Gchil9343.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9343.t1
Unique NameGchil9343.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length99
Homology
BLAST of Gchil9343.t1 vs. uniprot
Match: A0A2V3IEM2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEM2_9FLOR)

HSP 1 Score: 64.3 bits (155), Expect = 3.590e-11
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 0
Query:   43 REDRPAPGFTVYAERLNGRAAMLGFVATVLIELAGGRGIVPLAQQLL 89
            R+DR A GFT YAER+NGRAAMLG VA V IEL  GRG+V L + LL
Sbjct:   70 RDDRRAMGFTTYAERVNGRAAMLGLVAAVAIELVAGRGLVALLEALL 116          
BLAST of Gchil9343.t1 vs. uniprot
Match: UPI0018EFA535 (chlorophyll a/b-binding protein n=2 Tax=Phormidium sp. FACHB-1136 TaxID=2692848 RepID=UPI0018EFA535)

HSP 1 Score: 56.2 bits (134), Expect = 1.140e-8
Identity = 28/38 (73.68%), Postives = 30/38 (78.95%), Query Frame = 0
Query:   45 DRPAPGFTVYAERLNGRAAMLGFVATVLIELAGGRGIV 82
            DRP  GF  YAER+NGRAAMLGFVA VL ELA G+ IV
Sbjct:   12 DRPKSGFNDYAERINGRAAMLGFVALVLFELATGQAIV 49          
BLAST of Gchil9343.t1 vs. uniprot
Match: A0A8J7A9Z9_9CYAN (Uncharacterized protein n=1 Tax=Romeria aff. gracilis LEGE 07310 TaxID=915328 RepID=A0A8J7A9Z9_9CYAN)

HSP 1 Score: 54.3 bits (129), Expect = 6.670e-8
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0
Query:   45 DRPAPGFTVYAERLNGRAAMLGFVATVLIELAGGRGIV 82
            DRP  GFT YAERLNGRAAM+GFVA + IE   GRG++
Sbjct:   13 DRPKTGFTEYAERLNGRAAMVGFVALLAIEYFTGRGLL 50          
BLAST of Gchil9343.t1 vs. uniprot
Match: B4WSG6_SYNS7 (Uncharacterized protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=B4WSG6_SYNS7)

HSP 1 Score: 54.3 bits (129), Expect = 6.670e-8
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 0
Query:   46 RPAPGFTVYAERLNGRAAMLGFVATVLIELAGGRGIVPL 84
            RP  GF  YAE+LNGRAAM+GFVA VLIEL  G+G++ L
Sbjct:   14 RPKKGFNEYAEQLNGRAAMVGFVALVLIELITGKGLLTL 52          
BLAST of Gchil9343.t1 vs. uniprot
Match: A0A7T5E5Q1_9CYAN (Uncharacterized protein n=2 Tax=Leptolyngbya sp. BL0902 TaxID=1115757 RepID=A0A7T5E5Q1_9CYAN)

HSP 1 Score: 54.7 bits (130), Expect = 8.500e-8
Identity = 27/38 (71.05%), Postives = 29/38 (76.32%), Query Frame = 0
Query:   45 DRPAPGFTVYAERLNGRAAMLGFVATVLIELAGGRGIV 82
            DRP  GF  YAER+NGRAAMLGFVA VL EL  G+ IV
Sbjct:   38 DRPKSGFNDYAERINGRAAMLGFVALVLFELVTGQAIV 75          
BLAST of Gchil9343.t1 vs. uniprot
Match: A0A0C1YCV3_9CYAN (CAB/ELIP/HLIP family protein n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1YCV3_9CYAN)

HSP 1 Score: 53.1 bits (126), Expect = 1.900e-7
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   46 RPAPGFTVYAERLNGRAAMLGFVATVLIELAGGRGIV 82
            RP  GFT YAE+LNGRAAM+GFVA V IE   G+GI+
Sbjct:   14 RPKAGFTTYAEKLNGRAAMIGFVAIVAIEYLTGKGIM 50          
BLAST of Gchil9343.t1 vs. uniprot
Match: UPI001683BB08 (hypothetical protein n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001683BB08)

HSP 1 Score: 53.1 bits (126), Expect = 1.900e-7
Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   46 RPAPGFTVYAERLNGRAAMLGFVATVLIELAGGRGIV 82
            RP  GF  YAERLNGRAAM+GFV  VLIEL  G+G++
Sbjct:   14 RPKAGFNDYAERLNGRAAMVGFVLVVLIELVTGKGVL 50          
BLAST of Gchil9343.t1 vs. uniprot
Match: A0A2W6ZNR0_9CYAN (Uncharacterized protein n=13 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A2W6ZNR0_9CYAN)

HSP 1 Score: 52.4 bits (124), Expect = 3.800e-7
Identity = 27/38 (71.05%), Postives = 29/38 (76.32%), Query Frame = 0
Query:   45 DRPAPGFTVYAERLNGRAAMLGFVATVLIELAGGRGIV 82
            +R   GF  YAERLNGRAAMLGFVA VL ELA G+ IV
Sbjct:   13 ERSKAGFNDYAERLNGRAAMLGFVALVLFELATGQAIV 50          
BLAST of Gchil9343.t1 vs. uniprot
Match: A0A6H2NL48_9CYAN (Uncharacterized protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A6H2NL48_9CYAN)

HSP 1 Score: 52.0 bits (123), Expect = 5.390e-7
Identity = 24/37 (64.86%), Postives = 29/37 (78.38%), Query Frame = 0
Query:   46 RPAPGFTVYAERLNGRAAMLGFVATVLIELAGGRGIV 82
            RP  GF  YAERLNGRAAM+GF+  VLIEL  G+G++
Sbjct:   14 RPKVGFNHYAERLNGRAAMIGFITIVLIELLTGQGVL 50          
BLAST of Gchil9343.t1 vs. uniprot
Match: UPI00030F9F44 (chlorophyll a/b-binding protein n=1 Tax=Nodosilinea nodulosa TaxID=416001 RepID=UPI00030F9F44)

HSP 1 Score: 52.0 bits (123), Expect = 5.390e-7
Identity = 26/38 (68.42%), Postives = 28/38 (73.68%), Query Frame = 0
Query:   45 DRPAPGFTVYAERLNGRAAMLGFVATVLIELAGGRGIV 82
            +RP  GF  YAERLNGRAAMLGFVA VL E   G+ IV
Sbjct:   13 ERPKSGFNDYAERLNGRAAMLGFVALVLFEAVTGQAIV 50          
The following BLAST results are available for this feature:
BLAST of Gchil9343.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IEM2_9FLOR3.590e-1168.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
UPI0018EFA5351.140e-873.68chlorophyll a/b-binding protein n=2 Tax=Phormidium... [more]
A0A8J7A9Z9_9CYAN6.670e-868.42Uncharacterized protein n=1 Tax=Romeria aff. graci... [more]
B4WSG6_SYNS76.670e-866.67Uncharacterized protein n=2 Tax=Cyanobacteria TaxI... [more]
A0A7T5E5Q1_9CYAN8.500e-871.05Uncharacterized protein n=2 Tax=Leptolyngbya sp. B... [more]
A0A0C1YCV3_9CYAN1.900e-767.57CAB/ELIP/HLIP family protein n=2 Tax=Cyanobacteria... [more]
UPI001683BB081.900e-767.57hypothetical protein n=1 Tax=Pseudanabaena sp. FAC... [more]
A0A2W6ZNR0_9CYAN3.800e-771.05Uncharacterized protein n=13 Tax=Cyanobacteria/Mel... [more]
A0A6H2NL48_9CYAN5.390e-764.86Uncharacterized protein n=2 Tax=Pseudanabaenales T... [more]
UPI00030F9F445.390e-768.42chlorophyll a/b-binding protein n=1 Tax=Nodosiline... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 42..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3209656..3209952 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9343.t1Gchil9343.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3209656..3209952 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9343.t1 ID=Gchil9343.t1|Name=Gchil9343.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=99bp
MLTHGRVSRTTMSDLSSSSHAQNDAEQKAKEEEPEFLRDARWREDRPAPG
FTVYAERLNGRAAMLGFVATVLIELAGGRGIVPLAQQLLGGGGFGGAS*
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