Gchil9346.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9346.t1
Unique NameGchil9346.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length179
Homology
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BLAST of Gchil9346.t1 vs. uniprot
Match: A0A2V3IER5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IER5_9FLOR)

HSP 1 Score: 166 bits (421), Expect = 1.370e-49
Identity = 96/181 (53.04%), Postives = 120/181 (66.30%), Query Frame = 0 
Query:    1 MPRLLNFRALCALCERAEAHVWSVSQHRPLCAACATRHNSPSPCDDAQQRVQHDTSVPIAARTVVSALCSACARAPAVLLSVRTGASLCAACAERAEQTLQGEVLPLRDVGAADDMVFDRMDFSAGHSAELVSDGCCAEARV-DVDMSYYQTKVPPALVRHRKRAG--DAHNAASPSQRRR 178
            MPRLLNFRALCA CE+AEA  W V   RPLC+ACA+   +               +VPI +RTVV+ALCS CA APA +L+  +GASLC +C E+  +++Q E++PL D  A  D+VFDRMDFS+ H+A   +  C A A   +VDMSYYQTKVP  LVRHRKRA   D  +  SP+QRRR
Sbjct:    1 MPRLLNFRALCAGCEKAEARSWCVRDRRPLCSACASARGA--------------RAVPIVSRTVVTALCSHCAVAPAAVLAPTSGASLCQSCGEK--RSVQDELVPLNDAAAVQDIVFDRMDFSSVHAARPDAAECAASASARNVDMSYYQTKVPAGLVRHRKRAAERDITSTGSPTQRRR 165
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BLAST of Gchil9346.t1 vs. uniprot
Match: R7QQF6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQF6_CHOCR)

HSP 1 Score: 101 bits (252), Expect = 7.920e-24
Identity = 68/179 (37.99%), Postives = 93/179 (51.96%), Query Frame = 0 
Query:    1 MPRLLNFRALCALCERAEAHVWSVSQHRPLCAACATRH----NSPSPCDDAQQRVQHDTSVPIAARTVVSALCSACARAPAVLLSVRTGASLCAACAER--------AEQTLQGEVLPLRDVGAADDMVFDRMDFSA---GHSAELVSDGCCAEARVD-VDMSYYQTKVPPALVRHRKR 163
            MPRLLN RALC+ CERAEA  W  +    LCA+C  R     +SP P             VPI + +VV+ALC  C  APA + +V     LC  CA R        + +  +  ++PL++  AA  +VFD+MDFS+   G        G   E R   VD+SYY+T+VP ++V  + R
Sbjct:    1 MPRLLNLRALCSSCERAEASHWCGTSSSALCASCLHRRPVSASSPVP-------------VPIQSNSVVAALCGRCDVAPAAVFAVDAATPLCEICAPREHKHHSPNSREKQKRHLVPLKESAAAHGLVFDKMDFSSLYHGQGGRKPKSGLTPEQRAGKVDLSYYKTEVPMSVVSSKSR 166
The following BLAST results are available for this feature:
BLAST of Gchil9346.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IER5_9FLOR1.370e-4953.04Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQF6_CHOCR7.920e-2437.99Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..178
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3214929..3215465 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9346.t1Gchil9346.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3214929..3215465 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9346.t1 ID=Gchil9346.t1|Name=Gchil9346.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=179bp
MPRLLNFRALCALCERAEAHVWSVSQHRPLCAACATRHNSPSPCDDAQQR
VQHDTSVPIAARTVVSALCSACARAPAVLLSVRTGASLCAACAERAEQTL
QGEVLPLRDVGAADDMVFDRMDFSAGHSAELVSDGCCAEARVDVDMSYYQ
TKVPPALVRHRKRAGDAHNAASPSQRRR*
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