Gchil9364.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9364.t1
Unique NameGchil9364.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length318
Homology
[Close]
BLAST of Gchil9364.t1 vs. uniprot
Match: A0A2V3IEJ9_9FLOR (Tonsoku-like protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEJ9_9FLOR)

HSP 1 Score: 469 bits (1208), Expect = 3.500e-156
Identity = 246/311 (79.10%), Postives = 273/311 (87.78%), Query Frame = 0 
Query:    1 MQRYDIAQLQRQLENLEDHNDSEAQKLYNNLGLAYLQARRYRHALNAHRLEKAACKRLVDTNPNNFQHRLDLAIAYRRCGDVILKLDRLVDAHDNLITDKAEVIRAAHKQHRQALQIARAIENPSASLERQAASAAIAQSALALAMETKRVSAFTHAAQCCIHAAKLIECIDPCIGSALSVDRNVMTHGLAVNFSIALSGMGEKKKAKIMLNAVVLNAKRVNDMPNFLRAMANLAEEAGEEDDWRMCQFYSRQWVQMARQAGDEPDESDALRKLAVALRETQDYRGAKQALERAILIAATRDAADEARRFL 311
            MQRYDIAQLQRQL+NLEDHNDSEAQKLYNNLGLA+LQARRYRHALNAHR EKAACKRLV+ NP+N  HRLDLAIAYRRCGDVILKLDRL+DA  NLITDKA+VIRAAH QHR AL+IAR I++P A +ERQAASAA+AQSALALA+ETK + AF HAAQCCI AA+LI+CI       +  D+N MTHGLAVNF+IALSGMGE KKA  ML+AV LNAKRVNDM NF+RA++NLAEEA +E DW MCQFYS+QWV MARQA DE DESDALRKLAVALRE  D+RGAKQAL+RAILIAAT+DAADEARRFL
Sbjct:    1 MQRYDIAQLQRQLDNLEDHNDSEAQKLYNNLGLAHLQARRYRHALNAHRREKAACKRLVNANPHNLNHRLDLAIAYRRCGDVILKLDRLIDADRNLITDKADVIRAAHVQHRHALKIARVIDSPYARVERQAASAALAQSALALALETKSIPAFRHAAQCCIRAARLIDCIRNEDIRVVDPDKNDMTHGLAVNFAIALSGMGEMKKANTMLHAVALNAKRVNDMQNFVRALSNLAEEASDEQDWNMCQFYSQQWVHMARQARDEADESDALRKLAVALRENHDFRGAKQALQRAILIAATKDAADEARRFL 311
The following BLAST results are available for this feature:
BLAST of Gchil9364.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IEJ9_9FLOR3.500e-15679.10Tonsoku-like protein n=1 Tax=Gracilariopsis chorda... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 6..26
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 2..123
e-value: 1.3E-5
score: 27.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 178..302
e-value: 2.9E-6
score: 28.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 143..303

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3350268..3351324 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9364.t1Gchil9364.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3350268..3351324 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9364.t1 ID=Gchil9364.t1|Name=Gchil9364.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=318bp
MQRYDIAQLQRQLENLEDHNDSEAQKLYNNLGLAYLQARRYRHALNAHRL
EKAACKRLVDTNPNNFQHRLDLAIAYRRCGDVILKLDRLVDAHDNLITDK
AEVIRAAHKQHRQALQIARAIENPSASLERQAASAAIAQSALALAMETKR
VSAFTHAAQCCIHAAKLIECIDPCIGSALSVDRNVMTHGLAVNFSIALSG
MGEKKKAKIMLNAVVLNAKRVNDMPNFLRAMANLAEEAGEEDDWRMCQFY
SRQWVQMARQAGDEPDESDALRKLAVALRETQDYRGAKQALERAILIAAT
RDAADEARRFLAKQGID*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf