Gchil9356.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9356.t1
Unique NameGchil9356.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length388
Homology
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BLAST of Gchil9356.t1 vs. uniprot
Match: A0A2V3IUC1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUC1_9FLOR)

HSP 1 Score: 381 bits (979), Expect = 9.890e-128
Identity = 183/294 (62.24%), Postives = 237/294 (80.61%), Query Frame = 0 
Query:   47 VKGRLVEMHKSRLPELPSTALITMSDPSFQDCMLQLLQSARKIGWKESIYLLAIEYDQFDQEIRDEIDELGAFVINTRPIFDSWVTEK-FEGQKSYRRLDPKKFRKMEVFLNPVFRTYERLIYIDADGFLTGLEPMVRVAFPDNVAILMRQNDRSFNKLSFHQNELAEEFLSRDQMRTLHNRYPDRAKSGATAYFIVDVNKLPSTLELFSRSIDILCNFRSAFRLNDQTLLNLLFYDELAMFPYCSWDEVVVMEEPQELYRYCLENMQLQRWLLGQISFMYRHMAVEEKNMCVR 339
            VK R+ +     L +  +TALITM+DP FQDC +QLL++AR+I W E IYLLAI+Y+QFDQ +R+EI+ELG FVI+TRPIFDSW++ K    +K YRRL P KFRKMEVFLNP+FRTY+RLI++DADG LT L+PMVRV+FP  +AI+MRQND+SFNK S + NE+   FL++ Q++ L  RYPDRAK+GATAYFIVDV KLP+  ++FS+S+DILCNFR+ FRLNDQTLLNLLFY E+ MFPYCSWDE+ +M++ Q L  YC++++Q Q  L+G+ SF+YRHM+V EK  C+R
Sbjct:   47 VKERVNKGSWPGLRDSGTTALITMADPKFQDCAIQLLRTARRIQWAEPIYLLAIDYEQFDQSLRNEINELGVFVIDTRPIFDSWISNKGVLYRKVYRRLQPNKFRKMEVFLNPIFRTYDRLIFLDADGLLTNLDPMVRVSFPPKIAIMMRQNDKSFNKQSLYGNEMHTRFLTKKQLKLLKERYPDRAKTGATAYFIVDVKKLPTPQDVFSKSLDILCNFRAGFRLNDQTLLNLLFYREMEMFPYCSWDEIALMDDTQRLRDYCVKSIQTQIKLVGKKSFLYRHMSVSEKKECLR 340
The following BLAST results are available for this feature:
BLAST of Gchil9356.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUC1_9FLOR9.890e-12862.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain Acoord: 65..325
e-value: 4.8E-8
score: 34.5
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 70..289
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 32..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..387
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..31
NoneNo IPR availableTMHMMTMhelixcoord: 17..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3239304..3240467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9356.t1Gchil9356.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3239304..3240467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9356.t1 ID=Gchil9356.t1|Name=Gchil9356.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=388bp
MFKPRKKYGNLVRAKSSLALFLFLTVLIAIFNTTIRSMFRIQRDLIVKGR
LVEMHKSRLPELPSTALITMSDPSFQDCMLQLLQSARKIGWKESIYLLAI
EYDQFDQEIRDEIDELGAFVINTRPIFDSWVTEKFEGQKSYRRLDPKKFR
KMEVFLNPVFRTYERLIYIDADGFLTGLEPMVRVAFPDNVAILMRQNDRS
FNKLSFHQNELAEEFLSRDQMRTLHNRYPDRAKSGATAYFIVDVNKLPST
LELFSRSIDILCNFRSAFRLNDQTLLNLLFYDELAMFPYCSWDEVVVMEE
PQELYRYCLENMQLQRWLLGQISFMYRHMAVEEKNMCVRKREKGRKRALN
DTGNGDSIGPSEALHFELSSFSTCHEAAQAWLKRIPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans