Gchil2585.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2585.t1
Unique NameGchil2585.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length666
Homology
BLAST of Gchil2585.t1 vs. uniprot
Match: A0A2V3IJL2_9FLOR (MICOS complex subunit MIC60 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJL2_9FLOR)

HSP 1 Score: 587 bits (1513), Expect = 4.400e-200
Identity = 368/692 (53.18%), Postives = 476/692 (68.79%), Query Frame = 0
Query:    1 MFRSSTTSAFLTNKRTLSTS-ASTSPPSXXXXXXXXAPTPAPRPSLVRRGTPILLVGFGTGLFLRQVYSDGEFRASVENAFPPSAKFFSQLFDLLPKSISGASLRTEPISKETTTKTSDNQKSASDSSTLPTTYHPINKVLQ---------------------------EAEASLNESSSTTDTNSDPTTSTEKEPSANHFDQVKPPNAQIAEHLVAKEQSAITDKQKQKPVAAIELPKVEPVNKENTTLPKPVPFPAIDMGDSAVGSEKEDKNGQNDAPVRSTKGKLARLLGKGDFEASRVISPDLVDDSEYMKPNLGNAPSISIFDSIPSAPELPIAGSTKALTVPASSVEQSKVSEQQQNEVEALRSEIRSQLKWEAVRLQEAVRSQLIEDKKIAAKEVSLMAEKHSEELTKVREDAMIQAERVLVERTLKIREEAQKQRDDELNKMLAEKESELRETLATEYAELQRTATEGRELALTAAKANVSAISGRFEALVEQTEKAKDAARRASSAFMLQENIASSQPFGKLLKDASGSELGRLVSESVPPSVASKGVSSVDHLKQDFRRASRRGLSAALVPESEKGTIWGHLLGAVFSRLKIPVDIRLASNEPPKTNEERIRLAKSFLDEGNLGGAVATLDSLNGLPGEMMADWLGDAKARIAAQQAAEVLLADAIIAQISLTKGEDVNMIS 664
            MFR S+  AFL  +R LSTS AS++            P PAP+ S VRR  P LL+G GTG FL +V SD EFR +VE AFPPSA+ FSQLFDL P  +    LR E       T+  +  K+ S++S++   Y  I   L                            E  A L++S++    + D   + + +  A+    ++P   +  +  +A EQ++ T      PV  +E  K                FP   M D+   SE E+K     APVRS K KLARLLGKGDFEA++V  PDLVDDSEYMKPN G AP+ISIFD +P     P+  STK  T   ++ +  K+ EQ+ +E+EALR+E+RSQLKWEAVRLQEAVRSQL+EDKK+AAKE S+MA+KHSEEL +VREDA+  AE+VL+ERT KI++EA+KQRDDEL+ +L EKE+ELRETL+TEYAEL+RT TE RELAL AA+ANVSA+S +F+ALV QTEKAK+AA+RASSAFML++++A+SQP G LLK+A+G  LG LV+ S+P +  S GV S+D LK +F+RAS+RGLSAALVPE+++GTIWGH LG++FSRLKIPVD RL S++PP+TNEERIRLA++ L+EG+LGGAVA L+SL+GL GE+M+DW+  AKARIAA+ AAEVLLADAIIAQI+LTKG++V  +S
Sbjct:    9 MFRLSSQPAFLAGRRALSTSNASSASSKNPTANSPPLPPPAPQKSFVRRAAPPLLLGLGTGYFLYKVNSDREFRRTVEQAFPPSARVFSQLFDLTPGPLPPPPLRRETAP----TRLDEKTKATSETSSIAPAYESIKTSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXETLAPLSDSTAPEKGSYDSKIAIQPKTEADRVLPIEPHRIESPKSEIALEQASSTP-----PVKFVETEK----------------FP---MNDTLEKSEAENK-----APVRSAKDKLARLLGKGDFEAAKVNGPDLVDDSEYMKPNWGAAPNISIFD-MPGEVAFPLDISTKTSTPAITADDSPKLREQRISEIEALRTELRSQLKWEAVRLQEAVRSQLVEDKKVAAKEASVMAQKHSEELARVREDAVKHAEKVLMERTRKIKQEAEKQRDDELSIILKEKEAELRETLSTEYAELRRTETEKRELALVAAEANVSAMSDKFDALVTQTEKAKEAAKRASSAFMLRDSVAASQPLGSLLKEATGDGLGELVAASIPSAAVSNGVLSLDGLKNNFKRASKRGLSAALVPENKQGTIWGHFLGSIFSRLKIPVDFRLFSDQPPQTNEERIRLAQNLLNEGDLGGAVAILESLDGLAGEVMSDWMCSAKARIAAELAAEVLLADAIIAQIALTKGDEVTTMS 666          
BLAST of Gchil2585.t1 vs. uniprot
Match: R7QRA6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRA6_CHOCR)

HSP 1 Score: 350 bits (899), Expect = 5.000e-110
Identity = 214/433 (49.42%), Postives = 298/433 (68.82%), Query Frame = 0
Query:  232 DMGDSAVGSEKEDKNGQNDAPVRSTKGKLARLLGKGDFEASRVISPDLVDDSEYMKPN----LGNAPSISIFDSIPSAPELPIAGSTKALTVPASSVEQSKVSEQQQNEVEALRSEIRSQLKWEAVRLQEAVRSQLIEDKKIAAKEVSLMAEKHSEELTKVREDAMIQAERVLVERTLKIREEAQKQRDDELNKMLAEKESELRETLATEYAELQRTATEGRELALTAAKANVSAISGRFEALVEQTEKAKDAARRASSAFMLQENIASSQPFGKLLKDASG-SELGRLVSESVPPSVASKGVSSVDHLKQDFRRASRRGLSAALVPESEKGTIWGHLLGAVFSRLKIPVDI-RLASNEPPKTNEERIRLAKSFLDEGNLGGAVATLDSLNGLPGEMMADWLGDAKARIAAQQAAEVLLADAIIAQISLTKGE 658
            D  +SA GS      G+      S K KLARLLGKGDF+A +V  PD+VDDS Y KPN    LG   S   +         P  G+ +    PA   E+  V+     E+ ALR E+ SQ+KWE VRLQEAVR+Q++ DK IAA+E +  A+KHSEELT+VREDA+  A+++L E++++++ +A  QRD ++ +++  KE E+RETL  EYA+ +R     R+ AL +AKA V+A++ +F+++V QTE+AK+AA+R S AF+L+E+I +S+P    + +A+G +ELG+LV+ESVP +    GVSS+D LK+DFR AS+RGLS A+VP  + GT+WGH LGA+FSRLKIP+D     SN P  +NEERIR A+  + +G+L  A+  LDSLNGL  ++M DW+G AKAR+AA  AAEVLLADAII Q+SLT+G+
Sbjct:   84 DDNESARGSRTGRGAGRGGT---SGKEKLARLLGKGDFQADKVEGPDVVDDSVYRKPNNAKLLGRQESRKPWKF--EGKRTPSPGTPRIGAKPA---EEDPVAV----EMNALRLELESQMKWEGVRLQEAVRAQMVADKTIAAREAAEFAKKHSEELTRVREDAITSADKMLREKSIELQAKADAQRDSDVARLIKVKEEEIRETLTLEYADKERKNVVERKKALASAKAQVAALNDQFDSVVAQTERAKEAAKRTSIAFLLRESILASRPLASQVTEAAGRTELGKLVAESVPTAAVMAGVSSIDALKEDFRDASKRGLSVAMVPPGKTGTLWGHFLGALFSRLKIPIDRWDNTSNAPLSSNEERIRRAERLVSDGDLSNAILILDSLNGLSADIMKDWIGAAKARVAADLAAEVLLADAIITQVSLTQGK 504          
BLAST of Gchil2585.t1 vs. uniprot
Match: M2XSV3_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSV3_GALSU)

HSP 1 Score: 72.0 bits (175), Expect = 1.890e-9
Identity = 46/143 (32.17%), Postives = 77/143 (53.85%), Query Frame = 0
Query:  512 LGRLVSESVPPSVASKGVSSVDHLKQDFRRASRRGLSAALVPESEKGTIWGHLLGAVFSRLKIPVDIRLASNEPPKTNEERIRLAKSFLDEGNLGGAVATLDSLNGLPGEMMADWLGDAKARIAAQQAAEVLLADAIIAQISL 654
            L  L+S ++P   A +G+ S   L   F R  +    AAL+PE +  ++W H++  V + LKIP  +    N+     E +I  A+ ++ + NL  AV  L+ LNGL  ++ +DWL  A+ R+  QQA +V  A  ++ + +L
Sbjct:  437 LSYLIS-TIPKEAAERGIPSEAELIHRFHRILKHLRRAALIPEEKVSSLWSHMVAYVIAWLKIPERVLSEGNDA----ESKISRAEYYVTKHNLLQAVRELEGLNGLCADLASDWLSLARWRVTVQQAVQVSRAFVVLEEEAL 574          
BLAST of Gchil2585.t1 vs. uniprot
Match: A0A1V9YGU2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGU2_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 2.510e-8
Identity = 58/174 (33.33%), Postives = 83/174 (47.70%), Query Frame = 0
Query:  486 SAFMLQENIASSQPFGK----LLKDASGSELGRLVSESVPPSVASKGVSSVDHLKQDFRRASRRGLSAALVPESEKGTIWGHLLGAVFSRLKIPVDIRLASNEPPKTNEERIRLAKSFLDEGNLGGAVATLDSLNGLPGEMMADWLGDAKARIAAQQAAEVLLADAIIAQISLT 655
            +A  L + I ++ P  K    L   A+G  L     +S+ P V  +G  SV  L+  F      G  AALVPE  KG + GHL       L IP    +  ++     E     A   L  G+L   VA LD L GLP E++ADW+  AK+R+A +Q ++V+ A   +   SL+
Sbjct:  476 AALALTDRIEAAAPLHKEIRALAAAAAGDNLLEAAVKSMAPHV--EGAPSVAQLQDRFGYVRNAGRRAALVPEEAKGMV-GHLFAGALLWLLIPPGGPIKGDDA----EAVFSRADYALRAGDLETTVAELDKLQGLPKEVVADWVAAAKSRLAIEQTSKVVKAHVSLLAASLS 642          
BLAST of Gchil2585.t1 vs. uniprot
Match: A0A7S0BJQ7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BJQ7_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 2.100e-6
Identity = 37/121 (30.58%), Postives = 65/121 (53.72%), Query Frame = 0
Query:  527 KGVSSVDHLKQDFRRASRRGLSAALVPESEKGTIWGHLLGAVFSRLKIPVDIRLASNEPPKTNEERIRLAKSFLDEGNLGGAVATLDSLNGLPGEMMADWLGDAKARIAAQQAAEVLLADA 647
            +G+ S+  L+  ++RAS+  L+AA++PE  + T    ++    S+ K+   I    N P       +  A   LD G+L  A++ L+ L+GLP E++ DW+ DA+ R+ A     + L +A
Sbjct:  165 EGIPSLAELQNQYKRASKESLAAAMIPEGRELTALSWIIAKALSKFKVRSHIP-GDNGPNSV----LGRAGDALDIGDLQVALSELERLDGLPKELLQDWISDAQGRLMADSMLSLSLQEA 280          
The following BLAST results are available for this feature:
BLAST of Gchil2585.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IJL2_9FLOR4.400e-20053.18MICOS complex subunit MIC60 n=1 Tax=Gracilariopsis... [more]
R7QRA6_CHOCR5.000e-11049.42Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2XSV3_GALSU1.890e-932.17Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A1V9YGU2_9STRA2.510e-833.33Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S0BJQ7_9RHOD2.100e-630.58Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 424..444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..254
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..47
IPR019133Mitochondrial inner membrane protein MitofilinPFAMPF09731Mitofilincoord: 322..647
e-value: 7.2E-27
score: 94.5
IPR019133Mitochondrial inner membrane protein MitofilinPANTHERPTHR15415MITOFILINcoord: 9..651

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:1699479..1701569 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2585.t1Gchil2585.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 1699479..1701569 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2585.t1 ID=Gchil2585.t1|Name=Gchil2585.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=666bp
MFRSSTTSAFLTNKRTLSTSASTSPPSSGTPPPPSAPTPAPRPSLVRRGT
PILLVGFGTGLFLRQVYSDGEFRASVENAFPPSAKFFSQLFDLLPKSISG
ASLRTEPISKETTTKTSDNQKSASDSSTLPTTYHPINKVLQEAEASLNES
SSTTDTNSDPTTSTEKEPSANHFDQVKPPNAQIAEHLVAKEQSAITDKQK
QKPVAAIELPKVEPVNKENTTLPKPVPFPAIDMGDSAVGSEKEDKNGQND
APVRSTKGKLARLLGKGDFEASRVISPDLVDDSEYMKPNLGNAPSISIFD
SIPSAPELPIAGSTKALTVPASSVEQSKVSEQQQNEVEALRSEIRSQLKW
EAVRLQEAVRSQLIEDKKIAAKEVSLMAEKHSEELTKVREDAMIQAERVL
VERTLKIREEAQKQRDDELNKMLAEKESELRETLATEYAELQRTATEGRE
LALTAAKANVSAISGRFEALVEQTEKAKDAARRASSAFMLQENIASSQPF
GKLLKDASGSELGRLVSESVPPSVASKGVSSVDHLKQDFRRASRRGLSAA
LVPESEKGTIWGHLLGAVFSRLKIPVDIRLASNEPPKTNEERIRLAKSFL
DEGNLGGAVATLDSLNGLPGEMMADWLGDAKARIAAQQAAEVLLADAIIA
QISLTKGEDVNMIST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019133Mt-IM_prot_Mitofilin