Gchil9364.t2 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9364.t2
Unique NameGchil9364.t2
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length941
Homology
BLAST of Gchil9364.t2 vs. uniprot
Match: A0A2V3IEJ9_9FLOR (Tonsoku-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEJ9_9FLOR)

HSP 1 Score: 1111 bits (2873), Expect = 0.000e+0
Identity = 606/945 (64.13%), Postives = 732/945 (77.46%), Query Frame = 0
Query:    1 MQRYDIAQLQRQLENLEDHNDSEAQKLYNNLGLAYLQARRYRHALNAHRLEKAACKRLVDTNPNNFQHRLDLAIAYRRCGDVILKLDRLVDAHDNLITDKAEVIRAAHKQHRQALQIARAIENPSASLERQAASAAIAQSALALAMETKRVSAFTHAAQCCIHAAKLIECIDPCIGSALSVDRNVMTHGLAVNFSIALSGMGEKKKAKIMLNAVVLNAKRVNDMPNFLRAMANLAEEAGEEDDWRMCQFYSRQWVQMARQAGDEPDESDALRKLAVALRETQDYRGAKQALERAILIAATRDAADEARRFLAVVEQEMIEYEQMHRQLATAQRNAAESETESNFIEEARHRLTAGNLAFTLKKWKLAAELLKRYFLLVDEFGCNTAVTDIPSPVHNSAVANVAEAMWKMNKYEQAVKWASRELAVFDGDDAGQAQAWCNLGVYLDDFGNKQKAIDALQKSMFFAEKAADKGIFKRAQINLELIYEEMKKARASVKPHPLFEEKQTEVDIYSIFN-NRNEDLGKAPALGNFDAMSSAYQTVCHTSETHTLVHD-VPSRKGEKSVMVLSTQPATAIPHRMRVCDESSRHFSDNRRQRHQKDRCSSIGSKNCSGNHSHXXXH---GGTILADRRSFGFKGVTDLVTEYKKICGARQSPTTRVQERIVRALRALSSALIARDACDEHSEVPLGLNLSRMFLSNADISTVFETLSKCGEDFPVHLNLSFNPTVTSSAYDCLKLRSYVSPSNLHCLKEINLSCSGLSGHALRILADALSETGSLSSVKNVNVSKNALGRQSKATAFAMARLLLNAFRVELFDVSNNLLPNSFMEHLVNSLRLMRKNPQTEKMFSPVKKLSFVLNNRCCPTAFLELDDPQATVACFSELFKFLPQLEMVDVRACGASGTLRKLLKGVNIDNNVFPRQILTVSEEIIDEADDSNLILNDCGMK 940
            MQRYDIAQLQRQL+NLEDHNDSEAQKLYNNLGLA+LQARRYRHALNAHR EKAACKRLV+ NP+N  HRLDLAIAYRRCGDVILKLDRL+DA  NLITDKA+VIRAAH QHR AL+IAR I++P A +ERQAASAA+AQSALALA+ETK + AF HAAQCCI AA+LI+CI       +  D+N MTHGLAVNF+IALSGMGE KKA  ML+AV LNAKRVNDM NF+RA++NLAEEA +E DW MCQFYS+QWV MARQA DE DESDALRKLAVALRE  D+RGAKQAL+RAILIAAT+DAADEARRFL VVEQE  ++E+M R+LA AQR+A E+E ++NF+EEA+  LTAGN AF LKKWKLA ELL+RYF+LVDEFGCNTAVTD+P PVHN+AVANVAEAMWKMNKYE+AVKWASRELAVF+GDDAGQAQAWCNLGVYLDDFG K KA+DAL++SMFFAEKA D+ IF RAQ NLEL+ EE++K  A+  P    +  Q+ V +    N +   + G  P + +    S+   +V   S +H   ++   S  GEKSVM++STQP+  I  R      +S+  S  R +    D  SS  +KN   + +    H   G T+ ADR S GFK V D+V+EYKKIC  RQ   + +Q RIV AL++LSSALIARDACDE S +P  LNLSRM L++ D+S +FE LSK GED+ VHLNLSFNPTVTS+AYDCL  RSY SP NLHC+KE+NLSCSGLSG+ALRILADALS+TGSLS V  VNVSKNALGRQ K TAFA+ARLLLNA +V+  D++ NLLPN+FM+ L+++L+ +  + Q +   SP++K+SF LNNRC PTA L+++     V  F  LF  LP LE+VDVRACGAS TLR++L+ ++   +   R +++VS+ I D++D    +L+D G+K
Sbjct:    1 MQRYDIAQLQRQLDNLEDHNDSEAQKLYNNLGLAHLQARRYRHALNAHRREKAACKRLVNANPHNLNHRLDLAIAYRRCGDVILKLDRLIDADRNLITDKADVIRAAHVQHRHALKIARVIDSPYARVERQAASAALAQSALALALETKSIPAFRHAAQCCIRAARLIDCIRNEDIRVVDPDKNDMTHGLAVNFAIALSGMGEMKKANTMLHAVALNAKRVNDMQNFVRALSNLAEEASDEQDWNMCQFYSQQWVHMARQARDEADESDALRKLAVALRENHDFRGAKQALQRAILIAATKDAADEARRFLDVVEQETDQFERMQRELAAAQRSAVEAEQDANFVEEAKCTLTAGNHAFALKKWKLAVELLQRYFVLVDEFGCNTAVTDVPYPVHNTAVANVAEAMWKMNKYEEAVKWASRELAVFEGDDAGQAQAWCNLGVYLDDFGKKHKAMDALKQSMFFAEKAGDQEIFNRAQTNLELVEEELQKTNAN--PPSTSQAPQSHVFVIDPENQDTTANSGPIPQVASTLNPSTILSSVNVASSSHAPGNNGATSNGGEKSVMMVSTQPSVGISKRTNGFTATSQDVSLPRTRSFHADFRSSAATKNSYEDANRSRSHPSRGATVTADRSSIGFKKVVDVVSEYKKICTGRQHGLSHLQPRIVTALQSLSSALIARDACDETSMIPAVLNLSRMLLNDNDVSIIFEILSKIGEDYAVHLNLSFNPTVTSTAYDCLNPRSYFSPCNLHCVKELNLSCSGLSGNALRILADALSKTGSLSCVTIVNVSKNALGRQWKVTAFAVARLLLNASKVQELDLALNLLPNTFMKELLDNLQRLNTSSQ-QGTDSPIRKVSFNLNNRCFPTAMLDMEYADDAVRVFKSLFTILPGLEVVDVRACGASRTLRRMLRELSTLQDRCSRTVVSVSDLIEDDSDPLRPMLDDWGIK 942          
The following BLAST results are available for this feature:
BLAST of Gchil9364.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEJ9_9FLOR0.000e+064.13Tonsoku-like protein n=1 Tax=Gracilariopsis chorda... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
NoneNo IPR availableCOILSCoilCoilcoord: 314..348
NoneNo IPR availablePANTHERPTHR10098RAPSYN-RELATEDcoord: 20..490
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 685..895
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 434..467
e-value: 0.2
score: 20.7
coord: 25..65
e-value: 370.0
score: 1.2
coord: 268..301
e-value: 11.0
score: 14.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..123
e-value: 3.5E-5
score: 25.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 389..539
e-value: 2.3E-11
score: 45.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 176..379
e-value: 1.6E-6
score: 29.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 148..315
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 344..490
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 640..926
e-value: 5.8E-10
score: 39.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3348502..3351324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9364.t2Gchil9364.t2Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3348502..3351324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9364.t2 ID=Gchil9364.t2|Name=Gchil9364.t2|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=941bp
MQRYDIAQLQRQLENLEDHNDSEAQKLYNNLGLAYLQARRYRHALNAHRL
EKAACKRLVDTNPNNFQHRLDLAIAYRRCGDVILKLDRLVDAHDNLITDK
AEVIRAAHKQHRQALQIARAIENPSASLERQAASAAIAQSALALAMETKR
VSAFTHAAQCCIHAAKLIECIDPCIGSALSVDRNVMTHGLAVNFSIALSG
MGEKKKAKIMLNAVVLNAKRVNDMPNFLRAMANLAEEAGEEDDWRMCQFY
SRQWVQMARQAGDEPDESDALRKLAVALRETQDYRGAKQALERAILIAAT
RDAADEARRFLAVVEQEMIEYEQMHRQLATAQRNAAESETESNFIEEARH
RLTAGNLAFTLKKWKLAAELLKRYFLLVDEFGCNTAVTDIPSPVHNSAVA
NVAEAMWKMNKYEQAVKWASRELAVFDGDDAGQAQAWCNLGVYLDDFGNK
QKAIDALQKSMFFAEKAADKGIFKRAQINLELIYEEMKKARASVKPHPLF
EEKQTEVDIYSIFNNRNEDLGKAPALGNFDAMSSAYQTVCHTSETHTLVH
DVPSRKGEKSVMVLSTQPATAIPHRMRVCDESSRHFSDNRRQRHQKDRCS
SIGSKNCSGNHSHSHSHGGTILADRRSFGFKGVTDLVTEYKKICGARQSP
TTRVQERIVRALRALSSALIARDACDEHSEVPLGLNLSRMFLSNADISTV
FETLSKCGEDFPVHLNLSFNPTVTSSAYDCLKLRSYVSPSNLHCLKEINL
SCSGLSGHALRILADALSETGSLSSVKNVNVSKNALGRQSKATAFAMARL
LLNAFRVELFDVSNNLLPNSFMEHLVNSLRLMRKNPQTEKMFSPVKKLSF
VLNNRCCPTAFLELDDPQATVACFSELFKFLPQLEMVDVRACGASGTLRK
LLKGVNIDNNVFPRQILTVSEEIIDEADDSNLILNDCGMK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR032675LRR_dom_sf