Gchil9378.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
Overview
Homology
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A2V3IV42_9FLOR (Transcription-repair-coupling factor n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV42_9FLOR) HSP 1 Score: 922 bits (2382), Expect = 0.000e+0 Identity = 461/712 (64.75%), Postives = 551/712 (77.39%), Query Frame = 0 Query: 160 LNPGCLVVHSQHGIGRFLGLERTVGSQGATQEYAVVSYRDGEF--------MTRCLRVVGCAQVNR---------------------------------------------------SPFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGNNSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVFCKAAKKWQRRGSPKESDAKKRDLVESLYD 812 L LV+H++HGIGRF+GLER + GA QEYAVVSYRDGE M R L AQV R PFP+D+ AE F +CPF LT+DQ++AV+Q+L D+S R PMDRLLCGDVGFGKTEVA+RAAFRA+ AGKQVA+LAPTTILAHQHYETFK+R HYPQY I C+TRF+ +R + +AR A+ G C +A+GTHMLL D++SF +GLLIVDEEHRFGVNQKEKIR RY +DTL LSATPIPRTLHL L GLRD S+LREAPEGRKPIAT V +GAG VRRAIS E+ RGGQ+FFVVPR+DGID+TA+WLR +FP LR+LVAHGQ S +E R+W F +GKYD+LVCTTIIENGINMP VNTI+V+DATRFGLAQLHQLRGRVGRS RQA+AWFLYS S+GG+ +AVQRL+TLE++NELGSGF+IAQKDMEMRGVGTVLGVEQHGN+SVEA EYA+MLAEELEHIRTG P+PL+LP+++ VEVFLPVSSLIPE+FVP+ D+KM AY+ALSAA++ K L+ +A +++ARYGTLP TIRHISVLELK+FAKE+GIRR+ SERQHV L+WAL+E AFK+L+AF+ D+ R+RLEHL LEERV+VRGLG+CSGDVQL K+R LLK KAAK W RRG E+D++ L+++LYD Sbjct: 4 LRQDALVLHARHGIGRFIGLERANSAAGAPQEYAVVSYRDGELYVPLSQLEMLRTLSTDDAAQVRRLDNMQPDLLQRRRKARSSKARYLARRRARDHIRRQLVNLHHLYASRHHVTRHPFPVDQHAEQLFFDACPFTLTNDQHLAVQQVLSDLSDRHIPMDRLLCGDVGFGKTEVAIRAAFRALSAGKQVAVLAPTTILAHQHYETFKQRFLPHYPQYHIACMTRFMPKRTITDARAAVEQGVCRIAIGTHMLLSDTISFAHIGLLIVDEEHRFGVNQKEKIRSRYHGIDTLFLSATPIPRTLHLTLNGLRDASILREAPEGRKPIATYVYPKGAGVVRRAISAEISRGGQIFFVVPRIDGIDTTADWLRDMFPNLRILVAHGQTSGLEQRIWHFVTGKYDMLVCTTIIENGINMPHVNTIIVHDATRFGLAQLHQLRGRVGRSDRQAYAWFLYSESSGGRCMQAVQRLRTLEQFNELGSGFRIAQKDMEMRGVGTVLGVEQHGNHSVEATEYARMLAEELEHIRTGQPIPLSLPVTDTVEVFLPVSSLIPEEFVPDVDEKMAAYTALSAAKTGKELLYVANKMRARYGTLPGSTIRHISVLELKMFAKELGIRRVVSERQHVILEWALEEEAFKSLMAFIEDKQARSRLEHLVLEERVVVRGLGICSGDVQLGKLRSLLKGLTKAAKSWPRRGGDGENDSQSHKLIDALYD 715
BLAST of Gchil9378.t1 vs. uniprot
Match: R7Q730_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q730_CHOCR) HSP 1 Score: 723 bits (1866), Expect = 7.600e-247 Identity = 362/598 (60.54%), Postives = 451/598 (75.42%), Query Frame = 0 Query: 215 VNRSPFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGNNSVEAAEYAQMLAEELEHIRTGDPLPLTLPIS-EMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVFCKAAKKWQRRGSPKESDAKKRDLVESLY 811 + R PFP+DE AE F C F LT+DQ A KQI+ DMS PMDRLLCGDVGFGKTEVA+RAAFR + AGKQVA+LAPTTILA QHY+TF+ R E + ++ C+TRF +R+ +E R + G VA+GTHMLL D F +LGLLIVDEEHRFGVNQKEKIR RY+ +D L +SATPIPRTLHL L+GLRD S+LR P GRKP+ T V GAG VR AI+ E+ RGGQVFFVVPR++GI++ A+W+R LFP L+VLVAHG ++D+EHR+W FA +YDVLVCTTIIENGINMPDVNTI+V DA +FGLAQLHQLRGRVGRS QA+A+ LY+ S +A + RL+ LE+Y++LG+GF IAQ+DMEMRGVGT+LGVEQHGNNS+E EYA ML+EELEH RTG P+P+ +P EV+LP++SLIP D++ +FDQKMTAY LS A S K++ ++ K L++RYG LP T RH+SV+ELKL K +GI RI +ERQHV L+W +DE AF L+AF+ D+ R R EH EERV++RGLG+CSGDVQLAK+R L F KAA R+ + D +LV++L+ Sbjct: 362 IERPPFPVDEEAEQRFNLECGFVLTEDQEAATKQIMRDMSKNRRPMDRLLCGDVGFGKTEVAVRAAFRVLAAGKQVAILAPTTILAQQHYDTFRSRFEGASVKIAMACMTRFTSRKINIENRDRVCSGEVRVAIGTHMLLNDKCIFPDLGLLIVDEEHRFGVNQKEKIRARYRGIDALFMSATPIPRTLHLTLSGLRDASVLRTPPPGRKPVITKVSPSGAGIVRAAITREVERGGQVFFVVPRIEGIEALADWVRDLFPGLKVLVAHGSINDLEHRIWAFAQKEYDVLVCTTIIENGINMPDVNTIIVQDAGKFGLAQLHQLRGRVGRSDVQAYAFLLYASSGACQAVHTLDRLRALERYSDLGAGFAIAQRDMEMRGVGTILGVEQHGNNSIEGEEYAMMLSEELEHARTGKPIPVAMPNPVTSTEVYLPIASLIPADYITDFDQKMTAYGQLSRALSMKAVNSVVKGLESRYGPLPTSTRRHVSVMELKLSGKPLGITRIFAERQHVILEWPIDEPAFNCLVAFLPDKQSRDRCEHKVDEERVIIRGLGICSGDVQLAKLRVYLNCFNKAASGLLRQSDRYQPDPT--ELVDTLH 957
BLAST of Gchil9378.t1 vs. uniprot
Match: UPI001E1D48A5 (transcription-repair-coupling factor-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D48A5) HSP 1 Score: 662 bits (1708), Expect = 1.220e-228 Identity = 329/539 (61.04%), Postives = 415/539 (76.99%), Query Frame = 0 Query: 252 DMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLE---AHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGNNSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVFCKAA 787 D+S ++ PMDRLLCGDVGFGKTEVA+R AFR ++ +QVA+LAPTTILA QHYE F+ R E AH+P + CLTRF +R+ +LEARQ I G + VGTHMLLG++ F LGLLIVDEEHRFGVNQKEK+R ++KDVDTL LSATPIPRTLHLAL+GLRDTS+L+ APEGRKP+ T V GAG VRRA+++E+ R GQ+F+VVPR++GID+TA W+ L P RVLVAHG D+E R+ FASG++DVLVCT+IIENGINMP VNT+++ DA RFG+AQLHQLRGRVGR QA+AW LYS GG + A +RL L +++ LG+GF IAQ+DMEMRGVGTVLGVEQHGN+S++A EY++ML EELE RTG P+ L+LP SE E++LPV+S IP +++P+ D+KM AY LS ++S K L L+ RYG PAP RHI ++ LKL AK +GIR+I +RQHV LDWA+DE + K L+AF+ D+ R R E + EERVL+RGLG+CSGD+QLAK+ L +F K+A Sbjct: 3 DISEKSRPMDRLLCGDVGFGKTEVALRCAFRVLLGDRQVAILAPTTILAQQHYEVFRSRFEELSAHFP---VACLTRFGSRKALLEARQQIASGEVRIIVGTHMLLGETTKFHNLGLLIVDEEHRFGVNQKEKLRCKHKDVDTLFLSATPIPRTLHLALSGLRDTSILKTAPEGRKPVVTKVAAAGAGLVRRALTLELDRAGQIFYVVPRIEGIDATASWVSGLCPNARVLVAHGSHKDLERRILAFASGQFDVLVCTSIIENGINMPRVNTMIIQDAARFGMAQLHQLRGRVGRCEVQAYAWLLYSNRPGGDSLSARERLDALARFSGLGAGFAIAQRDMEMRGVGTVLGVEQHGNSSMDAEEYSKMLIEELESARTGIPVQLSLPTSETCEIYLPVASYIPPEYIPSLDEKMVAYGILSGSKSIKELNEAGFDLERRYGPFPAPLQRHICIMRLKLLAKSLGIRKILVQRQHVVLDWAIDEPSLKRLVAFLKDKRARTRFEVVEDEERVLIRGLGICSGDLQLAKLLQWLDIFGKSA 538
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A5J4Z1B2_PORPP (Transcription-repair-coupling factor n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1B2_PORPP) HSP 1 Score: 506 bits (1303), Expect = 9.750e-163 Identity = 300/696 (43.10%), Postives = 406/696 (58.33%), Query Frame = 0 Query: 162 PGCLVVHSQHGIGRFLGLERTVGSQGATQEYAVVSYRDGEFM-----------------------------------------TRCLRVVGC----------------AQVNRSPFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPV-RRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGN-NSVEAAEYAQMLAEELEHIRT------------GDPLPLTLPISEMVEVFLPVSSLIPEDFVP-NFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVL-ELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEP-MRARLEHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVF 783 PG LV H ++G+GRF ++ + Q + QE+A +SY DG+ + +R R V A R P + + E F + P+ +TDDQ A+K IL DMS R PMDRLLCGDVGFGKTEVAMRA FRA+ +G QV LLAPTTILAHQHY+T RL+ HYPQ+ + +TRFV + E +AI G V VGTH ++G V F +LGLL+VDEEHRFGVNQKEK+R ++ +D L+LSATPIPRTLH++++GLRD S++R P RK + T + V R AI +E+ R GQ+F+VVPR+ + + L LFP LR++ AH ++ D+E RV DFA G DVL+CTTIIENGI++P VNTI+++ AT+FGLAQLHQLRGRVGRS +QA+A+ L + +R+ L + +ELGSGF +A KDME+RGVG ++GVEQ G +E EY +L EELE R+ L P + +V +PVS+ +P ++V N D+K+ Y+AL+ S + L + L +YG P P + + VL E+KL+ K +GI RI E QHV L+W +DE F+ L P MR + H+ +ERV VRGL + D L K++ L VF Sbjct: 221 PGDLVRHPRYGVGRFTSIQVS-NDQVSIQEFASISYIDGDVLVPLVQIEMLSPYEGDPEGDNFRIDAVAVVKHLDERKQHRTTSRARRQVRTDIRQHIVSMFDMYAQRASFMRPPHTGNAKLERHFEKQFPYTVTDDQAAAIKDILSDMSERAIPMDRLLCGDVGFGKTEVAMRAIFRALCSGYQVGLLAPTTILAHQHYKTLVARLQ-HYPQFRVGRMTRFVKALEQEETVEAIRTGDIQVLVGTHSVIGSRVEFKKLGLLVVDEEHRFGVNQKEKLRSLHRGIDVLTLSATPIPRTLHISMSGLRDVSVIRTPPSSRKAVITKIVTNEVSQVLRHAIQLELNRQGQLFYVVPRIHAMADAEKRLLDLFPDLRIIKAHAELRDLEDRVLDFACGAADVLLCTTIIENGIDLPQVNTIIIDHATQFGLAQLHQLRGRVGRSDQQAYAYLLSENVQA--QTIGYERISALAEMSELGSGFALANKDMELRGVGNIMGVEQSGRLGGLEPEEYTSILFEELEIARSMKLSRFARSTSSRPELRDAFPPVKYTQVNVPVSAYVPSEYVGGNMDKKLMVYAALANCSSMEELEYAKQFLAKKYGPAP-PEMEMLYVLTEVKLYGKTLGINRIYPEMQHVVLEWGIDESHFQTLTKEFRKTPSMRRKFVHVPSDERVQVRGLALVQNDQILLKLKEWLSVF 911
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A7S2ZE07_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZE07_9RHOD) HSP 1 Score: 490 bits (1261), Expect = 1.020e-161 Identity = 254/531 (47.83%), Postives = 356/531 (67.04%), Query Frame = 0 Query: 260 MDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGN-NSVEAAEYAQMLAEELE-----HIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGT-LPAPTIRHISVLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVF 783 MDRLLCGDVGFGKTEVA RAAFR I+ GKQVA+L PTTILA QHY ER ++ Q I L+RF+ ++ L + DGS + +GTH LL + V F LGLLI+DEEHRFGV QKE+IR +++ +D LSLSATPIPRTLHL++ GLRD S++ PE R PI T + +G G VRRAI E+ RGGQVF+VV + I + A W++ LFP RV++AHG+ D+E R+ FA GK D+LVCTTIIE GI+MP VNTIV+++ GLAQLHQLRGRVGR Q +AW LY GS + +RL+ LE+Y+ LG+GF++AQKD+E+RG+G+VLGVEQ G ++E A++A+MLAEE+ +R PLP + E+FLPV S IP D+V + ++ Y L+ A + L + +R+ +GT +P ++ I+++E+K++ K +GI +I +++ H+ +DW + + L +F+ DE R R ++ +RG+G+ +GD Q+AK+R L++F Sbjct: 1 MDRLLCGDVGFGKTEVAFRAAFRMILHGKQVAILCPTTILATQHYLKALERFKSVLEQVRIGSLSRFIRSKERLATIAGLSDGSVNFVIGTHALLSEGVKFSNLGLLIIDEEHRFGVGQKEQIRSQHRTIDILSLSATPIPRTLHLSMNGLRDVSVITTPPENRLPIITKLGPKGNGTVRRAIGFELARGGQVFYVVRHISKIKNIALWIKDLFPDRRVIIAHGECKDLERRINAFAEGKADILVCTTIIETGIDMPQVNTIVIDEPALLGLAQLHQLRGRVGRGELQGYAWLLYEGSR----NTVNERLRILEQYSGLGAGFEVAQKDLELRGMGSVLGVEQSGKATTMEPADFARMLAEEISLAKQPELRVLPPLPEVA----VTEIFLPVDSHIPRDYVTDDHLRLEVYFQLANADNEDDLQELTERIGKLWGTPMPLKMVQFINLIEMKIYGKSLGISKIVADKPHILMDWDVAARTLQFLTSFLVDERDRDRFSIDSENGQITLRGMGLLAGDAQVAKLRSWLQIF 523
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A4P5VC66_9CYAN (Transcription-repair-coupling factor n=1 Tax=Cyanobium sp. TaxID=2164130 RepID=A0A4P5VC66_9CYAN) HSP 1 Score: 481 bits (1239), Expect = 5.970e-154 Identity = 288/677 (42.54%), Postives = 404/677 (59.68%), Query Frame = 0 Query: 160 LNPGCLVVHSQHGIGRFLGLERTVGSQGATQEYAVVSYRDG-------------------EFMTRCLRVVGCA---------------------------QVNRSPFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSD--VEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAV-QRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGNNSVEAAE-YAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLY---LEERVLVRGLGMCSGDVQLAKIRGLLKVF 783 + PG VVH HGIG+FL LE+ + G +++Y VV Y DG E R+ G A Q FP D ++ S P+ T DQ A+ ++ DM + PMDRL+CGDVGFGKTEVA+RA F+A+ AGKQVA+LAPTT+LA QH+ + ER A YP ++ L RF + + +G+G+ V VGTH LLG SF +LGLL+VDEE RFGVNQKEKI+ KDVD L+LSATPIPRTL+++L+G+R+ SL+ P R+PI T + VR AI E+ RGGQ+F+VVPRV+GI+ AE LRQ+ P LR+LVAHGQM++ +E + F +G+ D+++CTTI+E+G+++P VNTI++ DA RFGLAQL+QLRGRVGRS QA AW Y G A SEA QRL+ ++++ +LGSG+Q+A +DME+RGVG +LGVEQ G + Y +ML E L I+ D +P E ++ LP+++ IP D++ + D+K+ AY A + S + L+ +A RYG +PAP + ++ELKL AK G RI E+ +++L+ ++E AF+ LL + + RL +VL RGLG+ + Q+ ++ G LK Sbjct: 198 MRPGDFVVHRNHGIGKFLKLEK-LAIGGESRDYLVVQYADGLLRVAADQLGSLGRYRATSEQAPELNRMGGTAWSKAKERARKAVRKVALDLVKLYAERHQAAGFAFPPDGPWQIELEDSFPYEPTPDQLKAIGEVKRDME-QPQPMDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVAMLAPTTVLAQQHWRSLSERF-APYP-IKVSLLNRFRTAGERKAIQDGLGEGTVDVVVGTHQLLGKGTSFKQLGLLVVDEEQRFGVNQKEKIKALRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLTALDEEAVRSAIRQELDRGGQIFYVVPRVEGIEEVAEGLRQMIPGLRLLVAHGQMAEGELESAMVAFNAGEADLMLCTTIVESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRSGIQAHAWLFYPGDA--SLSEAARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMEAIGFDLYMEMLQESLAEIQGQD-----IPAVEDTQIDLPITAFIPGDWIADNDEKIAAYRAAADCSSPEGLVQLAADWVDRYGAIPAPVTSLLQLMELKLLAKRCGFSRIKPEKPNIALETPMEEPAFR-LLRQGLPQHLHGRLVFQAGAGSTAKVLARGLGVLPMEKQVEELMGWLKAM 862
BLAST of Gchil9378.t1 vs. uniprot
Match: UPI00187F75E1 (transcription-repair coupling factor n=1 Tax=Nostoc edaphicum TaxID=264686 RepID=UPI00187F75E1) HSP 1 Score: 476 bits (1226), Expect = 3.360e-153 Identity = 287/668 (42.96%), Postives = 396/668 (59.28%), Query Frame = 0 Query: 160 LNPGCLVVHSQHGIGRFLGLER-TVGSQGATQEYAVVSYRDG-------------------EFMTRCLRVVGCAQVNRS---------------------------PFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQM--SDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGN-NSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASE-RQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKI 776 L PG VVH HG+G+F+ LE T+ + T++Y VV Y DG + R+ G A N FP D + S P++ T DQ AV+ + DM S PMDRL+CGDVGFGKTEVA+RA F+A+ AGKQVALLAPTTIL QHY T KER A YP ++ L RF + + + ++ + G V VGTH +LG VSF +LGLL+VDEE RFGVNQKEKI+ VD L+LSATPIPRTL+++L+G+R+ SL+ P R+PI T + + +R AI E+ RGGQVF+VVPRVDGI+ T LR++ P R +AHGQM S++E + F++G D+LVCTTIIE+G+++P VNTI++ DA RFGLAQL+QLRGRVGR+ QA AW Y + A QRL+ ++++ +LGSG+Q+A +DME+RGVG +LG EQ G +++ Y +ML E + IR + +P E ++ L +++ IP D++ + DQKM+AY A++ A+S L IA RYGTLP + + V+ELK AK++G RI E +QHV L+ ++E A+ L A + D + +Y +V VRGLG+ D QL + Sbjct: 124 LRPGDYVVHRNHGVGKFVKLESLTINDE--TRDYLVVQYADGLLRVAADQVGALSRFRAGGDKAPELNRMTGKAWENTKNKVRKAIKKLAVDLLKLYAARSQQQGFSFPGDMPWQEELEDSFPYQPTTDQLKAVQDVKRDMES-DRPMDRLVCGDVGFGKTEVAIRAVFKAVTAGKQVALLAPTTILTQQHYHTLKERF-APYPV-NVGLLNRFRSAEERRDIQKRLATGELDVVVGTHQILGKGVSFKDLGLLVVDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPTRRPIKTHLSPINSESIRTAIRQELDRGGQVFYVVPRVDGIEETTANLREVIPGARFAIAHGQMDESELESTMLTFSNGDADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYPKQR-ALSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDAIGFDLYMEMLEEAIREIRGQE-----IPKVEDTQIDLNLTAFIPADYITDLDQKMSAYRAVATAKSKSELKQIAAEWSDRYGTLPVSANQLLRVMELKQLAKKLGFSRIKPEQKQHVVLETPMEEPAWNLLAANLPDN---LKTRFVYSPGKVTVRGLGVFKADQQLQNL 777
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A8J7AKC5_DESMC (Transcription-repair coupling factor n=1 Tax=Desmonostoc muscorum LEGE 12446 TaxID=1828758 RepID=A0A8J7AKC5_DESMC) HSP 1 Score: 477 bits (1227), Expect = 5.310e-153 Identity = 287/668 (42.96%), Postives = 397/668 (59.43%), Query Frame = 0 Query: 160 LNPGCLVVHSQHGIGRFLGLER-TVGSQGATQEYAVVSYRDG-------------------EFMTRCLRVVGCAQVNRS---------------------------PFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQM--SDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGN-NSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASE-RQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKI 776 L PG VVH HG+G+F+ LE T+ ++ T++Y VV Y DG + ++ G A N FP D + S P++ T DQ AV+ + DM S PMDRL+CGDVGFGKTEVA+RA F+A+ AGKQVALLAPTTIL QHY T KER A YP ++ L RF + + + ++ + G V VGTH LLG VSF +LGLL+VDEE RFGVNQKEKI+ VD L+LSATPIPRTL+++L+G+R+ SL+ P R+PI T + VR AI E+ RGGQ+F+VVPRV+GI+ T LR++ P R +AHGQM S++E + F++G D+LVCTTIIE+G+++P VNTI++ DA RFGLAQL+QLRGRVGR+ QA AW Y + A QRL+ ++++ +LGSG+Q+A +DME+RGVG +LG EQ G +++ Y +ML E + IR + +P + ++ L +++ IP D++ + DQKM+AY A++ A+S L IA RYGTLP P + + V+ELK AK+IG RI E +QHV L+ ++E A+ L A + D + +Y +V VRGLG+ D QL + Sbjct: 152 LRPGDYVVHRNHGVGKFVKLESLTINNE--TRDYLVVQYADGLLRVAADQLGALSRFRAGGDKAPELNKMTGKAWENTKNRVRKAIKKLAVDLLKLYAARSQQQGFSFPNDMPWQEELEDSFPYQPTTDQLKAVQDVKRDMES-DRPMDRLVCGDVGFGKTEVAIRAVFKAVTAGKQVALLAPTTILTQQHYHTLKERF-APYPV-NVGLLNRFRSAEERRDIQKRLATGELDVVVGTHQLLGKGVSFKDLGLLVVDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPTRRPIKTHLAPLNPESVRTAIRQELDRGGQIFYVVPRVEGIEETTASLREMIPGGRFAIAHGQMDESELESTMLTFSNGDADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYHKQR-TLSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDAIGFDLYMEMLEEAIREIRGQE-----IPQVDDTQIDLNLTAFIPADYITDLDQKMSAYRAVATAKSKSELKQIAAEWSDRYGTLPVPANQLLRVMELKQLAKKIGFSRIKPENKQHVVLETPMEEPAWNLLAANLPDN---LKTRFVYSPGKVTVRGLGVFKADQQLQSL 805
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A3S0XGR2_CHLFR (Transcription-repair-coupling factor n=1 Tax=Chlorogloeopsis fritschii PCC 6912 TaxID=211165 RepID=A0A3S0XGR2_CHLFR) HSP 1 Score: 486 bits (1250), Expect = 1.680e-152 Identity = 291/665 (43.76%), Postives = 403/665 (60.60%), Query Frame = 0 Query: 160 LNPGCLVVHSQHGIGRFLGLER-TVGSQGATQEYAVVSYRDG-------------EFMTRCLR------VVGCAQVNRS---------------------------PFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQM--SDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGNNSVEAAE-YAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASE-RQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQL 773 L PG VVH HG+G+FL LE T+ + T+EY VV Y DG F T + + G A N FP D + S P++ T DQ AV+ + DM S PMDRL+CGDVGFGKTEVA+RA F+A+ AGKQVALLAPTTIL QHY T KER A YP ++ L RF ++ E ++ + G + VGTH LLG V+F ELGLL+VDEE RFGVNQKEKI+ +D L+LSATPIPRTL+++L+G+R+ SL+ P R+PI T + + +R AI E+ RGGQ+F+VVPRV+GI+ TA LR++ P R+ +AHGQM S++E + F+SG+ D+LVCTTIIE+G+++P VNTI++ DA RFGLAQL+QLRGRVGR+ QA AW Y + A QRL+ ++++ +LGSG+Q+A +DME+RGVG +LG EQ G V + Y +ML E + IR + +P + ++ L +++ IP D++P+ DQK++AY A++AA+S + L IA RYG +P P + + V+ELK K++G RI E +QHV L+ ++E A+ LLA E +++R +Y +V VRGLG+ D QL Sbjct: 506 LRPGDFVVHRNHGVGKFLKLESLTINHE--TREYLVVQYADGLLRVAADQVGALSRFRTTTQKPPELNKMTGKAWENTKNKVRRAIKKLAVDLLKLYAARSQQKGFAFPTDMPWQQELEDSFPYQPTTDQLKAVQDVKRDMES-DRPMDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERF-APYP-INVGLLNRFRTPQERREIQKRLATGELDIVVGTHQLLGKEVTFKELGLLVVDEEQRFGVNQKEKIKTLKTQIDVLTLSATPIPRTLYMSLSGIREMSLITTPPPSRRPIKTHLAAMNSESIRSAIRQEIDRGGQIFYVVPRVEGIEETAGSLREMIPGARIAIAHGQMDESELEATMLSFSSGEADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYPKQR-TLSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDVIGFDLYMEMLEEAIREIRGQE-----IPKVDDTQIDLNLTAFIPADYIPDIDQKVSAYRAVAAAKSKEELKQIAAEWSDRYGAVPTPANQLLRVIELKQLGKKLGFSRIKPEAKQHVVLETPMEEPAWN-LLAANLPENLKSRF--VYSPGKVTVRGLGVFKADQQL 1156
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A846FCQ3_9CYAN (Transcription-repair-coupling factor n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FCQ3_9CYAN) HSP 1 Score: 475 bits (1222), Expect = 2.940e-152 Identity = 281/667 (42.13%), Postives = 395/667 (59.22%), Query Frame = 0 Query: 160 LNPGCLVVHSQHGIGRFLGLERTVGSQGATQEYAVVSYRDGEFMTRCLRVVGCAQVNRSP----------------------------------------------FPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQM--SDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGN-NSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASE-RQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKI 776 L PG VVH HGIG+FL LE +Q T+EY V+ Y DG ++ ++ S +P+D + S P++ T DQ AV+ + DM S PMDRL+CGDVGFGKTEVA+RA F+A+ A KQVALLAPTTIL QHY T KER A YP + L RF + + +Q + G V VGTH LLG V F +LGLL+VDEE RFGVNQKEKI+ VD L+LSATPIPRTL+++L+G+R+ SL+ P R+PI + + + P+R AI E+ RGGQ+F+VVPRV+GI+ A LR++ P +R+ +AHGQM ++E + F++G+ D+LVCTTIIE+G+++P VNTI++ DA RFGL+QL+QLRGRVGR+ QA AW Y + +A QRL+ ++++ +LGSG+Q+A +DME+RGVG +LGVEQ G +++ Y +ML E + IR + +P + +V L +++ IP D++P+ DQKM+AY A+++AQS + L IA RYG +P + I VLELK AK++G I E +QHV L+ ++E A+ L + P +Y+ +V VRGLG+ QL + Sbjct: 152 LRPGDFVVHRNHGIGKFLKLESLTINQ-ETREYLVLKYADGLLRVSADQLGSLSRFRASADKRPELNKMSGKTWEKTKSRVRKAIQKVAVDLLKLYAQRSQQEGHAYPVDTPWQQELEDSFPYQPTPDQLKAVQDVKRDMES-DRPMDRLVCGDVGFGKTEVALRAIFKAVTADKQVALLAPTTILTQQHYHTLKERF-APYP-IQVGLLNRFRTAEERRDIQQRLLTGELDVVVGTHQLLGKKVGFKDLGLLVVDEEQRFGVNQKEKIKALKTQVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPSRRPIKSHLAAYDSEPIRTAIRQELDRGGQIFYVVPRVEGIEEIASKLREMVPGVRLAIAHGQMPEGELESTMLAFSNGEADILVCTTIIESGLDIPRVNTILIEDAQRFGLSQLYQLRGRVGRAGIQAHAWLFYPRQS-QLTDKARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMDAIGFDLYMEMLEEAIAEIRGQE-----IPKVDETQVDLNLTAFIPADYIPDLDQKMSAYRAVASAQSKQELTQIAADWNDRYGPIPVAAQQLIRVLELKQIAKQLGFAHIKPEGKQHVVLETPMEEPAWNLLKGNL---PEHLHSRFVYMSGKVTVRGLGVLKPHQQLENL 805 The following BLAST results are available for this feature:
BLAST of Gchil9378.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil9378.t1 ID=Gchil9378.t1|Name=Gchil9378.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=816bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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