Gchil9394.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9394.t1
Unique NameGchil9394.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length99
Homology
BLAST of Gchil9394.t1 vs. uniprot
Match: A0A2V3IN78_9FLOR (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN78_9FLOR)

HSP 1 Score: 142 bits (358), Expect = 3.040e-42
Identity = 69/98 (70.41%), Postives = 85/98 (86.73%), Query Frame = 0
Query:    1 MSSLKSTPERRQYKRVPNLSRKDPNAPLFDSILAREQRTRETMVAVEETKLLAEKLKECYREEGVNHYVKCEQVARAYMKRIATPGFQDSPIEMSDIQ 98
            MS+ K    RR+YK VP++SRKDPN   FD+ILA+EQRTRE ++A+EETKLLAEK+KEC R EGVNHY KCEQ+ARAY+KRI+TPGF+DSP+EMSDI+
Sbjct:    1 MSTEKVHSGRRKYKPVPDVSRKDPNVSPFDAILAKEQRTREALIAMEETKLLAEKVKECRRREGVNHYEKCEQIARAYLKRISTPGFKDSPVEMSDIE 98          
BLAST of Gchil9394.t1 vs. uniprot
Match: R7Q747_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q747_CHOCR)

HSP 1 Score: 97.1 bits (240), Expect = 2.520e-24
Identity = 51/94 (54.26%), Postives = 66/94 (70.21%), Query Frame = 0
Query:    8 PER---RQYKRVPNLSRKDPNAPLFDSILAREQRTRETMVAVEETKLLAEKLKECYREEGVNHYVKCEQVARAYMKRIATPGFQDSPIEMSDIQ 98
            PER   R++K VP++   DP A  F   LAREQR RE MVA+EET++L E+L  CY+ EGVNH VKCE +ARAY +RI   G +  P+E+SDI+
Sbjct:    2 PERKVKREFKPVPDVRPDDPGADPFQIALAREQRAREAMVAIEETRILGERLAHCYQTEGVNHLVKCEALARAYYRRITRSGLK-GPVELSDIE 94          
BLAST of Gchil9394.t1 vs. uniprot
Match: A0A1X2HIH6_SYNRA (Uncharacterized protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HIH6_SYNRA)

HSP 1 Score: 65.5 bits (158), Expect = 7.100e-12
Identity = 35/75 (46.67%), Postives = 47/75 (62.67%), Query Frame = 0
Query:    8 PERRQYKRVPNLSRKDPNAPLFDSILAREQRTRETMVAVEETKLLAEKLKECYREEGVNHYVKCEQVARAYMKRI 82
            PE +Q++RVP L + D  +       AR Q+ R+  V   E +LL EKL ECYR EGVNHY KC ++A AY+K +
Sbjct:    9 PEHKQFERVPTLDQVD-RSDRKAVYAARNQKIRDDWVKAMEGRLLKEKLDECYRTEGVNHYNKCREIADAYLKAV 82          
BLAST of Gchil9394.t1 vs. uniprot
Match: C1EFZ4_MICCC (Nadh-ubiquinone oxidoreductase n=2 Tax=Micromonas TaxID=38832 RepID=C1EFZ4_MICCC)

HSP 1 Score: 65.5 bits (158), Expect = 8.440e-12
Identity = 34/77 (44.16%), Postives = 47/77 (61.04%), Query Frame = 0
Query:   23 DPNAPLFDSILA---REQRTRETMVAVEETKLLAEKLKECYREEGVNHYVKCEQVARAYMKRIATPGFQDSPIEMSD 96
            DP+ PL D + A   RE   RE MV +E  KLL E+++ECY+ EGVNHY  C++  +AY++ I   G   S I  +D
Sbjct:   20 DPSDPLADKVAAIAQREHVVREKMVKIETAKLLRERVQECYKMEGVNHYQNCKEEVKAYLESIKNVGVHRSNIGPND 96          
BLAST of Gchil9394.t1 vs. uniprot
Match: A0A367KLM9_RHIST (Uncharacterized protein n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KLM9_RHIST)

HSP 1 Score: 64.7 bits (156), Expect = 1.290e-11
Identity = 38/87 (43.68%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    1 MSSLKSTPERRQYKRVPNLSRKDPNAPLFDS---ILAREQRTRETMVAVEETKLLAEKLKECYREEGVNHYVKCEQVARAYMKRIAT 84
            MS     PE RQ++RVP L + DP+    DS     AR Q+ R+  V   E +L+ EKL ECYR EGVNHY  C  +A  Y+  + T
Sbjct:    1 MSESWEYPEHRQFERVPTLDQVDPS----DSKAVYAARNQKIRDDWVKAMEARLIKEKLDECYRTEGVNHYQSCRHLADMYLATLKT 83          
BLAST of Gchil9394.t1 vs. uniprot
Match: A0A8H7V247_9FUNG (Uncharacterized protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7V247_9FUNG)

HSP 1 Score: 64.3 bits (155), Expect = 2.120e-11
Identity = 37/80 (46.25%), Postives = 47/80 (58.75%), Query Frame = 0
Query:    8 PERRQYKRVPNLSRKDPNAPLFDS---ILAREQRTRETMVAVEETKLLAEKLKECYREEGVNHYVKCEQVARAYMKRIAT 84
            PE +Q++RVP L + DP+    DS     AR Q+ R+  V V E +L+ EKL ECYR EGVNHY  C  +A  Y   I T
Sbjct:   12 PEHKQFERVPTLDQVDPS----DSKAIYAARNQKIRDDWVKVMEARLIKEKLDECYRTEGVNHYNSCRHLADMYFSTIKT 87          
BLAST of Gchil9394.t1 vs. uniprot
Match: A0A0B7MY87_9FUNG (Uncharacterized protein n=7 Tax=Mucoraceae TaxID=34489 RepID=A0A0B7MY87_9FUNG)

HSP 1 Score: 63.9 bits (154), Expect = 2.920e-11
Identity = 34/77 (44.16%), Postives = 45/77 (58.44%), Query Frame = 0
Query:    8 PERRQYKRVPNLSRKDPNAPLFDSILAREQRTRETMVAVEETKLLAEKLKECYREEGVNHYVKCEQVARAYMKRIAT 84
            PE +Q++RVP L + DPN        AR Q+ R+  V   E +++ EKL ECYR EGVNHY  C  +A  Y+  I T
Sbjct:   11 PEHKQFERVPTLDQVDPNDRKA-IYAARNQKIRDDWVKAMEARIIKEKLDECYRTEGVNHYKSCRDLADMYLASIKT 86          
BLAST of Gchil9394.t1 vs. uniprot
Match: A0A8H7ER27_9FUNG (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7ER27_9FUNG)

HSP 1 Score: 63.9 bits (154), Expect = 3.070e-11
Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 0
Query:    8 PERRQYKRVPNLSRKDPNAPLFDSILAREQRTRETMVAVEETKLLAEKLKECYREEGVNHYVKCEQVARAYMKRIA---TPGFQDSP 91
            PE +Q++RVP L + DPN        AR Q+ R+  V   E +++ EKL ECYR EGVNHY  C  ++  Y+K +      GF+  P
Sbjct:   10 PEHQQFERVPTLDQVDPN-DRKGIYAARAQKIRDDWVKAMEARIIKEKLDECYRTEGVNHYQNCRDLSDLYLKALKENKVQGFRKKP 95          
BLAST of Gchil9394.t1 vs. uniprot
Match: A0A8H7S0K7_9FUNG (Uncharacterized protein n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S0K7_9FUNG)

HSP 1 Score: 63.5 bits (153), Expect = 4.040e-11
Identity = 34/75 (45.33%), Postives = 45/75 (60.00%), Query Frame = 0
Query:    8 PERRQYKRVPNLSRKDPNAPLFDSILAREQRTRETMVAVEETKLLAEKLKECYREEGVNHYVKCEQVARAYMKRI 82
            P+ +Q++RVP L + DPN        AR Q+ R+  V   E +L+ EKL ECYR EGVNHY  C  +A  Y+K I
Sbjct:    9 PQHQQFERVPTLDQVDPNDRKA-IYAARAQKIRDDWVKAMEGRLIKEKLDECYRTEGVNHYASCRHLADMYLKSI 82          
BLAST of Gchil9394.t1 vs. uniprot
Match: A0A1C7NGT9_9FUNG (NADH-ubiquinone oxidoreductase subunit, mitochondrial n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NGT9_9FUNG)

HSP 1 Score: 60.8 bits (146), Expect = 4.600e-10
Identity = 35/86 (40.70%), Postives = 48/86 (55.81%), Query Frame = 0
Query:    8 PERRQYKRVPNLSRKDPNAPLFDSILAREQRTRETMVAVEETKLLAEKLKECYREEGVNHYVKCEQVARAY---MKRIATPGFQDS 90
            PE +Q++RVP L + DP+        AR Q+ R+  V   E +++ EKL ECYR EGVNHY  C  +A  Y   +K     GF+ S
Sbjct:   10 PEHKQFERVPTLDQVDPSDRKA-IYAARNQKIRDDWVKAMEARIIKEKLDECYRTEGVNHYQSCRHLADLYFDALKNNKVTGFRKS 94          
The following BLAST results are available for this feature:
BLAST of Gchil9394.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IN78_9FLOR3.040e-4270.41NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
R7Q747_CHOCR2.520e-2454.26Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X2HIH6_SYNRA7.100e-1246.67Uncharacterized protein n=1 Tax=Syncephalastrum ra... [more]
C1EFZ4_MICCC8.440e-1244.16Nadh-ubiquinone oxidoreductase n=2 Tax=Micromonas ... [more]
A0A367KLM9_RHIST1.290e-1143.68Uncharacterized protein n=1 Tax=Rhizopus stolonife... [more]
A0A8H7V247_9FUNG2.120e-1146.25Uncharacterized protein n=1 Tax=Mucor saturninus T... [more]
A0A0B7MY87_9FUNG2.920e-1144.16Uncharacterized protein n=7 Tax=Mucoraceae TaxID=3... [more]
A0A8H7ER27_9FUNG3.070e-1140.23Uncharacterized protein n=1 Tax=Apophysomyces ossi... [more]
A0A8H7S0K7_9FUNG4.040e-1145.33Uncharacterized protein n=1 Tax=Mucor circinatus T... [more]
A0A1C7NGT9_9FUNG4.600e-1040.70NADH-ubiquinone oxidoreductase subunit, mitochondr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019377NADH-ubiquinone oxidoreductase, subunit 10PFAMPF10249NDUFB10coord: 11..80
e-value: 6.2E-5
score: 23.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
IPR039993NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10PANTHERPTHR13094NADH-UBIQUINONE OXIDOREDUCTASE PDSW SUBUNITcoord: 10..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3743731..3744218 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9394.t1Gchil9394.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3743731..3744218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9394.t1 ID=Gchil9394.t1|Name=Gchil9394.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=99bp
MSSLKSTPERRQYKRVPNLSRKDPNAPLFDSILAREQRTRETMVAVEETK
LLAEKLKECYREEGVNHYVKCEQVARAYMKRIATPGFQDSPIEMSDIQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019377NADH_UbQ_OxRdtase_su10
IPR039993NDUFB10