Gchil9395.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil9395.t1
Unique Name	Gchil9395.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	433

Homology

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BLAST of Gchil9395.t1 vs. uniprot
Match: A0A2V3IN47_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN47_9FLOR)

HSP 1 Score: 475 bits (1223), Expect = 3.160e-163
Identity = 259/435 (59.54%), Postives = 316/435 (72.64%), Query Frame = 0

Query:    1 MPLVGLDITRYKPARQLSHYGTLGVTDTGSVRALKLLSDEVVQYLEDSGVNSSLWNGSKGEFGREYDSNKAH--FSPPRDRQSLFQRYMDLRKDLPSQKALEQLNNNLEIQMRTQRQIITSVYEIEKELEELRKIRQQCTREENRNSVKLVDLAQKITRLESDCAVSKATADKIKNKVNQTRNQISESETGYLRRIALLRCLVHSMGKDERPNNRSKADMNEDKRLAREADGVSGRTCTDYLQVKRVYIDAKTGVLHLYNLERVLKGVLEHLEVCVRNSSAPLVESNSQLASTRTIYIRRQWALAKSNFDTALPFLKNTSLISARGMVEEQLQSHE---AIPSNPRIRDTGVFNKHPLLLPSYARMKIRHLFSRKSFLIQLHRTTAKAYKEINLLYDCHERTVKEALEALQEKEVENRRAHDELIKRWESLLGIQ 430
            MPL GLDITRYK  R L HYG L V DTGSV A + L + VV  L + G N ++W+G+KG  GR+Y +NKA   F   R+RQ L  RY+DLR  LPS K LE+L+ NLEIQMRTQRQ+ +SVYEIE+ELE+L K R  C       S +  +L ++I RLESD  +SK +A+KI  KV +TR  +SE ETGYLRR+A+LRCLV  M KDE PNNRSK +MNE +R+AREAD  SGRTC DYLQ+KRVYIDAKTG+LHLYNLE +LKG+L+HLEV  R+S   L ES       R  Y+ +QW+LA+SNF T LPFLKNTSLISARG+ +EQL   E        P  RD  +F+  P LLPS  R+ + +LF+R+S +IQLHR+ AKAY+EINLLYDCHERTVKEA E LQE+EV+NRRAHD+LI +WE LLGIQ
Sbjct:    1 MPLFGLDITRYKSVRPLFHYGELDVLDTGSVTASRRLPENVVALLREIGTNVAVWDGTKGILGRDYVTNKASTSFVKGRERQRLLDRYIDLRNGLPSPKDLEKLHVNLEIQMRTQRQVNSSVYEIERELEQLNKARDSCQTNHGEAS-RFEELTRQIERLESDRTLSKTSAEKINAKVKETRLHLSEGETGYLRRLAILRCLVSGMSKDETPNNRSKGEMNEHRRVAREADEKSGRTCLDYLQIKRVYIDAKTGLLHLYNLEGILKGILQHLEVSTRSSQNSLGESIRPSKEYRMGYVHQQWSLAESNFRTMLPFLKNTSLISARGIADEQLDEVERNGTTNDRPGGRDVSIFDDVPRLLPSSIRIGLCYLFTRRSRIIQLHRSAAKAYREINLLYDCHERTVKEAFEVLQEREVDNRRAHDDLISKWEDLLGIQ 434

The following BLAST results are available for this feature:

BLAST of Gchil9395.t1 vs. uniprot

BLAST of Gchil9395.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IN47_9FLOR	3.160e-163	59.54	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 120..143
None	No IPR available	COILS	Coil	Coil	coord: 391..418
None	No IPR available	COILS	Coil	Coil	coord: 96..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..226

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004370_pilon	contig	tig00004370_pilon:3744774..3746072 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil9395.t1	Gchil9395.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004370_pilon 3744774..3746072 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil9395.t1 ID=Gchil9395.t1|Name=Gchil9395.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=433bp
MPLVGLDITRYKPARQLSHYGTLGVTDTGSVRALKLLSDEVVQYLEDSGV
NSSLWNGSKGEFGREYDSNKAHFSPPRDRQSLFQRYMDLRKDLPSQKALE
QLNNNLEIQMRTQRQIITSVYEIEKELEELRKIRQQCTREENRNSVKLVD
LAQKITRLESDCAVSKATADKIKNKVNQTRNQISESETGYLRRIALLRCL
VHSMGKDERPNNRSKADMNEDKRLAREADGVSGRTCTDYLQVKRVYIDAK
TGVLHLYNLERVLKGVLEHLEVCVRNSSAPLVESNSQLASTRTIYIRRQW
ALAKSNFDTALPFLKNTSLISARGMVEEQLQSHEAIPSNPRIRDTGVFNK
HPLLLPSYARMKIRHLFSRKSFLIQLHRTTAKAYKEINLLYDCHERTVKE
ALEALQEKEVENRRAHDELIKRWESLLGIQSD*