DVDELRR
Sbjct:    3 LSGARRALVAAGAAVGALLDPHRGDLVALLGDTTAPPVLLDALLARMRRSEPGRRLLRDRPAV---DASTVDMEALRALPDTTFGRQYARFMDTYGFHADERSPVRFVDNPDHAFILQRYRQTHDFVHVLSGLPPTVLGEVSQKWFELLQTGLPMTALAALVGPVRLPFAEQRALLTTFFPWAVRCSLSSQFMLAVEFERHFDRDVDELRR 210          
BLAST of Gchil2385.t1 vs. uniprot
Match: A0A067BMW8_SAPPC (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BMW8_SAPPC)

HSP 1 Score: 172 bits (435), Expect = 1.080e-49
Identity = 96/210 (45.71%), Postives = 126/210 (60.00%), Query Frame = 0
Query:   12 LLTAGSAAIT-FANPARADMLALLGDLTSGAATTQLVRRLQQSEEGRQMLTTQQPSRFPEHGSASLEALRALPPRTLGREYARFMDKHGFSPESRARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFEAAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVRYEHYLRHDVDELRRLWRVSV 220
            LL A +AA++ FANP R DMLA LGD T   A  Q+  ++     G ++L  +   R        ++ALR+LP  + G  Y +FMD HGF  + RA VRFV DA+  +VLQRYR++HD WHVL GLPPT+  E A K  E   TGLPV  L+GF G +R+  DER+ L+ T +PWA R GR A  LL V YE      +++LRR   + V
Sbjct:   44 LLVAATAAVSVFANPERGDMLAALGDATGEVALRQMHLKMCSDPVGMEILAQKPRIRS---SVTDIDALRSLPTDSFGYAYTQFMDAHGFEADGRAHVRFVDDAELAYVLQRYRELHDFWHVLFGLPPTVFSEIALKYVELVQTGLPVCALSGFVGPLRLSCDERKELLGTFVPWAYRAGREAPCLLNVYYEREYETKLEDLRRRLNIRV 250          
BLAST of Gchil2385.t1 vs. uniprot
Match: A0A024TSI6_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TSI6_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.710e-49
Identity = 93/216 (43.06%), Postives = 123/216 (56.94%), Query Frame = 0
Query:    6 SVVSRALLTAGSAAITFANPARADMLALLGDLTSGAATTQLVRRLQQSEEGRQMLTTQQPSRFPEHGSASLEALRALPPRTLGREYARFMDKHGFSPESRARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFEAAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVRYEHYLRHDVDELRRLWRVSVP 221
            S V + ++  GSA    ANP R DMLA LGD+T   A   +  ++     G Q+LT  +  RF  +    ++ALR LP  T G  Y +FMD HGF  + RA V+FV D +  +V+QRYR++HD WHVL GLPPT+  E   K  E   TGLPV  L+G  G +R+   ER  L+ T +PWA R G  A  L+ V YEH     +DELR   R+ +P
Sbjct:   48 SPVQKIVVAVGSAVAVMANPERGDMLAALGDVTGAVAIRNMHLKMSSDPVGMQILT--EKPRFRSN-VVDIDALRDLPHNTFGYAYTQFMDAHGFEADGRAEVKFVDDPELAYVMQRYRELHDFWHVLFGLPPTVFSEIILKYVELVQTGLPVCTLSGLVGPLRLTSRERCQLLCTYIPWAYRAGHQAPFLMNVYYEHEFHTPLDELRARLRILLP 260          
BLAST of Gchil2385.t1 vs. uniprot
Match: A0A5J4Z4E9_PORPP (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4E9_PORPP)

HSP 1 Score: 170 bits (431), Expect = 4.970e-49
Identity = 94/221 (42.53%), Postives = 127/221 (57.47%), Query Frame = 0
Query:    5 LSVVSRALLTAGSAAITFANPARADMLALLGDLTSGAATTQLVRRLQQSEEGRQMLTTQQPSRFPEHGSASLEALRALPPRTLGREYARFMDKHGFSPESRARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFEAAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVRYEHYLRHDVDELRRLWRVSVPNVHV 225
            LSV+ R  L  GSA ++FA+P RAD++A LG+ T   A   L  R+ +S  GR++L  Q+   F +     L  L  LP  T G  YA++M  +GF  + R  VRFV D +  +++ RYR+ HD WH LT L PT+LGE  QK  EA HT LPVA L+  A    V    R+VL++ L+PWA+RCG    DLL+V YE     D+ ELR    V  P  ++
Sbjct:   33 LSVLGRMSLAVGSAVVSFADPRRADLVAALGETTGAPALRALRERMSRSPAGRRVL--QERYMFKDDVQKRLPQLLELPSSTFGHCYAKWMRAYGFRADERPDVRFVDDPELAYIMLRYRECHDFWHTLTALRPTVLGELGQKWMEAVHTRLPVATLSALASPAMVSSRNRKVLLSELVPWAVRCGSTCEDLLSVEYEKCFEVDIVELRTRLNVITPRSYL 251          
BLAST of Gchil2385.t1 vs. uniprot
Match: A0A6A4ZPM3_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZPM3_9STRA)

HSP 1 Score: 170 bits (430), Expect = 7.220e-49
Identity = 92/216 (42.59%), Postives = 124/216 (57.41%), Query Frame = 0
Query:    6 SVVSRALLTAGSAAITFANPARADMLALLGDLTSGAATTQLVRRLQQSEEGRQMLTTQQPSRFPEHGSASLEALRALPPRTLGREYARFMDKHGFSPESRARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFEAAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVRYEHYLRHDVDELRRLWRVSVP 221
            S + + ++  GSA   F NP R DMLA LGD+T   A  ++  ++     G Q+L   +  RF  +    ++ALR LP  T G  Y +FMD HGF  + RA V+FV D +  +V+QRYR++HD WHVL GLPPT   E A K  E   TGLPV  L+GF G +R+   ERR L+ T +PWA R G  A  L+ V YE      +D+LR   R+ +P
Sbjct:   43 SPLQKIVVAVGSAVSVFTNPERGDMLAALGDVTGAVALRKMHLKMSSDPVGMQILA--EKPRFRSN-VVDIDALRDLPRNTFGYAYTQFMDAHGFEADGRADVKFVDDPELAYVMQRYRELHDFWHVLFGLPPTEFSEIALKYVELVQTGLPVCTLSGFVGPLRLSSHERRQLLCTFIPWAYRAGHQAPFLMNVFYEREFNTPLDDLRARLRILLP 255          
BLAST of Gchil2385.t1 vs. uniprot
Match: A0A6U9Q4W4_9CHLO (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A6U9Q4W4_9CHLO)

HSP 1 Score: 171 bits (432), Expect = 1.270e-48
Identity = 96/215 (44.65%), Postives = 132/215 (61.40%), Query Frame = 0
Query:    5 LSVVSRALLTAGSAAITFANPARADMLALLGDLTSGAATTQLVRRLQQSEEGRQMLTTQQPSRFPEHGSASLEALRALPPRTLGREYARFMDKHGFSPESRARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFEAAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVRYEHYLRHDVDELRRLWRVS 219
            LS V+RALL+AG+A    A+PARAD++A LG+ T  AA  ++  R++ SE GR++L  +     P   S+ LE   +LP  T GR YA FM + GF  ++R  VRFV D +  +V  R R VHD+WHVL G     LGE A K FE +HTGLP+A L+     VR+   +RR L T  +PWAL  GR A DL+ + YE ++  D+  LR+ WR++
Sbjct:   92 LSPVARALLSAGAAVGALASPARADLVATLGETTGRAAFERMRERMKSSETGRKLLRER-----PLLNSSVLEHCGSLPEGTFGRSYASFMKRRGFDADARPPVRFVDDEELAYVAFRVRQVHDLWHVLFGCGTNALGELALKAFEFSHTGLPMAFLSVAGAQVRLSRYQRRRLFTEYVPWALLAGRRAVDLVPIAYEDHMHRDLASLRQQWRIT 301          
BLAST of Gchil2385.t1 vs. uniprot
Match: A0A7S0Q4G6_9EUKA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q4G6_9EUKA)

HSP 1 Score: 167 bits (423), Expect = 3.870e-48
Identity = 88/202 (43.56%), Postives = 123/202 (60.89%), Query Frame = 0
Query:   12 LLTAGSAAITFANPARADMLALLGDLTSGAATTQLVRRLQQSEEGRQMLTTQQPSRFPEHGSASLEALRALPPRTLGREYARFMDKHGFSPESRARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFEAAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVRYEHYLRHDVDELR 213
            L+T+ +A    A+P RAD++ ++G+ +   A   +  R+     GR +L   Q        +  L ALR++P  +LG EYARF+++H F P+ R+ VRFV DA   +V+ RYR VHD+WHVL  LPPT +GE A K  EAA TGLP+  +  FA  VR+RG +R  +V  +LPWA+R      DLL+V YE  L  D+DELR
Sbjct:   27 LITSSAALRALADPRRADLVGVVGEASGEHALRAMHTRMHAHPIGRSIL---QDRPLISKATMPLHALRSMPHGSLGAEYARFLERHQFDPDERSDVRFVDDADLAYVMLRYRQVHDLWHVLFALPPTFMGEVALKWLEAAQTGLPMCSVGAFAAGVRLRGHQRSFMVRHVLPWAMRHAASGVDLLSVYYERELERDLDELR 225          
The following BLAST results are available for this feature:
BLAST of Gchil2385.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILB7_9FLOR3.740e-9863.76Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
S0F3H3_CHOCR2.080e-8758.26Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
UPI001E1DEF359.360e-5656.10ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A3P3YH64_PLABS2.240e-5446.92Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A067BMW8_SAPPC1.080e-4945.71Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A024TSI6_9STRA2.710e-4943.06Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A5J4Z4E9_PORPP4.970e-4942.53Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6A4ZPM3_9STRA7.220e-4942.59Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6U9Q4W4_9CHLO1.270e-4844.65Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A7S0Q4G6_9EUKA3.870e-4843.56Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007715Ubiquinone biosynthesis protein Coq4PFAMPF05019Coq4coord: 5..221
e-value: 7.1E-65
score: 218.4
IPR007715Ubiquinone biosynthesis protein Coq4PANTHERPTHR12922UBIQUINONE BIOSYNTHESIS PROTEINcoord: 5..221
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..28
IPR027540Ubiquinone biosynthesis protein Coq4, eukaryotesHAMAPMF_03111Coq4coord: 1..221
score: 28.045868

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:304460..305152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2385.t1Gchil2385.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 304460..305152 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2385.t1 ID=Gchil2385.t1|Name=Gchil2385.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=231bp
MTQGLSVVSRALLTAGSAAITFANPARADMLALLGDLTSGAATTQLVRRL
QQSEEGRQMLTTQQPSRFPEHGSASLEALRALPPRTLGREYARFMDKHGF
SPESRARVRFVQDAQQQWVLQRYRDVHDVWHVLTGLPPTLLGETAQKMFE
AAHTGLPVAVLAGFAGCVRVRGDERRVLVTTLLPWALRCGRGAADLLAVR
YEHYLRHDVDELRRLWRVSVPNVHVRGLRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007715Coq4
IPR027540Coq4_euk