Gchil9378.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9378.t1
Unique NameGchil9378.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length816
Homology
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A2V3IV42_9FLOR (Transcription-repair-coupling factor n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV42_9FLOR)

HSP 1 Score: 922 bits (2382), Expect = 0.000e+0
Identity = 461/712 (64.75%), Postives = 551/712 (77.39%), Query Frame = 0
Query:  160 LNPGCLVVHSQHGIGRFLGLERTVGSQGATQEYAVVSYRDGEF--------MTRCLRVVGCAQVNR---------------------------------------------------SPFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGNNSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVFCKAAKKWQRRGSPKESDAKKRDLVESLYD 812
            L    LV+H++HGIGRF+GLER   + GA QEYAVVSYRDGE         M R L     AQV R                                                    PFP+D+ AE  F  +CPF LT+DQ++AV+Q+L D+S R  PMDRLLCGDVGFGKTEVA+RAAFRA+ AGKQVA+LAPTTILAHQHYETFK+R   HYPQY I C+TRF+ +R + +AR A+  G C +A+GTHMLL D++SF  +GLLIVDEEHRFGVNQKEKIR RY  +DTL LSATPIPRTLHL L GLRD S+LREAPEGRKPIAT V  +GAG VRRAIS E+ RGGQ+FFVVPR+DGID+TA+WLR +FP LR+LVAHGQ S +E R+W F +GKYD+LVCTTIIENGINMP VNTI+V+DATRFGLAQLHQLRGRVGRS RQA+AWFLYS S+GG+  +AVQRL+TLE++NELGSGF+IAQKDMEMRGVGTVLGVEQHGN+SVEA EYA+MLAEELEHIRTG P+PL+LP+++ VEVFLPVSSLIPE+FVP+ D+KM AY+ALSAA++ K L+ +A +++ARYGTLP  TIRHISVLELK+FAKE+GIRR+ SERQHV L+WAL+E AFK+L+AF+ D+  R+RLEHL LEERV+VRGLG+CSGDVQL K+R LLK   KAAK W RRG   E+D++   L+++LYD
Sbjct:    4 LRQDALVLHARHGIGRFIGLERANSAAGAPQEYAVVSYRDGELYVPLSQLEMLRTLSTDDAAQVRRLDNMQPDLLQRRRKARSSKARYLARRRARDHIRRQLVNLHHLYASRHHVTRHPFPVDQHAEQLFFDACPFTLTNDQHLAVQQVLSDLSDRHIPMDRLLCGDVGFGKTEVAIRAAFRALSAGKQVAVLAPTTILAHQHYETFKQRFLPHYPQYHIACMTRFMPKRTITDARAAVEQGVCRIAIGTHMLLSDTISFAHIGLLIVDEEHRFGVNQKEKIRSRYHGIDTLFLSATPIPRTLHLTLNGLRDASILREAPEGRKPIATYVYPKGAGVVRRAISAEISRGGQIFFVVPRIDGIDTTADWLRDMFPNLRILVAHGQTSGLEQRIWHFVTGKYDMLVCTTIIENGINMPHVNTIIVHDATRFGLAQLHQLRGRVGRSDRQAYAWFLYSESSGGRCMQAVQRLRTLEQFNELGSGFRIAQKDMEMRGVGTVLGVEQHGNHSVEATEYARMLAEELEHIRTGQPIPLSLPVTDTVEVFLPVSSLIPEEFVPDVDEKMAAYTALSAAKTGKELLYVANKMRARYGTLPGSTIRHISVLELKMFAKELGIRRVVSERQHVILEWALEEEAFKSLMAFIEDKQARSRLEHLVLEERVVVRGLGICSGDVQLGKLRSLLKGLTKAAKSWPRRGGDGENDSQSHKLIDALYD 715          
BLAST of Gchil9378.t1 vs. uniprot
Match: R7Q730_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q730_CHOCR)

HSP 1 Score: 723 bits (1866), Expect = 7.600e-247
Identity = 362/598 (60.54%), Postives = 451/598 (75.42%), Query Frame = 0
Query:  215 VNRSPFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGNNSVEAAEYAQMLAEELEHIRTGDPLPLTLPIS-EMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVFCKAAKKWQRRGSPKESDAKKRDLVESLY 811
            + R PFP+DE AE  F   C F LT+DQ  A KQI+ DMS    PMDRLLCGDVGFGKTEVA+RAAFR + AGKQVA+LAPTTILA QHY+TF+ R E    + ++ C+TRF +R+  +E R  +  G   VA+GTHMLL D   F +LGLLIVDEEHRFGVNQKEKIR RY+ +D L +SATPIPRTLHL L+GLRD S+LR  P GRKP+ T V   GAG VR AI+ E+ RGGQVFFVVPR++GI++ A+W+R LFP L+VLVAHG ++D+EHR+W FA  +YDVLVCTTIIENGINMPDVNTI+V DA +FGLAQLHQLRGRVGRS  QA+A+ LY+ S   +A   + RL+ LE+Y++LG+GF IAQ+DMEMRGVGT+LGVEQHGNNS+E  EYA ML+EELEH RTG P+P+ +P      EV+LP++SLIP D++ +FDQKMTAY  LS A S K++ ++ K L++RYG LP  T RH+SV+ELKL  K +GI RI +ERQHV L+W +DE AF  L+AF+ D+  R R EH   EERV++RGLG+CSGDVQLAK+R  L  F KAA    R+    + D    +LV++L+
Sbjct:  362 IERPPFPVDEEAEQRFNLECGFVLTEDQEAATKQIMRDMSKNRRPMDRLLCGDVGFGKTEVAVRAAFRVLAAGKQVAILAPTTILAQQHYDTFRSRFEGASVKIAMACMTRFTSRKINIENRDRVCSGEVRVAIGTHMLLNDKCIFPDLGLLIVDEEHRFGVNQKEKIRARYRGIDALFMSATPIPRTLHLTLSGLRDASVLRTPPPGRKPVITKVSPSGAGIVRAAITREVERGGQVFFVVPRIEGIEALADWVRDLFPGLKVLVAHGSINDLEHRIWAFAQKEYDVLVCTTIIENGINMPDVNTIIVQDAGKFGLAQLHQLRGRVGRSDVQAYAFLLYASSGACQAVHTLDRLRALERYSDLGAGFAIAQRDMEMRGVGTILGVEQHGNNSIEGEEYAMMLSEELEHARTGKPIPVAMPNPVTSTEVYLPIASLIPADYITDFDQKMTAYGQLSRALSMKAVNSVVKGLESRYGPLPTSTRRHVSVMELKLSGKPLGITRIFAERQHVILEWPIDEPAFNCLVAFLPDKQSRDRCEHKVDEERVIIRGLGICSGDVQLAKLRVYLNCFNKAASGLLRQSDRYQPDPT--ELVDTLH 957          
BLAST of Gchil9378.t1 vs. uniprot
Match: UPI001E1D48A5 (transcription-repair-coupling factor-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D48A5)

HSP 1 Score: 662 bits (1708), Expect = 1.220e-228
Identity = 329/539 (61.04%), Postives = 415/539 (76.99%), Query Frame = 0
Query:  252 DMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLE---AHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGNNSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVFCKAA 787
            D+S ++ PMDRLLCGDVGFGKTEVA+R AFR ++  +QVA+LAPTTILA QHYE F+ R E   AH+P   + CLTRF +R+ +LEARQ I  G   + VGTHMLLG++  F  LGLLIVDEEHRFGVNQKEK+R ++KDVDTL LSATPIPRTLHLAL+GLRDTS+L+ APEGRKP+ T V   GAG VRRA+++E+ R GQ+F+VVPR++GID+TA W+  L P  RVLVAHG   D+E R+  FASG++DVLVCT+IIENGINMP VNT+++ DA RFG+AQLHQLRGRVGR   QA+AW LYS   GG +  A +RL  L +++ LG+GF IAQ+DMEMRGVGTVLGVEQHGN+S++A EY++ML EELE  RTG P+ L+LP SE  E++LPV+S IP +++P+ D+KM AY  LS ++S K L      L+ RYG  PAP  RHI ++ LKL AK +GIR+I  +RQHV LDWA+DE + K L+AF+ D+  R R E +  EERVL+RGLG+CSGD+QLAK+   L +F K+A
Sbjct:    3 DISEKSRPMDRLLCGDVGFGKTEVALRCAFRVLLGDRQVAILAPTTILAQQHYEVFRSRFEELSAHFP---VACLTRFGSRKALLEARQQIASGEVRIIVGTHMLLGETTKFHNLGLLIVDEEHRFGVNQKEKLRCKHKDVDTLFLSATPIPRTLHLALSGLRDTSILKTAPEGRKPVVTKVAAAGAGLVRRALTLELDRAGQIFYVVPRIEGIDATASWVSGLCPNARVLVAHGSHKDLERRILAFASGQFDVLVCTSIIENGINMPRVNTMIIQDAARFGMAQLHQLRGRVGRCEVQAYAWLLYSNRPGGDSLSARERLDALARFSGLGAGFAIAQRDMEMRGVGTVLGVEQHGNSSMDAEEYSKMLIEELESARTGIPVQLSLPTSETCEIYLPVASYIPPEYIPSLDEKMVAYGILSGSKSIKELNEAGFDLERRYGPFPAPLQRHICIMRLKLLAKSLGIRKILVQRQHVVLDWAIDEPSLKRLVAFLKDKRARTRFEVVEDEERVLIRGLGICSGDLQLAKLLQWLDIFGKSA 538          
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A5J4Z1B2_PORPP (Transcription-repair-coupling factor n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1B2_PORPP)

HSP 1 Score: 506 bits (1303), Expect = 9.750e-163
Identity = 300/696 (43.10%), Postives = 406/696 (58.33%), Query Frame = 0
Query:  162 PGCLVVHSQHGIGRFLGLERTVGSQGATQEYAVVSYRDGEFM-----------------------------------------TRCLRVVGC----------------AQVNRSPFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPV-RRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGN-NSVEAAEYAQMLAEELEHIRT------------GDPLPLTLPISEMVEVFLPVSSLIPEDFVP-NFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVL-ELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEP-MRARLEHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVF 783
            PG LV H ++G+GRF  ++ +   Q + QE+A +SY DG+ +                                         +R  R V                  A   R P   + + E  F +  P+ +TDDQ  A+K IL DMS R  PMDRLLCGDVGFGKTEVAMRA FRA+ +G QV LLAPTTILAHQHY+T   RL+ HYPQ+ +  +TRFV   +  E  +AI  G   V VGTH ++G  V F +LGLL+VDEEHRFGVNQKEK+R  ++ +D L+LSATPIPRTLH++++GLRD S++R  P  RK + T +       V R AI +E+ R GQ+F+VVPR+  +    + L  LFP LR++ AH ++ D+E RV DFA G  DVL+CTTIIENGI++P VNTI+++ AT+FGLAQLHQLRGRVGRS +QA+A+ L         +   +R+  L + +ELGSGF +A KDME+RGVG ++GVEQ G    +E  EY  +L EELE  R+               L    P  +  +V +PVS+ +P ++V  N D+K+  Y+AL+   S + L    + L  +YG  P P +  + VL E+KL+ K +GI RI  E QHV L+W +DE  F+ L       P MR +  H+  +ERV VRGL +   D  L K++  L VF
Sbjct:  221 PGDLVRHPRYGVGRFTSIQVS-NDQVSIQEFASISYIDGDVLVPLVQIEMLSPYEGDPEGDNFRIDAVAVVKHLDERKQHRTTSRARRQVRTDIRQHIVSMFDMYAQRASFMRPPHTGNAKLERHFEKQFPYTVTDDQAAAIKDILSDMSERAIPMDRLLCGDVGFGKTEVAMRAIFRALCSGYQVGLLAPTTILAHQHYKTLVARLQ-HYPQFRVGRMTRFVKALEQEETVEAIRTGDIQVLVGTHSVIGSRVEFKKLGLLVVDEEHRFGVNQKEKLRSLHRGIDVLTLSATPIPRTLHISMSGLRDVSVIRTPPSSRKAVITKIVTNEVSQVLRHAIQLELNRQGQLFYVVPRIHAMADAEKRLLDLFPDLRIIKAHAELRDLEDRVLDFACGAADVLLCTTIIENGIDLPQVNTIIIDHATQFGLAQLHQLRGRVGRSDQQAYAYLLSENVQA--QTIGYERISALAEMSELGSGFALANKDMELRGVGNIMGVEQSGRLGGLEPEEYTSILFEELEIARSMKLSRFARSTSSRPELRDAFPPVKYTQVNVPVSAYVPSEYVGGNMDKKLMVYAALANCSSMEELEYAKQFLAKKYGPAP-PEMEMLYVLTEVKLYGKTLGINRIYPEMQHVVLEWGIDESHFQTLTKEFRKTPSMRRKFVHVPSDERVQVRGLALVQNDQILLKLKEWLSVF 911          
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A7S2ZE07_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZE07_9RHOD)

HSP 1 Score: 490 bits (1261), Expect = 1.020e-161
Identity = 254/531 (47.83%), Postives = 356/531 (67.04%), Query Frame = 0
Query:  260 MDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGN-NSVEAAEYAQMLAEELE-----HIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGT-LPAPTIRHISVLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVF 783
            MDRLLCGDVGFGKTEVA RAAFR I+ GKQVA+L PTTILA QHY    ER ++   Q  I  L+RF+  ++ L     + DGS +  +GTH LL + V F  LGLLI+DEEHRFGV QKE+IR +++ +D LSLSATPIPRTLHL++ GLRD S++   PE R PI T +  +G G VRRAI  E+ RGGQVF+VV  +  I + A W++ LFP  RV++AHG+  D+E R+  FA GK D+LVCTTIIE GI+MP VNTIV+++    GLAQLHQLRGRVGR   Q +AW LY GS     +   +RL+ LE+Y+ LG+GF++AQKD+E+RG+G+VLGVEQ G   ++E A++A+MLAEE+       +R   PLP       + E+FLPV S IP D+V +   ++  Y  L+ A +   L  + +R+   +GT +P   ++ I+++E+K++ K +GI +I +++ H+ +DW +     + L +F+ DE  R R        ++ +RG+G+ +GD Q+AK+R  L++F
Sbjct:    1 MDRLLCGDVGFGKTEVAFRAAFRMILHGKQVAILCPTTILATQHYLKALERFKSVLEQVRIGSLSRFIRSKERLATIAGLSDGSVNFVIGTHALLSEGVKFSNLGLLIIDEEHRFGVGQKEQIRSQHRTIDILSLSATPIPRTLHLSMNGLRDVSVITTPPENRLPIITKLGPKGNGTVRRAIGFELARGGQVFYVVRHISKIKNIALWIKDLFPDRRVIIAHGECKDLERRINAFAEGKADILVCTTIIETGIDMPQVNTIVIDEPALLGLAQLHQLRGRVGRGELQGYAWLLYEGSR----NTVNERLRILEQYSGLGAGFEVAQKDLELRGMGSVLGVEQSGKATTMEPADFARMLAEEISLAKQPELRVLPPLPEVA----VTEIFLPVDSHIPRDYVTDDHLRLEVYFQLANADNEDDLQELTERIGKLWGTPMPLKMVQFINLIEMKIYGKSLGISKIVADKPHILMDWDVAARTLQFLTSFLVDERDRDRFSIDSENGQITLRGMGLLAGDAQVAKLRSWLQIF 523          
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A4P5VC66_9CYAN (Transcription-repair-coupling factor n=1 Tax=Cyanobium sp. TaxID=2164130 RepID=A0A4P5VC66_9CYAN)

HSP 1 Score: 481 bits (1239), Expect = 5.970e-154
Identity = 288/677 (42.54%), Postives = 404/677 (59.68%), Query Frame = 0
Query:  160 LNPGCLVVHSQHGIGRFLGLERTVGSQGATQEYAVVSYRDG-------------------EFMTRCLRVVGCA---------------------------QVNRSPFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSD--VEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAV-QRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGNNSVEAAE-YAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLY---LEERVLVRGLGMCSGDVQLAKIRGLLKVF 783
            + PG  VVH  HGIG+FL LE+ +   G +++Y VV Y DG                   E      R+ G A                           Q     FP D   ++    S P+  T DQ  A+ ++  DM  +  PMDRL+CGDVGFGKTEVA+RA F+A+ AGKQVA+LAPTT+LA QH+ +  ER  A YP   ++ L RF    +    +  +G+G+  V VGTH LLG   SF +LGLL+VDEE RFGVNQKEKI+   KDVD L+LSATPIPRTL+++L+G+R+ SL+   P  R+PI T +       VR AI  E+ RGGQ+F+VVPRV+GI+  AE LRQ+ P LR+LVAHGQM++  +E  +  F +G+ D+++CTTI+E+G+++P VNTI++ DA RFGLAQL+QLRGRVGRS  QA AW  Y G A    SEA  QRL+ ++++ +LGSG+Q+A +DME+RGVG +LGVEQ G       + Y +ML E L  I+  D     +P  E  ++ LP+++ IP D++ + D+K+ AY A +   S + L+ +A     RYG +PAP    + ++ELKL AK  G  RI  E+ +++L+  ++E AF+ LL     + +  RL          +VL RGLG+   + Q+ ++ G LK  
Sbjct:  198 MRPGDFVVHRNHGIGKFLKLEK-LAIGGESRDYLVVQYADGLLRVAADQLGSLGRYRATSEQAPELNRMGGTAWSKAKERARKAVRKVALDLVKLYAERHQAAGFAFPPDGPWQIELEDSFPYEPTPDQLKAIGEVKRDME-QPQPMDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVAMLAPTTVLAQQHWRSLSERF-APYP-IKVSLLNRFRTAGERKAIQDGLGEGTVDVVVGTHQLLGKGTSFKQLGLLVVDEEQRFGVNQKEKIKALRKDVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPLRRPIKTHLTALDEEAVRSAIRQELDRGGQIFYVVPRVEGIEEVAEGLRQMIPGLRLLVAHGQMAEGELESAMVAFNAGEADLMLCTTIVESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRSGIQAHAWLFYPGDA--SLSEAARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMEAIGFDLYMEMLQESLAEIQGQD-----IPAVEDTQIDLPITAFIPGDWIADNDEKIAAYRAAADCSSPEGLVQLAADWVDRYGAIPAPVTSLLQLMELKLLAKRCGFSRIKPEKPNIALETPMEEPAFR-LLRQGLPQHLHGRLVFQAGAGSTAKVLARGLGVLPMEKQVEELMGWLKAM 862          
BLAST of Gchil9378.t1 vs. uniprot
Match: UPI00187F75E1 (transcription-repair coupling factor n=1 Tax=Nostoc edaphicum TaxID=264686 RepID=UPI00187F75E1)

HSP 1 Score: 476 bits (1226), Expect = 3.360e-153
Identity = 287/668 (42.96%), Postives = 396/668 (59.28%), Query Frame = 0
Query:  160 LNPGCLVVHSQHGIGRFLGLER-TVGSQGATQEYAVVSYRDG-------------------EFMTRCLRVVGCAQVNRS---------------------------PFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQM--SDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGN-NSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASE-RQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKI 776
            L PG  VVH  HG+G+F+ LE  T+  +  T++Y VV Y DG                   +      R+ G A  N                              FP D   +     S P++ T DQ  AV+ +  DM S   PMDRL+CGDVGFGKTEVA+RA F+A+ AGKQVALLAPTTIL  QHY T KER  A YP  ++  L RF +  +  + ++ +  G   V VGTH +LG  VSF +LGLL+VDEE RFGVNQKEKI+     VD L+LSATPIPRTL+++L+G+R+ SL+   P  R+PI T +    +  +R AI  E+ RGGQVF+VVPRVDGI+ T   LR++ P  R  +AHGQM  S++E  +  F++G  D+LVCTTIIE+G+++P VNTI++ DA RFGLAQL+QLRGRVGR+  QA AW  Y       +  A QRL+ ++++ +LGSG+Q+A +DME+RGVG +LG EQ G  +++    Y +ML E +  IR  +     +P  E  ++ L +++ IP D++ + DQKM+AY A++ A+S   L  IA     RYGTLP    + + V+ELK  AK++G  RI  E +QHV L+  ++E A+  L A + D     +   +Y   +V VRGLG+   D QL  +
Sbjct:  124 LRPGDYVVHRNHGVGKFVKLESLTINDE--TRDYLVVQYADGLLRVAADQVGALSRFRAGGDKAPELNRMTGKAWENTKNKVRKAIKKLAVDLLKLYAARSQQQGFSFPGDMPWQEELEDSFPYQPTTDQLKAVQDVKRDMES-DRPMDRLVCGDVGFGKTEVAIRAVFKAVTAGKQVALLAPTTILTQQHYHTLKERF-APYPV-NVGLLNRFRSAEERRDIQKRLATGELDVVVGTHQILGKGVSFKDLGLLVVDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPTRRPIKTHLSPINSESIRTAIRQELDRGGQVFYVVPRVDGIEETTANLREVIPGARFAIAHGQMDESELESTMLTFSNGDADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYPKQR-ALSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDAIGFDLYMEMLEEAIREIRGQE-----IPKVEDTQIDLNLTAFIPADYITDLDQKMSAYRAVATAKSKSELKQIAAEWSDRYGTLPVSANQLLRVMELKQLAKKLGFSRIKPEQKQHVVLETPMEEPAWNLLAANLPDN---LKTRFVYSPGKVTVRGLGVFKADQQLQNL 777          
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A8J7AKC5_DESMC (Transcription-repair coupling factor n=1 Tax=Desmonostoc muscorum LEGE 12446 TaxID=1828758 RepID=A0A8J7AKC5_DESMC)

HSP 1 Score: 477 bits (1227), Expect = 5.310e-153
Identity = 287/668 (42.96%), Postives = 397/668 (59.43%), Query Frame = 0
Query:  160 LNPGCLVVHSQHGIGRFLGLER-TVGSQGATQEYAVVSYRDG-------------------EFMTRCLRVVGCAQVNRS---------------------------PFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQM--SDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGN-NSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASE-RQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKI 776
            L PG  VVH  HG+G+F+ LE  T+ ++  T++Y VV Y DG                   +      ++ G A  N                              FP D   +     S P++ T DQ  AV+ +  DM S   PMDRL+CGDVGFGKTEVA+RA F+A+ AGKQVALLAPTTIL  QHY T KER  A YP  ++  L RF +  +  + ++ +  G   V VGTH LLG  VSF +LGLL+VDEE RFGVNQKEKI+     VD L+LSATPIPRTL+++L+G+R+ SL+   P  R+PI T +       VR AI  E+ RGGQ+F+VVPRV+GI+ T   LR++ P  R  +AHGQM  S++E  +  F++G  D+LVCTTIIE+G+++P VNTI++ DA RFGLAQL+QLRGRVGR+  QA AW  Y       +  A QRL+ ++++ +LGSG+Q+A +DME+RGVG +LG EQ G  +++    Y +ML E +  IR  +     +P  +  ++ L +++ IP D++ + DQKM+AY A++ A+S   L  IA     RYGTLP P  + + V+ELK  AK+IG  RI  E +QHV L+  ++E A+  L A + D     +   +Y   +V VRGLG+   D QL  +
Sbjct:  152 LRPGDYVVHRNHGVGKFVKLESLTINNE--TRDYLVVQYADGLLRVAADQLGALSRFRAGGDKAPELNKMTGKAWENTKNRVRKAIKKLAVDLLKLYAARSQQQGFSFPNDMPWQEELEDSFPYQPTTDQLKAVQDVKRDMES-DRPMDRLVCGDVGFGKTEVAIRAVFKAVTAGKQVALLAPTTILTQQHYHTLKERF-APYPV-NVGLLNRFRSAEERRDIQKRLATGELDVVVGTHQLLGKGVSFKDLGLLVVDEEQRFGVNQKEKIKSLKTQVDVLTLSATPIPRTLYMSLSGIREMSLITTPPPTRRPIKTHLAPLNPESVRTAIRQELDRGGQIFYVVPRVEGIEETTASLREMIPGGRFAIAHGQMDESELESTMLTFSNGDADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYHKQR-TLSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDAIGFDLYMEMLEEAIREIRGQE-----IPQVDDTQIDLNLTAFIPADYITDLDQKMSAYRAVATAKSKSELKQIAAEWSDRYGTLPVPANQLLRVMELKQLAKKIGFSRIKPENKQHVVLETPMEEPAWNLLAANLPDN---LKTRFVYSPGKVTVRGLGVFKADQQLQSL 805          
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A3S0XGR2_CHLFR (Transcription-repair-coupling factor n=1 Tax=Chlorogloeopsis fritschii PCC 6912 TaxID=211165 RepID=A0A3S0XGR2_CHLFR)

HSP 1 Score: 486 bits (1250), Expect = 1.680e-152
Identity = 291/665 (43.76%), Postives = 403/665 (60.60%), Query Frame = 0
Query:  160 LNPGCLVVHSQHGIGRFLGLER-TVGSQGATQEYAVVSYRDG-------------EFMTRCLR------VVGCAQVNRS---------------------------PFPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQM--SDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGNNSVEAAE-YAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASE-RQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQL 773
            L PG  VVH  HG+G+FL LE  T+  +  T+EY VV Y DG              F T   +      + G A  N                              FP D   +     S P++ T DQ  AV+ +  DM S   PMDRL+CGDVGFGKTEVA+RA F+A+ AGKQVALLAPTTIL  QHY T KER  A YP  ++  L RF   ++  E ++ +  G   + VGTH LLG  V+F ELGLL+VDEE RFGVNQKEKI+     +D L+LSATPIPRTL+++L+G+R+ SL+   P  R+PI T +    +  +R AI  E+ RGGQ+F+VVPRV+GI+ TA  LR++ P  R+ +AHGQM  S++E  +  F+SG+ D+LVCTTIIE+G+++P VNTI++ DA RFGLAQL+QLRGRVGR+  QA AW  Y       +  A QRL+ ++++ +LGSG+Q+A +DME+RGVG +LG EQ G   V   + Y +ML E +  IR  +     +P  +  ++ L +++ IP D++P+ DQK++AY A++AA+S + L  IA     RYG +P P  + + V+ELK   K++G  RI  E +QHV L+  ++E A+  LLA    E +++R   +Y   +V VRGLG+   D QL
Sbjct:  506 LRPGDFVVHRNHGVGKFLKLESLTINHE--TREYLVVQYADGLLRVAADQVGALSRFRTTTQKPPELNKMTGKAWENTKNKVRRAIKKLAVDLLKLYAARSQQKGFAFPTDMPWQQELEDSFPYQPTTDQLKAVQDVKRDMES-DRPMDRLVCGDVGFGKTEVAIRAIFKAVTAGKQVALLAPTTILTQQHYHTLKERF-APYP-INVGLLNRFRTPQERREIQKRLATGELDIVVGTHQLLGKEVTFKELGLLVVDEEQRFGVNQKEKIKTLKTQIDVLTLSATPIPRTLYMSLSGIREMSLITTPPPSRRPIKTHLAAMNSESIRSAIRQEIDRGGQIFYVVPRVEGIEETAGSLREMIPGARIAIAHGQMDESELEATMLSFSSGEADILVCTTIIESGLDIPRVNTILIEDAHRFGLAQLYQLRGRVGRAGIQAHAWLFYPKQR-TLSDAARQRLRAIQEFTQLGSGYQLAMRDMEIRGVGNLLGAEQSGQMDVIGFDLYMEMLEEAIREIRGQE-----IPKVDDTQIDLNLTAFIPADYIPDIDQKVSAYRAVAAAKSKEELKQIAAEWSDRYGAVPTPANQLLRVIELKQLGKKLGFSRIKPEAKQHVVLETPMEEPAWN-LLAANLPENLKSRF--VYSPGKVTVRGLGVFKADQQL 1156          
BLAST of Gchil9378.t1 vs. uniprot
Match: A0A846FCQ3_9CYAN (Transcription-repair-coupling factor n=1 Tax=Cyanothece sp. SIO1E1 TaxID=2607788 RepID=A0A846FCQ3_9CYAN)

HSP 1 Score: 475 bits (1222), Expect = 2.940e-152
Identity = 281/667 (42.13%), Postives = 395/667 (59.22%), Query Frame = 0
Query:  160 LNPGCLVVHSQHGIGRFLGLERTVGSQGATQEYAVVSYRDGEFMTRCLRVVGCAQVNRSP----------------------------------------------FPIDERAELTFAQSCPFRLTDDQNVAVKQILHDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILAHQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGTHMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIPRTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGGQVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQM--SDVEHRVWDFASGKYDVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFAWFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGVEQHGN-NSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLIPEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHISVLELKLFAKEIGIRRIASE-RQHVSLDWALDEHAFKALLAFVTDEPMRARLEHLYLEERVLVRGLGMCSGDVQLAKI 776
            L PG  VVH  HGIG+FL LE    +Q  T+EY V+ Y DG       ++   ++   S                                               +P+D   +     S P++ T DQ  AV+ +  DM S   PMDRL+CGDVGFGKTEVA+RA F+A+ A KQVALLAPTTIL  QHY T KER  A YP   +  L RF    +  + +Q +  G   V VGTH LLG  V F +LGLL+VDEE RFGVNQKEKI+     VD L+LSATPIPRTL+++L+G+R+ SL+   P  R+PI + +    + P+R AI  E+ RGGQ+F+VVPRV+GI+  A  LR++ P +R+ +AHGQM   ++E  +  F++G+ D+LVCTTIIE+G+++P VNTI++ DA RFGL+QL+QLRGRVGR+  QA AW  Y   +     +A QRL+ ++++ +LGSG+Q+A +DME+RGVG +LGVEQ G  +++    Y +ML E +  IR  +     +P  +  +V L +++ IP D++P+ DQKM+AY A+++AQS + L  IA     RYG +P    + I VLELK  AK++G   I  E +QHV L+  ++E A+  L   +   P       +Y+  +V VRGLG+     QL  +
Sbjct:  152 LRPGDFVVHRNHGIGKFLKLESLTINQ-ETREYLVLKYADGLLRVSADQLGSLSRFRASADKRPELNKMSGKTWEKTKSRVRKAIQKVAVDLLKLYAQRSQQEGHAYPVDTPWQQELEDSFPYQPTPDQLKAVQDVKRDMES-DRPMDRLVCGDVGFGKTEVALRAIFKAVTADKQVALLAPTTILTQQHYHTLKERF-APYP-IQVGLLNRFRTAEERRDIQQRLLTGELDVVVGTHQLLGKKVGFKDLGLLVVDEEQRFGVNQKEKIKALKTQVDVLTLSATPIPRTLYMSLSGVREMSLITTPPPSRRPIKSHLAAYDSEPIRTAIRQELDRGGQIFYVVPRVEGIEEIASKLREMVPGVRLAIAHGQMPEGELESTMLAFSNGEADILVCTTIIESGLDIPRVNTILIEDAQRFGLSQLYQLRGRVGRAGIQAHAWLFYPRQS-QLTDKARQRLRAIQEFAQLGSGYQLAMRDMEIRGVGNLLGVEQSGQMDAIGFDLYMEMLEEAIAEIRGQE-----IPKVDETQVDLNLTAFIPADYIPDLDQKMSAYRAVASAQSKQELTQIAADWNDRYGPIPVAAQQLIRVLELKQIAKQLGFAHIKPEGKQHVVLETPMEEPAWNLLKGNL---PEHLHSRFVYMSGKVTVRGLGVLKPHQQLENL 805          
The following BLAST results are available for this feature:
BLAST of Gchil9378.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IV42_9FLOR0.000e+064.75Transcription-repair-coupling factor n=1 Tax=Graci... [more]
R7Q730_CHOCR7.600e-24760.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1D48A51.220e-22861.04transcription-repair-coupling factor-like n=1 Tax=... [more]
A0A5J4Z1B2_PORPP9.750e-16343.10Transcription-repair-coupling factor n=1 Tax=Porph... [more]
A0A7S2ZE07_9RHOD1.020e-16147.83Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A4P5VC66_9CYAN5.970e-15442.54Transcription-repair-coupling factor n=1 Tax=Cyano... [more]
UPI00187F75E13.360e-15342.96transcription-repair coupling factor n=1 Tax=Nosto... [more]
A0A8J7AKC5_DESMC5.310e-15342.96Transcription-repair coupling factor n=1 Tax=Desmo... [more]
A0A3S0XGR2_CHLFR1.680e-15243.76Transcription-repair-coupling factor n=1 Tax=Chlor... [more]
A0A846FCQ3_9CYAN2.940e-15242.13Transcription-repair-coupling factor n=1 Tax=Cyano... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 463..545
e-value: 9.8E-18
score: 74.9
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 446..544
e-value: 3.0E-15
score: 56.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 437..590
score: 13.795333
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 234..427
e-value: 1.7E-28
score: 110.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 253..416
score: 22.354546
IPR005118Transcription-repair-coupling factor, C-terminal domainSMARTSM00982TRCF_a_2_acoord: 643..739
e-value: 4.5E-9
score: 46.2
IPR005118Transcription-repair-coupling factor, C-terminal domainPFAMPF03461TRCFcoord: 644..728
e-value: 4.7E-15
score: 55.7
IPR003711CarD-like/TRCF domainPFAMPF02559CarD_CdnL_TRCFcoord: 160..200
e-value: 3.8E-6
score: 27.5
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 239..401
e-value: 1.6E-15
score: 57.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 428..592
e-value: 4.5E-41
score: 142.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 203..417
e-value: 1.5E-70
score: 239.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 287..555
NoneNo IPR availableGENE3D2.40.10.170coord: 160..202
e-value: 1.8E-10
score: 42.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..82
NoneNo IPR availablePANTHERPTHR14025FANCONI ANEMIA GROUP M FANCM FAMILY MEMBERcoord: 214..726
coord: 149..201
NoneNo IPR availablePANTHERPTHR14025:SF29TRANSCRIPTION-REPAIR-COUPLING FACTORcoord: 214..726
coord: 149..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..815
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
IPR037235TRCF-like, C-terminal D7 domaiGENE3D3.90.1150.50coord: 640..780
e-value: 4.9E-19
score: 71.1
IPR037235TRCF-like, C-terminal D7 domaiSUPERFAMILY143517TRCF domain-likecoord: 639..783
IPR036101CarD-like/TRCF domain superfamilySUPERFAMILY141259CarD-likecoord: 156..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3499556..3502180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9378.t1Gchil9378.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3499556..3502180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9378.t1 ID=Gchil9378.t1|Name=Gchil9378.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=816bp
MQIALAACASAATVARPPTPPPMAFISAVFRAAPRACAQPLFAPRENPAP
QRSLSPQQRRLHAKRAERPSHPTNDADDQRRLQLAAETLSADDIAGIIGA
SHSSQTPLPNDLLPSAKPTEGTPPPTVAPVTVEPSALDTKPSPVSSPRSS
TLPPPDIFCLNPGCLVVHSQHGIGRFLGLERTVGSQGATQEYAVVSYRDG
EFMTRCLRVVGCAQVNRSPFPIDERAELTFAQSCPFRLTDDQNVAVKQIL
HDMSSRTTPMDRLLCGDVGFGKTEVAMRAAFRAIIAGKQVALLAPTTILA
HQHYETFKERLEAHYPQYSITCLTRFVARRKVLEARQAIGDGSCHVAVGT
HMLLGDSVSFLELGLLIVDEEHRFGVNQKEKIRERYKDVDTLSLSATPIP
RTLHLALTGLRDTSLLREAPEGRKPIATCVCQRGAGPVRRAISVEMRRGG
QVFFVVPRVDGIDSTAEWLRQLFPTLRVLVAHGQMSDVEHRVWDFASGKY
DVLVCTTIIENGINMPDVNTIVVNDATRFGLAQLHQLRGRVGRSHRQAFA
WFLYSGSAGGKASEAVQRLKTLEKYNELGSGFQIAQKDMEMRGVGTVLGV
EQHGNNSVEAAEYAQMLAEELEHIRTGDPLPLTLPISEMVEVFLPVSSLI
PEDFVPNFDQKMTAYSALSAAQSSKSLIAIAKRLQARYGTLPAPTIRHIS
VLELKLFAKEIGIRRIASERQHVSLDWALDEHAFKALLAFVTDEPMRARL
EHLYLEERVLVRGLGMCSGDVQLAKIRGLLKVFCKAAKKWQRRGSPKESD
AKKRDLVESLYDSFK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR005118TRCF_C
IPR003711CarD-like/TRCF_domain
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR037235TRCF-like_C_D7
IPR036101CarD-like/TRCF_dom_sf