Gchil9999.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9999.t1
Unique NameGchil9999.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length299
Homology
BLAST of Gchil9999.t1 vs. uniprot
Match: A0A2V3IHP7_9FLOR (GrpE protein homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHP7_9FLOR)

HSP 1 Score: 345 bits (885), Expect = 3.500e-116
Identity = 193/304 (63.49%), Postives = 234/304 (76.97%), Query Frame = 0
Query:    1 MDCRPSPFAFAPSASTLYTPILGFCGSVNKLHPPTSVRQSKRFSRARIVALGPTSSPPPSSESDDGRDKKESPELELEPATHPDP--ETQPQSVEELTANDILNSPSFLKKKLEIVQKELTDAQNEIEQAEEALKEEKGRYVRLAADFENYRRRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASYQAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQFQRGYRLGDALIRPAIVAVSTGPGPAEEKEGEGKD----GVTDDTEEIEQPV 298
            M+  PS  AFA SA TL +    FC +V    P  +VR  +R +RARIVALGP++ PPPS+E +      E+PELE+E  T PD   +++P S++E+TA+DILNSPSFLKKKLEIVQKEL +A+  IE+ E+A+KEEKG+YVRLAADFENYRRRS+EDLRKQ  KSTAKVCKEIL VLDNFERAI  V+ ETE+EKSIS+SYQAIN+QLL++L KLKVEP+D VGE FDPS HEAIQK+ES +  EDVVCQQFQRGY LGD LIRPA+VAVS+GPGP  E   +  D    G  ++  E+EQPV
Sbjct:    1 MERTPSKLAFAASAGTLSSSTSAFCIAVTAFRPSGTVRSGRRCNRARIVALGPSAPPPPSNEPE------EAPELEVESQT-PDTASDSEPDSLQEVTADDILNSPSFLKKKLEIVQKELNEAKAAIEEGEDAVKEEKGKYVRLAADFENYRRRSMEDLRKQGAKSTAKVCKEILQVLDNFERAIAAVQPETEREKSISSSYQAINRQLLDALTKLKVEPMDAVGETFDPSLHEAIQKVESEEFNEDVVCQQFQRGYCLGDVLIRPAVVAVSSGPGPEGESASDASDDQSEGFAEEAGEVEQPV 297          
BLAST of Gchil9999.t1 vs. uniprot
Match: R7QNW1_CHOCR (GrpE protein homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNW1_CHOCR)

HSP 1 Score: 247 bits (631), Expect = 2.150e-77
Identity = 129/190 (67.89%), Postives = 152/190 (80.00%), Query Frame = 0
Query:   94 ELTANDILNSPSFLKKKLEIVQKELTDAQNEIEQAEEALKEEKGRYVRLAADFENYRRRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASYQAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQFQRGYRLGDALIRPAIVAVSTGPGPAEEKEGEG 283
            E+TA+DILNSP+FL+KKLEIVQKEL DA++ + +  EA++ EK RYVRLAADFENYRRRS EDLRKQD KST KVCKEI+ VLDNF+RAI  V  ETE+EK I+ SYQ+INKQL ++L KL V PID +G VFDP  HEAIQKLES +H EDVVC Q+QRGY++ + LIR AIV VS GPGPA     EG
Sbjct:   90 EVTADDILNSPAFLRKKLEIVQKELMDAKDALGEDSEAMQAEKDRYVRLAADFENYRRRSAEDLRKQDTKSTVKVCKEIVTVLDNFDRAIEAVTPETEREKIINNSYQSINKQLADALTKLNVMPIDAIGSVFDPEMHEAIQKLESEEHHEDVVCAQYQRGYKIEETLIRAAIVGVSQGPGPAVADGAEG 279          
BLAST of Gchil9999.t1 vs. uniprot
Match: A0A7S1XHP5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XHP5_9RHOD)

HSP 1 Score: 185 bits (469), Expect = 1.250e-54
Identity = 104/195 (53.33%), Postives = 136/195 (69.74%), Query Frame = 0
Query:   99 DILNSPSFLKKKLEIVQKELTDAQNEIEQAEEALKEEKGRYVRLAADFENYRRRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASYQAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQFQRGYRLGDALIRPAIVAVSTGPGPAEEKEGEGKDGVTDDTEE 293
            ++LNSP FLKK LE+V+K+L +A NE E A   ++E+K  + RLAADFEN+RRRS E+  + +  + A++ K+ L VLDNFERA T V  +T++E+SI +S+QAINKQLL+   KLKVEPID  GE FDPS  EAI  +ES +  E  V QQ QRGYR+GD ++R A+  VS+GPGPAE       D  TDD  E
Sbjct:   10 ELLNSPVFLKKSLELVKKDLQEAVNEKEVALAQVEEQKEAFKRLAADFENFRRRSSEEATQLEQAAAARILKQFLPVLDNFERAATAVVVDTDRERSILSSFQAINKQLLDGFRKLKVEPIDIAGEKFDPSSMEAISSVESAEIAEGYVLQQLQRGYRIGDRVLRAAMCIVSSGPGPAE------SDPTTDDPSE 198          
BLAST of Gchil9999.t1 vs. uniprot
Match: A0A7S0ZHI3_9RHOD (GrpE protein homolog n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHI3_9RHOD)

HSP 1 Score: 180 bits (456), Expect = 1.340e-51
Identity = 93/186 (50.00%), Postives = 129/186 (69.35%), Query Frame = 0
Query:  100 ILNSPSFLKKKLEIVQKELTDAQNEIEQAEEALKEEKGRYVRLAADFENYRRRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASYQAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQFQRGYRLGDALIRPAIVAVSTGPGPAEEKEGEGKD 285
            +LNSP FL KKLEIVQKEL++    ++  +  LK EK  Y+RLAAD EN+R+RS  +L    N++T  V K++L VLDNFE A   V  +T+ EK+I +SY A+NKQLL+ L+KL VEPI+ +G  FDP   EAIQ  +S ++ E+ V  Q +RGY+LG+ ++RPA+V VS+GPGP + +  E  D
Sbjct:   80 MLNSPEFLSKKLEIVQKELSEQHALVDSLQAELKSEKDSYLRLAADLENFRKRSRSELNDSSNRATVTVLKQLLNVLDNFELAENAVNPKTDAEKAIKSSYSALNKQLLDMLVKLNVEPIETIGAEFDPMVMEAIQMQQSTEYAENKVLYQMKRGYKLGELVVRPALVVVSSGPGPDQTESAETPD 265          
BLAST of Gchil9999.t1 vs. uniprot
Match: A0A5J4YHA7_PORPP (GrpE protein homolog n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHA7_PORPP)

HSP 1 Score: 179 bits (453), Expect = 5.720e-51
Identity = 93/173 (53.76%), Postives = 127/173 (73.41%), Query Frame = 0
Query:  100 ILNSPSFLKKKLEIVQKELTDAQNEIEQAEEALKEEKGRYVRLAADFENYRRRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASYQAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQFQRGYRLGDALIRPAIVAVSTG 272
            +LNSP FL+KKLE++QKEL + +   E+ E ALK EK  Y+RLAADFEN+RRR+  DL    N++T  V K +L VLDNFE A T +  +TE E+SI  SY+A+NKQLL+ L+KLKVEP++ VG  FDP+  EAI +  S++++E +V  Q +RGY+LGD ++RPA+V VS G
Sbjct:  122 LLNSPEFLRKKLEVLQKELAEERAATEKMEAALKNEKESYLRLAADFENFRRRTAADLTDSGNRATVTVLKSLLTVLDNFELAETALAPKTEGEESIMKSYKALNKQLLDVLVKLKVEPVEAVGVEFDPNVMEAITQQPSDEYEEGIVSAQMKRGYKLGDLVVRPAMVVVSMG 294          
BLAST of Gchil9999.t1 vs. uniprot
Match: M2X9Z6_GALSU (Molecular chaperone GrpE (Plastid) n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X9Z6_GALSU)

HSP 1 Score: 178 bits (452), Expect = 1.350e-50
Identity = 86/177 (48.59%), Postives = 129/177 (72.88%), Query Frame = 0
Query:   99 DILNSPSFLKKKLEIVQKELTDAQNEIEQAEEALKEEKGRYVRLAADFENYRRRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASYQAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQFQRGYRLGDALIRPAIVAVSTGPGP 275
            DIL SPSFLK+KLE+VQ+EL +++ E  + E+   ++K  Y+RL A+FENYR+R  ++ +     + A V +E++ VLDNFERA   +   TE E+ I  SYQA+ KQLL++++KL VEPID VG+ F+P+ HEA+ +++S  H+E +V  Q+QRGY++G+ L+RPA+  VS+GPGP
Sbjct:  112 DILQSPSFLKRKLELVQQELEESKAETSKWEKQYHDQKEAYIRLVAEFENYRKRMNKEKQDIAEVTKANVIRELIAVLDNFERAAAAIIVNTESEQKIHDSYQALAKQLLDAMMKLNVEPIDAVGQPFNPNLHEAVNRVDSEDHEEGIVAMQYQRGYKIGERLVRPALCVVSSGPGP 288          
BLAST of Gchil9999.t1 vs. uniprot
Match: A0A7S0BQY9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQY9_9RHOD)

HSP 1 Score: 174 bits (440), Expect = 2.950e-49
Identity = 90/184 (48.91%), Postives = 133/184 (72.28%), Query Frame = 0
Query:   90 QSVEELTANDILNSPSFLKKKLEIVQKELTDAQNEIEQAEEALKEEKGRYVRLAADFENYRRRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASYQAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQFQRGYRLGDALIRPAIVAVSTGP 273
            + VEE+  NDILNSP+ LKK++E++Q EL ++Q E E+ E  L+  K  ++RL+ADFEN+RRRS  ++ +   K++ K+ KE L VLD+FERA +GV  ETE+E  I+ +YQ+INKQ + +L KL ++PI+ +G  F+   H AIQ+ ES+++ + +V  QFQRGY++G  LIRPA+V VS GP
Sbjct:   62 EEVEEV--NDILNSPAMLKKRIEVLQAELDESQVERERLERELELGKESFIRLSADFENFRRRSSAEILESTEKASVKITKEFLTVLDSFERAASGVNPETEREAKINNAYQSINKQFVNTLEKLNIDPIEALGTPFNAEIHSAIQQQESSEYDDGIVMMQFQRGYKVGQRLIRPAMVMVSMGP 243          
BLAST of Gchil9999.t1 vs. uniprot
Match: A0A7S0WCA5_9CRYP (GrpE protein homolog n=2 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WCA5_9CRYP)

HSP 1 Score: 174 bits (440), Expect = 6.520e-49
Identity = 93/185 (50.27%), Postives = 124/185 (67.03%), Query Frame = 0
Query:  101 LNSPSFLKKKLEIVQKELTDAQNEIEQAEEALK----------EEKGRYVRLAADFENYRRRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASYQAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQFQRGYRLGDALIRPAIVAVSTGPGP 275
            L+SP FLK+K+EI++KEL+DAQ +    ++ +K          E K  Y+RLAADFEN+RRRS  DL    N +   V K+++ VLDNFE A   VK ET+KE+SI +SY A+ KQL  SL KL V  IDP+GE F+P  H+AIQ+ ES ++ E  VCQ  QRGY++G+  +R A+V VS GPGP
Sbjct:  107 LDSPEFLKRKIEILEKELSDAQADTASLDDLVKRNILKTSSAAELKDTYIRLAADFENFRRRSATDLTNAKNAALTSVLKDMVTVLDNFELAAANVKPETDKEESIKSSYDALGKQLTNSLTKLGVVAIDPLGEEFNPMLHDAIQQAESTEYAEGKVCQALQRGYKVGEQTLRAAVVVVSAGPGP 291          
BLAST of Gchil9999.t1 vs. uniprot
Match: A0A7S0EVZ3_9CRYP (GrpE protein homolog n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EVZ3_9CRYP)

HSP 1 Score: 173 bits (439), Expect = 1.110e-48
Identity = 83/142 (58.45%), Postives = 111/142 (78.17%), Query Frame = 0
Query:  139 YVRLAADFENYRRRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASYQAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQFQRGYRLGDALIRPAIVAVSTGPGPAEEKE 280
            Y+RLAADFENYR+R+  DL + ++ +T  V KE+L VLD FERA   +K ETEKE+SI+ SYQA+NK+LL+ L KL VE I+P+G+ FDP+ H AIQ+LES ++KE+VVCQ  QRGY++ D ++RPA+V VS+GPGP E  E
Sbjct:  159 YIRLAADFENYRKRAASDLVRANDMATVNVVKELLVVLDTFERAGASIKCETEKEQSINNSYQAVNKELLKVLTKLNVEAIEPLGQEFDPNMHNAIQQLESKEYKENVVCQALQRGYKIADRVVRPALVVVSSGPGPEESGE 300          
BLAST of Gchil9999.t1 vs. uniprot
Match: L1J1H7_GUITC (GrpE protein homolog (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J1H7_GUITC)

HSP 1 Score: 173 bits (438), Expect = 1.230e-48
Identity = 82/142 (57.75%), Postives = 113/142 (79.58%), Query Frame = 0
Query:  139 YVRLAADFENYRRRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASYQAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQFQRGYRLGDALIRPAIVAVSTGPGPAEEKE 280
            Y+RLAADFENYR+R+  DL + ++ +T  V KE+L VLD FERA + +K ET++E+SI+ SYQA+NK+LL+ L KL VE I+P+G+ FDP+ H AIQ+LES ++KE+VVCQ  QRGY++GD ++RPA+V VS+GPGP E  E
Sbjct:  150 YIRLAADFENYRKRTASDLVRANDMATVNVVKELLVVLDTFERAGSAIKCETDREQSINNSYQAVNKELLKVLNKLNVEAIEPLGQEFDPNMHNAIQQLESKEYKENVVCQALQRGYKIGDRVVRPALVVVSSGPGPEESGE 291          
The following BLAST results are available for this feature:
BLAST of Gchil9999.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHP7_9FLOR3.500e-11663.49GrpE protein homolog n=1 Tax=Gracilariopsis chorda... [more]
R7QNW1_CHOCR2.150e-7767.89GrpE protein homolog n=1 Tax=Chondrus crispus TaxI... [more]
A0A7S1XHP5_9RHOD1.250e-5453.33Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0ZHI3_9RHOD1.340e-5150.00GrpE protein homolog n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YHA7_PORPP5.720e-5153.76GrpE protein homolog n=1 Tax=Porphyridium purpureu... [more]
M2X9Z6_GALSU1.350e-5048.59Molecular chaperone GrpE (Plastid) n=1 Tax=Galdier... [more]
A0A7S0BQY9_9RHOD2.950e-4948.91Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0WCA5_9CRYP6.520e-4950.27GrpE protein homolog n=2 Tax=Hemiselmis tepida Tax... [more]
A0A7S0EVZ3_9CRYP1.110e-4858.45GrpE protein homolog n=1 Tax=Hanusia phi TaxID=303... [more]
L1J1H7_GUITC1.230e-4857.75GrpE protein homolog (Fragment) n=1 Tax=Guillardia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..145
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..99
NoneNo IPR availablePANTHERPTHR21237:SF27GRPE PROTEIN HOMOLOGcoord: 86..280
IPR000740GrpE nucleotide exchange factorPRINTSPR00773GRPEPROTEINcoord: 140..156
score: 44.85
coord: 250..269
score: 47.34
coord: 168..183
score: 42.58
coord: 223..238
score: 47.46
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 110..271
e-value: 3.6E-40
score: 137.3
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 86..280
IPR000740GrpE nucleotide exchange factorPROSITEPS01071GRPEcoord: 226..269
IPR000740GrpE nucleotide exchange factorHAMAPMF_01151GrpEcoord: 68..271
score: 17.389006
IPR000740GrpE nucleotide exchange factorCDDcd00446GrpEcoord: 133..269
e-value: 4.48105E-43
score: 142.26
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 104..212
e-value: 2.0E-20
score: 74.6
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 118..212
IPR009012GrpE nucleotide exchange factor, headGENE3D2.30.22.10Head domain of nucleotide exchange factor GrpEcoord: 216..270
e-value: 2.6E-17
score: 64.5
IPR009012GrpE nucleotide exchange factor, headSUPERFAMILY51064Head domain of nucleotide exchange factor GrpEcoord: 216..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:216649..217545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9999.t1Gchil9999.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004442_pilon 216649..217545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9999.t1 ID=Gchil9999.t1|Name=Gchil9999.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=299bp
MDCRPSPFAFAPSASTLYTPILGFCGSVNKLHPPTSVRQSKRFSRARIVA
LGPTSSPPPSSESDDGRDKKESPELELEPATHPDPETQPQSVEELTANDI
LNSPSFLKKKLEIVQKELTDAQNEIEQAEEALKEEKGRYVRLAADFENYR
RRSVEDLRKQDNKSTAKVCKEILGVLDNFERAITGVKAETEKEKSISASY
QAINKQLLESLIKLKVEPIDPVGEVFDPSFHEAIQKLESNQHKEDVVCQQ
FQRGYRLGDALIRPAIVAVSTGPGPAEEKEGEGKDGVTDDTEEIEQPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000740GrpE
IPR013805GrpE_coiled_coil
IPR009012GrpE_head