Gchil9374.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9374.t1
Unique NameGchil9374.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length483
Homology
The following BLAST results are available for this feature:
BLAST of Gchil9374.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 415..438
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..482
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3458788..3460236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9374.t1Gchil9374.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3458788..3460236 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9374.t1 ID=Gchil9374.t1|Name=Gchil9374.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=483bp
MPVAHSLSARLFPSFAVLLQSRPEPSLTCPRLAQSKSISDTFPHFAGSSS
LDSWSSEAAGQYINMAEQSSFGTVRPRVPSLPFVDRDSFSVRTVPQTLVS
NMDSPLLSPYAQEQYALLEQVLRKDDTNGPNSSSITKVERTQDPIGSPFI
GPEFYYFSDIMADAPSVSNNMLQASLKTTERLYANEADVSKVSIADAPID
LRSLDSAAAATDLSSGLESLCASNEPEPTTCAEQQQQNLLGVFNDRKTNE
RDDEHPVHSEAIGQFRSIFPFNSNPVSRSVFEPERETGNEEVEMKADEDE
TDDMLFSAKNEDSCEVRDQSPSSNISMTGPSIGSHPDLYENLSPFHQALV
DALGRKIATMSRRKLRETLAERVTIEEVEPLMIINRDELAGMLGLGVTTW
KMFVHNSLGVPRWPARALKSQKVKENKLLQRLKEAEARGDHENLTRLRKE
HSRVIQNHMKRRKLFRAEAKQRSEKNAVRKKR*
back to top