Gchil2659.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil2659.t1
Unique NameGchil2659.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length157
Homology
BLAST of Gchil2659.t1 vs. uniprot
Match: A0A2V3IMD8_9FLOR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD8_9FLOR)

HSP 1 Score: 279 bits (713), Expect = 1.590e-94
Identity = 121/156 (77.56%), Postives = 135/156 (86.54%), Query Frame = 0
Query:    1 MSTVIKSFVTEARWRGLWGTIRAIKLNKMGTMHCYVGEDKFNNRFFENRKETYGRDRWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPGSEPVRSDVGSGKDVYDLK 156
            M+   K+ + E RWRGLWGT+RAIK+NKMGTM C+VGEDKF NRFFEN+ ETYGRDRWVEYVDDRNPDS KIT EWHAWLHH +DEPPT+ PLPKPIYQAEETGNPTGTR+AYVPPHHKLAKNS+G ASEKYESW+PGSE   ++V   KDV DLK
Sbjct:    1 MAATFKALMAELRWRGLWGTVRAIKMNKMGTMQCFVGEDKFKNRFFENKNETYGRDRWVEYVDDRNPDSLKITPEWHAWLHHNVDEPPTDHPLPKPIYQAEETGNPTGTREAYVPPHHKLAKNSVGSASEKYESWRPGSEAADTEVDDRKDVLDLK 156          
BLAST of Gchil2659.t1 vs. uniprot
Match: R7QPI6_CHOCR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPI6_CHOCR)

HSP 1 Score: 231 bits (590), Expect = 9.480e-76
Identity = 102/158 (64.56%), Postives = 123/158 (77.85%), Query Frame = 0
Query:    1 MSTVIKSFVTEARWRGLWGTIRAIKLNKMGTMHCYVGEDKFNNRFFENRKETYGRDRWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKP-GSEPVRSDVGSGKD-VYDLK 156
            M++ I+S V EARWRGLWGT+RAIK+NKMGTM CYVGED F NR+FE+R ETYGRDRWVEYVD+RNPDS K+  EWHAWLHH  D+ P++ PLP+P+Y+   +GNPTGTRDAYVPPHH+L+K   G ASEKYE+W P G +         +D V DLK
Sbjct:    1 MASAIRSLVAEARWRGLWGTVRAIKMNKMGTMSCYVGEDTFQNRYFEDRTETYGRDRWVEYVDERNPDSLKVEPEWHAWLHHNTDDAPSQHPLPRPVYEKPSSGNPTGTRDAYVPPHHRLSKKFDGNASEKYETWAPQGRKKAEGGKPDSEDKVLDLK 158          
BLAST of Gchil2659.t1 vs. uniprot
Match: A0A7S1TNU8_9RHOD (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TNU8_9RHOD)

HSP 1 Score: 166 bits (419), Expect = 1.340e-49
Identity = 79/159 (49.69%), Postives = 102/159 (64.15%), Query Frame = 0
Query:    3 TVIKSFVTEARWRGLWGTIRAIKLNKMGTMHCYVGEDKFNNRFFENRKETYGRDRWVEYVDDRNP--DSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPGSEPVRSDV---GSGKDVYDLK 156
            +++   V EA+WRG WGT+RA+K+NK G+    VGED   NR+FENR  +YGR RWVEY + R+   DS KI  EWHAW+ +I DE P+  P  KP YQAE T N TGT+D YV  H  +AK+  G A EK  +W P +   R+ +     GKD+YDLK
Sbjct:   10 SLVSCVVEEAKWRGFWGTVRALKMNKFGSKPNLVGEDALGNRYFENRAMSYGRHRWVEYAEQRHVSFDSVKIPPEWHAWVSYISDELPSRTPPAKPAYQAEITRNMTGTKDRYVSNHSLMAKHYSGRAREKVRAWDPSAARTRTALDLPADGKDIYDLK 168          
BLAST of Gchil2659.t1 vs. uniprot
Match: M2Y2Q1_GALSU (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2Q1_GALSU)

HSP 1 Score: 154 bits (388), Expect = 6.560e-45
Identity = 72/158 (45.57%), Postives = 93/158 (58.86%), Query Frame = 0
Query:   11 EARWRGLWGTIRAIKLNKMGTMHCYVGEDKFNNRFFENRKETYGRDRWVEYVD-DRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPGSEPV-----------RSDVGSGKDVYDLK 156
            E RWRGLWGT +A K+N++GTM  +VGED+F+NR+F+   +   +DRWVEY   D  PD   +  EWHAWLHH IDEPPT  P  +PIYQ +   N TGT DAY P ++ L+KN  G A +K E W                   ++    +DV DLK
Sbjct:   10 EIRWRGLWGTFQAAKMNRLGTMKYFVGEDEFHNRYFQKVNDVMLKDRWVEYASKDFTPDPYSLPPEWHAWLHHSIDEPPTRTPFQRPIYQGQIVANRTGTTDAYFPKNNPLSKNFKGLAKDKLEQWNGNVSTTSVVNRVSRSFRNNETKEERDVLDLK 167          
BLAST of Gchil2659.t1 vs. uniprot
Match: A0A5J4Z0L7_PORPP (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0L7_PORPP)

HSP 1 Score: 141 bits (356), Expect = 4.780e-40
Identity = 69/155 (44.52%), Postives = 92/155 (59.35%), Query Frame = 0
Query:    9 VTEARWRGLWGTIRAIKLNKMGTMHCYVGEDKFNNRFFENRKETYGRDRWVEYVDDRNP--DSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPG---SEPVRSDVGSG--KDVYDLK 156
            + EA+WRGLWGT+RAIK+ K G+    VGED+F NR+FEN  ET+GR RWVEY   R+   D+ ++   WHAW+ ++ DEP      P P YQ   T N TGT + Y+ P+  L+K   G A +K  +W P    S P    V +   +DV DLK
Sbjct:   14 LAEAKWRGLWGTVRAIKMGKFGSHKYMVGEDEFGNRYFENPHETWGRHRWVEYAGQRHITFDAVQVPPRWHAWISYVSDEPGNTASTPDPTYQGAVTANLTGTENRYISPYSPLSKMFHGRAPDKISAWNPAQRRSPPGLEQVANPAKQDVLDLK 168          
BLAST of Gchil2659.t1 vs. uniprot
Match: A0A7S3A0X4_9RHOD (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A0X4_9RHOD)

HSP 1 Score: 136 bits (342), Expect = 5.120e-38
Identity = 63/155 (40.65%), Postives = 92/155 (59.35%), Query Frame = 0
Query:    5 IKSFVTEARWRGLWGTIRAIKLNKMGTMHCYVGEDKFNNRFFENRKETYGRDRWVEYVD---DRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPGSEPVRSDVGSGKDVYDLK 156
            +   V +AR RG W T+ A+K  ++G+    VG D+  NR++EN     GR+RWVEY         D+ KI +EWH W+H ++DEPP+ +P+  P YQ E  GN +GT+DAY   ++  +K+ +G A  K E W P S+  +  +G  KDV DLK
Sbjct:    8 VTGMVQDARERGFWSTVDALKYGRLGSAEYLVGVDEVGNRYYENPNAIIGRERWVEYYGIEKKTGTDALKIPAEWHMWVHRMVDEPPSRRPVEHPKYQGEIEGNLSGTKDAYYSQYYVKSKDFVGRAGSKIEPWNP-SQKRKPLLGPEKDVLDLK 161          
BLAST of Gchil2659.t1 vs. uniprot
Match: A0A7S1TEA9_9RHOD (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TEA9_9RHOD)

HSP 1 Score: 134 bits (337), Expect = 2.380e-37
Identity = 66/154 (42.86%), Postives = 92/154 (59.74%), Query Frame = 0
Query:    5 IKSFVTEARWRGLWGTIRAIKLNKMGTMHCYVGEDKFNNRFFENRKETYGRDRWVEYVDDR--NPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPGSEPVRSDVGSGKDVYDLK 156
            I+  + E R RG W  +RA+K +++G+    VGED   NR++ENR ++YGRDRWV+Y + R    D  K+   WHAWL H++DE P++ P+  P YQ E T N TG+  AYV P   L+    G    K E+W PG+   R+   + KDV DLK
Sbjct:    4 IRGLMQEMRTRGFWEVVRAVKGHRLGSSKHLVGEDHLGNRYYENRGDSYGRDRWVDYKEARPLRFDPLKVPPAWHAWLAHMVDEAPSKHPVAIPKYQGEITENFTGSSRAYVQPSSPLSPRFAGPERGKLETWTPGN---RASNSADKDVLDLK 154          
BLAST of Gchil2659.t1 vs. uniprot
Match: A0A7S3A345_9RHOD (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A345_9RHOD)

HSP 1 Score: 104 bits (260), Expect = 7.080e-26
Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 0
Query:    5 IKSFVTEARWRGLWGTIRAIKLNKMGTMHCYVGEDKFNNRFFENRKETYGRDRWVEYVD---DRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQAEETGNPTGTR 110
            +   V +AR RG W T+ A+K  ++G+    VG D+  NR++EN     GR+RWVEY         D+ KI +EWH W+H ++DEPP+ +P+  P YQ E  GN +GT+
Sbjct:    8 VTGMVQDARERGFWSTVDALKYGRLGSAEYLVGVDEVGNRYYENPNAIIGRERWVEYYGIEKKTGTDALKIPAEWHMWVHRMVDEPPSRRPVEHPKYQGEIEGNLSGTK 116          
BLAST of Gchil2659.t1 vs. uniprot
Match: A0A7J7IPH3_9RHOD (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IPH3_9RHOD)

HSP 1 Score: 107 bits (268), Expect = 1.460e-25
Identity = 52/126 (41.27%), Postives = 72/126 (57.14%), Query Frame = 0
Query:   15 RGLWGTIRAIKLNKMGTMH-CYVGEDKFNNRFFENRKETYGRDRWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPT--EKPLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGG-ASEKYESWK 136
            RG WGT+ AI+  ++G    C VGED+F NR++ENR  +Y RDRW EY D +N D   +  EWHAWLHH +D+PP   E    +P +      N +GT  AY P +   +   +G  A+   E W+
Sbjct:  130 RGFWGTLHAIRSGRIGMYDSCLVGEDEFGNRYYENRNASYMRDRWCEYKDPKNADPMYMPPEWHAWLHHFVDDPPVSAEAKWVRPTFVKPPHPNYSGTSLAYAPRNSPRSPVYVGHLATSAVEPWE 255          
BLAST of Gchil2659.t1 vs. uniprot
Match: M1VGP3_CYAM1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VGP3_CYAM1)

HSP 1 Score: 108 bits (271), Expect = 1.670e-25
Identity = 55/136 (40.44%), Postives = 76/136 (55.88%), Query Frame = 0
Query:    5 IKSFVTEARWRGLWGTIRAIKLNKMGTMH-CYVGEDKFNNRFFENRKETYGRDRWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEK--PLPKPIYQAEETGNPTGTRDAYVPPHHKLAKNSIGG-ASEKYESWK 136
            +K+   E   RG WGT+ AI+  ++G    C VG D+F NR++ENR  +Y RDRW EY D +N D   I  EWHAWLHH +D+PP        +P++      N +GT  AY P +   +   IG  A+   ESW+
Sbjct:  188 LKALWAEYPKRGFWGTLMAIRTGRVGMYDTCLVGIDEFGNRYYENRAASYMRDRWCEYRDGKNADPVCIPPEWHAWLHHFVDDPPVSANDKWVRPLFVKPPHPNYSGTSQAYAPRNSPRSPAYIGHLATSVVESWQ 323          
The following BLAST results are available for this feature:
BLAST of Gchil2659.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMD8_9FLOR1.590e-9477.56NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
R7QPI6_CHOCR9.480e-7664.56NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S1TNU8_9RHOD1.340e-4949.69NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
M2Y2Q1_GALSU6.560e-4545.57NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A5J4Z0L7_PORPP4.780e-4044.52NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S3A0X4_9RHOD5.120e-3840.65NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S1TEA9_9RHOD2.380e-3742.86NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7S3A345_9RHOD7.080e-2641.28NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
A0A7J7IPH3_9RHOD1.460e-2541.27NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
M1VGP3_CYAM11.670e-2540.44NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PFAMPF05071NDUFA12coord: 35..137
e-value: 1.0E-26
score: 93.8
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PANTHERPTHR12910NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2coord: 2..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..156
NoneNo IPR availablePANTHERPTHR12910:SF2NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12coord: 2..140

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004400_piloncontigtig00004400_pilon:2227579..2228129 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil2659.t1Gchil2659.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004400_pilon 2227579..2228129 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil2659.t1 ID=Gchil2659.t1|Name=Gchil2659.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=157bp
MSTVIKSFVTEARWRGLWGTIRAIKLNKMGTMHCYVGEDKFNNRFFENRK
ETYGRDRWVEYVDDRNPDSSKITSEWHAWLHHIIDEPPTEKPLPKPIYQA
EETGNPTGTRDAYVPPHHKLAKNSIGGASEKYESWKPGSEPVRSDVGSGK
DVYDLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007763NDUFA12