Gchil9370.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil9370.t1
Unique Name	Gchil9370.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	505

Homology

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BLAST of Gchil9370.t1 vs. uniprot
Match: A0A2V3IV28_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV28_9FLOR)

HSP 1 Score: 365 bits (938), Expect = 2.750e-118
Identity = 193/428 (45.09%), Postives = 283/428 (66.12%), Query Frame = 0

Query:   20 FGCVAAHNQVAVSGIIVNPYYSRGINGTVESLAADLSENVYAACFDPENDKQSSAFLVKLDAQLHVIWTKKYETLPLTSPTIAFSDAMGLFTIVPIEDFETNSIQIWIYEIDVEDGSTVQAILVDSVESITAAGLKAFVAISEQKRPTVYISYVEKRAMQRGTVTKVFKFEKMDSSVLLEKWKYKIYNASQVVVSHDIAEHFSGGGMYIAQISRKPTTTITDSAMITMIDKNGSVLRTGSFPTMTGNAKISCFDSDQSGSMYLSESPSYLHHIALISLNGSHRITKLWSNSTLHVAAMHVLQNGSSLFVLATSKDIRNLNGSTVPL----FAVYNYSGVALFSKKHDENIRGVYRDLKTFTMRNEAISPAIVLGGYFRLARNDGSFGGAQISLGTYIFPISAFRVPNDTAAFPGSPPQITNPAVETTD 443
            F   +AH    +  +IVN + S  + GT+  L A   + VY A FDP++ ++SS  L+KLD  LH++W KK+E +P +  TIAFS  MGL+ ++PI+  E N ++IW+ EID  DG+T+Q +LVD VES   + +KAFVA  E + P++YISYVE R  ++ T+T V K +K+D  VL+E W+  +YNAS+ VVS++I E  S G + +AQISR P++  TD   IT I  NG++  T   PT +GNAKIS   +D SG MY +E+P+++H ++++SLNG+HRI+K+WS     V ++HVL+NGS L+VL+ ++ +RN NG+ VP     F+VY+ +G  L  KKHD+ I GV R +  F M NEAISP +VLGGY+RL  ++G    A+++LGTYI+PIS   VP + +A     P+ + P  ET +
Sbjct:   13 FTSASAHATAQIPDVIVNAFLSTPLYGTINDLQAGHHQQVYVAGFDPDDAERSSVVLLKLDHLLHIVWRKKFEAVPASRLTIAFSKTMGLYVVLPIKSIEENVVEIWVLEIDPIDGNTLQTMLVDKVESYEESSMKAFVATGETEWPSIYISYVELRGQRKETITTVVKVQKLDLGVLVEAWRVDLYNASRSVVSNEIDEDISEGRILVAQISRHPSSDSTDWNSITTISTNGTLFHTYFLPTASGNAKISSLATDASGLMYFAEAPTHIHQLSILSLNGTHRISKVWSQPAKDVLSVHVLRNGSLLYVLSKTEGVRNDNGTLVPASIPEFSVYSETGSVLMKKKHDDTIPGVERHIHLFHMFNEAISPKVVLGGYYRLLNSEGP-ERAELALGTYIYPISV--VPEEQSA---ETPEPSLPKKETIE 434

The following BLAST results are available for this feature:

BLAST of Gchil9370.t1 vs. uniprot

BLAST of Gchil9370.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IV28_9FLOR	2.750e-118	45.09	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 451..472
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..25
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..450
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 473..504
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..22 score: 5.0
None	No IPR available	TMHMM	TMhelix		coord: 450..472
None	No IPR available	TMHMM	TMhelix		coord: 13..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004370_pilon	contig	tig00004370_pilon:3428139..3429653 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil9370.t1	Gchil9370.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004370_pilon 3428139..3429653 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil9370.t1 ID=Gchil9370.t1|Name=Gchil9370.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=505bp
MLNRMQDTTTLALLVMLSIFGCVAAHNQVAVSGIIVNPYYSRGINGTVES
LAADLSENVYAACFDPENDKQSSAFLVKLDAQLHVIWTKKYETLPLTSPT
IAFSDAMGLFTIVPIEDFETNSIQIWIYEIDVEDGSTVQAILVDSVESIT
AAGLKAFVAISEQKRPTVYISYVEKRAMQRGTVTKVFKFEKMDSSVLLEK
WKYKIYNASQVVVSHDIAEHFSGGGMYIAQISRKPTTTITDSAMITMIDK
NGSVLRTGSFPTMTGNAKISCFDSDQSGSMYLSESPSYLHHIALISLNGS
HRITKLWSNSTLHVAAMHVLQNGSSLFVLATSKDIRNLNGSTVPLFAVYN
YSGVALFSKKHDENIRGVYRDLKTFTMRNEAISPAIVLGGYFRLARNDGS
FGGAQISLGTYIFPISAFRVPNDTAAFPGSPPQITNPAVETTDIRNRQRT
LIIGTISGIAVVVVMAGILSCLRRNGFTLGLKLSPSPRNETSTGGSLGQR
SVLW*