Gchil9345.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil9345.t1
Unique Name	Gchil9345.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	488

Homology

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BLAST of Gchil9345.t1 vs. uniprot
Match: A0A2V3IH92_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH92_9FLOR)

HSP 1 Score: 304 bits (779), Expect = 1.290e-95
Identity = 251/498 (50.40%), Postives = 291/498 (58.43%), Query Frame = 0

Query:    4 PPRHALSRARDRVNERVAALRLPELPPRDLERLAAA-QPHSAPLLPA-PYS-APLSLPPPLITPTKFH-PDLLPGNERSPADVRSFSTST-PLLVRGLVSPTRASAPLVLPSLALPSANVTSWPPQPPLSXXXXXXXMLPPVSYAPVSA--PVSAPHVHPPCDARGHPSRAAVTTPSSPVNNTAHMSSNEIKKAQNRKSAKRFREAQKQRWKNMADDLIRQKKTIESLRAQLAAQASSMAHL------PPTCHSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLQLRADRRAVSIHDLVHAPEPQQP-CGTVAAATVTAAPAVDVTGAASTSHMQSEAEASLYAQILSTYSQKKRAQHDGSAQQMARMQADAMMDGAEHSSSDLLSKLPYACDLGVLRCCLVVMSCNARITAIRRGDASACSTFATDGLEADEQGEFRKAMQCGSAISLTYHRAGVKVNAVMNPIGGTDRVIVAEFAPF 487
            PP+ +LSR R    ERVA LRLP+LPPRDLERLAA   PHSAP     P+S A LSLPPPLITPTKF  PD LPGNERSP DVR+FS ST PL+VRGLVSPTRASA LVLPSL+LP AN +   P PP  XXXXXXX      YA  SA  PVSA           +  R + TTPSSPV  +A M+ NEIKKAQNRKSAKRFREAQKQRWKNMADDL+ QK+ I+ LRAQLAAQAS+MAH+      P  CH +A         XXXXXXXXX                                 DRRAVSI++LV++ +     C                    ++SH Q EAEA++YAQILS  SQK    H                           +K+PYA DLGVL  C VV   +ARITA+RRG A+  STFATDGL + +Q   R A++    I + + R G  VNAV+NPI  +   IVAEFAPF
Sbjct:    3 PPKSSLSRGR----ERVAGLRLPQLPPRDLERLAATGAPHSAPANAGLPHSRASLSLPPPLITPTKFAAPDALPGNERSPTDVRTFSASTTPLMVRGLVSPTRASAQLVLPSLSLPHANDSL--PLPPXXXXXXXXXXX----YARHSAMVPVSAAAA---ASVANNLPRQSRTTPSSPVT-SAQMTQNEIKKAQNRKSAKRFREAQKQRWKNMADDLLNQKRIIDDLRAQLAAQASTMAHVSGAAAAPAVCHGAAHHTHAASRAXXXXXXXXXG-------------------------------GDRRAVSINELVNSADASDGGCXXXX---------XXXXXXXNSSHRQCEAEAAMYAQILSNVSQKGGEAH---------------------------TKMPYAADLGVLMACYVVTGADARITAVRRGSAATYSTFATDGLCSADQRMLRNALRSNGVICVRFQRGGAPVNAVINPIAQSHTFIVAEFAPF 419

The following BLAST results are available for this feature:

BLAST of Gchil9345.t1 vs. uniprot

BLAST of Gchil9345.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IH92_9FLOR	1.290e-95	50.40	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 235..298
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..205
None	No IPR available	CDD	cd14686	bZIP	coord: 186..230 e-value: 6.74683E-8 score: 47.1549

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004370_pilon	contig	tig00004370_pilon:3212578..3214041 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil9345.t1	Gchil9345.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004370_pilon 3212578..3214041 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil9345.t1 ID=Gchil9345.t1|Name=Gchil9345.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=488bp
MLPPPRHALSRARDRVNERVAALRLPELPPRDLERLAAAQPHSAPLLPAP
YSAPLSLPPPLITPTKFHPDLLPGNERSPADVRSFSTSTPLLVRGLVSPT
RASAPLVLPSLALPSANVTSWPPQPPLSHHHHHHHMLPPVSYAPVSAPVS
APHVHPPCDARGHPSRAAVTTPSSPVNNTAHMSSNEIKKAQNRKSAKRFR
EAQKQRWKNMADDLIRQKKTIESLRAQLAAQASSMAHLPPTCHSSAHHAL
PHPAPHTSLPTASPPVAAQPTQQQQQQQQQQQQQQQQQQQHLLQLRADRR
AVSIHDLVHAPEPQQPCGTVAAATVTAAPAVDVTGAASTSHMQSEAEASL
YAQILSTYSQKKRAQHDGSAQQMARMQADAMMDGAEHSSSDLLSKLPYAC
DLGVLRCCLVVMSCNARITAIRRGDASACSTFATDGLEADEQGEFRKAMQ
CGSAISLTYHRAGVKVNAVMNPIGGTDRVIVAEFAPF*