Gchil9350.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9350.t1
Unique NameGchil9350.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length353
Homology
BLAST of Gchil9350.t1 vs. uniprot
Match: A0A2V3IEL5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEL5_9FLOR)

HSP 1 Score: 472 bits (1215), Expect = 1.590e-164
Identity = 232/346 (67.05%), Postives = 272/346 (78.61%), Query Frame = 0
Query:    5 LTLKTVFGSPNQSNLPQAEAKIAFHVNVRQSNVAFLRRFLNRIYHKDNLYLVDYSPPLQSDAYADILAKENVHHRTADPFVENGVSEVINILDGMAFFLDREENLGVPGNSFDYYVHCTPDYYPVLNPTHMRKVLSFDPEEYPPPNFVHFFHESQLPFFAGEINRVAFDFSLSFNRTLPHTTELYQMNIVHPDYKKRRMVLPRAVKRFVVNHNFVELATDSILSKRLLLTLGDTSHVDERFFAALVANNKKDIGIVIHTTSLQCVNSIAIDTAVKDSLPDFSPNPITIEFLQRTAEPCLFAGPFANANDVVLTNIDKELLIPPGTQGKPIGLGYHDKVYEILQELI 350
            L L+ +  S N S +P AEA IAFHVNV +SNV  L RFL+R+YH  NLYLVDY+PPL++  Y     ++N+HHR ADPFVENGVSEVINILDGM+FFLDRE+ L     SFDYY+HCTPDYYPV+NPTHMR+VLS+  EEYPPPNF+HFFHESQLP F+ EIN    DF+L+FNR+LP +TEL+ + I+HPD  KR    PRA KR VVNH+FV+LA DS LSKRLL+ LGDTSHVDERFFAALVANN  DIG VI +TSLQCVNS AIDT V+ SLPD+SP PIT+EFL +T+EPCLFAGPF   +  +   IDKE LIPPGTQGKP G+GYHD VYE L+  I
Sbjct:   11 LALQELVESYN-SKVPLAEATIAFHVNVGKSNVDLLSRFLSRVYHAKNLYLVDYAPPLEAKNYEMYFRRDNIHHRGADPFVENGVSEVINILDGMSFFLDREDVLSSGNRSFDYYIHCTPDYYPVVNPTHMRRVLSYAKEEYPPPNFLHFFHESQLPLFSTEINHAYLDFALAFNRSLPLSTELHSLGIIHPDANKRVFRFPRATKRLVVNHDFVKLAVDSALSKRLLMALGDTSHVDERFFAALVANNNLDIGKVIRSTSLQCVNSRAIDTPVEKSLPDYSPKPITVEFLHKTSEPCLFAGPFMKRDTHLFRRIDKEFLIPPGTQGKPDGIGYHDLVYEKLRATI 355          
BLAST of Gchil9350.t1 vs. uniprot
Match: R7QM71_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM71_CHOCR)

HSP 1 Score: 300 bits (769), Expect = 8.700e-97
Identity = 158/347 (45.53%), Postives = 211/347 (60.81%), Query Frame = 0
Query:    7 LKTVFGSPNQSNLPQAEAKIAFHVNVRQSNVAFLRRFLNRIYHKDNLYLVDYSPPLQSDAYADILAKENVHHRTADPFVENGVSEVINILDGMAFFLDREENLGVPGNSFDYYVHCTPDYYPVLNPTHMRKVLSFDPEEYPPPNFVHFFHESQLPFFAGEINRVAFDFSLSFNRTLPHTTELYQMNIVHPDYKKRRMVLPRAVKRFVVNHNFVELATDSILSKRLLLTLGDTSHVDERFFAALVANNKKDIGIVIHTTSLQCVNSIAIDTAVKDSLPDFSPNPITIEFLQRTAEPCLFAGPFAN---ANDVVLTNIDKELLIPPGTQGKPIGLGYHDKVYEILQELI 350
            L  V    N    P + A IAFH++V ++ +  L RF  RIYH  NLYL+ ++  L   A +  +   NVH R+A+P+V +GVSE INILD MA+FLDRE+ L     SFDYY+HCTP+ YP +    MR +L F  +      F HF H SQLP F GE++R+  D+SLSFNR+L     L      HPD+++R   + R  K FV +  +V++A DS+LSK LL++LGD SHV E FF +L A   ++   +I TTSL+C N   +D AVK  LP + P   + +FL RT EPCLF GPF +    N  +   ID ELLI PGTQG+P G  YHD+VY  L+ L+
Sbjct:   18 LLAVLCIANPEQFPSSPATIAFHISVNEAQLPLLERFFFRIYHPSNLYLLTFAHSLDPRAKSARITGRNVHIRSAEPYVPDGVSEAINILDAMAYFLDREDALASDKPSFDYYIHCTPNDYPTVTAERMRTLLGFARDHLDAATFFHFTHTSQLPLFDGELSRIHIDYSLSFNRSLTLEEGLEATKSYHPDHRRRTAEILRTDKHFVAHRRYVKIAADSMLSKHLLMSLGDASHVFEHFFGSLAAAASEENIKLIRTTSLRCTNFNDLDRAVKHILPGYKPRSPSTDFLLRTVEPCLFTGPFPDDGPENLAIRNRIDMELLIAPGTQGRPEGPSYHDRVYGNLKRLV 364          
BLAST of Gchil9350.t1 vs. uniprot
Match: A0A2V3J332_9FLOR (Beta-glucuronosyltransferase GlcAT14B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J332_9FLOR)

HSP 1 Score: 61.6 bits (148), Expect = 1.110e-6
Identity = 61/252 (24.21%), Postives = 113/252 (44.84%), Query Frame = 0
Query:   17 SNLPQAEAKIAFHVNVRQSNVAFLRRFLNRIYHKDNLYLV--DYSPP-------LQSDAYADILAKENVHHRTADPFVENGVSEVINILDGMAFFLDREENLGVPGNSFDYYVHCTPDYYPVLNPTHMRKVLSFDPEEYPPPNFVHFFHESQLPFFAGE----INRVAFDFSLSFNRTLPHTTELYQMNIVHPDYKKRRMVLPRAVKRFVVNHNFVELATDSILSKRLLLTLGDTSHVDERFFAALVANNKK 255
            S+   AEA IAF + +  S V  L R ++RIYH  N+Y +  D   P       ++    A+    +NV    ++     G+S V+N ++ M   L++++        + Y ++ +   YP+++   +R++L    EE    NF+ F   S+   +  +    + ++  D +LSF        +L Q N   P ++  ++    A    + +    + A  S  ++RLLLT   +    E +FA LV N  +
Sbjct:   75 SDPTDAEASIAFFIQISNSTVEHLPRLMSRIYHAQNVYAIHLDRKIPFARRNRVIEQIFRANQPYSKNVFVMHSEAVTYRGISMVLNTINAMNLLLEKDQ-------KWQYMINLSGSDYPLVSAKGLRQLLGPYREEQ--LNFLSF---SRCATWERKRRLRMQKMHVDPALSFRNDGQQVEQLGQEN---PLWRSMKLQYTTAEAWMIASRGLCDFAVRSGFARRLLLTFSLSVEAAEHYFATLVWNQSR 311          
The following BLAST results are available for this feature:
BLAST of Gchil9350.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IEL5_9FLOR1.590e-16467.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QM71_CHOCR8.700e-9745.53Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J332_9FLOR1.110e-624.21Beta-glucuronosyltransferase GlcAT14B n=1 Tax=Grac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 8..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 13..352
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3220557..3221615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9350.t1Gchil9350.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3220557..3221615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9350.t1 ID=Gchil9350.t1|Name=Gchil9350.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=353bp
MLFCLTLKTVFGSPNQSNLPQAEAKIAFHVNVRQSNVAFLRRFLNRIYHK
DNLYLVDYSPPLQSDAYADILAKENVHHRTADPFVENGVSEVINILDGMA
FFLDREENLGVPGNSFDYYVHCTPDYYPVLNPTHMRKVLSFDPEEYPPPN
FVHFFHESQLPFFAGEINRVAFDFSLSFNRTLPHTTELYQMNIVHPDYKK
RRMVLPRAVKRFVVNHNFVELATDSILSKRLLLTLGDTSHVDERFFAALV
ANNKKDIGIVIHTTSLQCVNSIAIDTAVKDSLPDFSPNPITIEFLQRTAE
PCLFAGPFANANDVVLTNIDKELLIPPGTQGKPIGLGYHDKVYEILQELI
KR*
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