Gchil9341.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9341.t1
Unique NameGchil9341.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length103
Homology
BLAST of Gchil9341.t1 vs. uniprot
Match: A0A2V3IYN0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYN0_9FLOR)

HSP 1 Score: 148 bits (373), Expect = 2.080e-44
Identity = 78/102 (76.47%), Postives = 89/102 (87.25%), Query Frame = 0
Query:    1 MVSTAFVSATPVLARATSSLAKTSFTSRRTIATPVRRSATIMMADKEKIPQGFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQLQALGDISSVTKALGL 102
            MVSTAFV+ATPVLAR   S++ TSFTSR  +A P RRSATIMMADKE+IPQGFT FSE LNGRAAM+G VLA+VTEAITGKGI+GQ+ ALGDI+S+T ALGL
Sbjct:    1 MVSTAFVAATPVLARTIPSVSNTSFTSRSIVALPARRSATIMMADKERIPQGFTAFSEVLNGRAAMLGIVLAIVTEAITGKGIVGQVAALGDIASITHALGL 102          
BLAST of Gchil9341.t1 vs. uniprot
Match: A0A2V3IYF7_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYF7_9FLOR)

HSP 1 Score: 103 bits (256), Expect = 1.400e-26
Identity = 58/101 (57.43%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    5 AFVSATPVLARATSSLAKTSFTSRRTIA-TPVRRSATIMMAD---KEKIPQGFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQLQALGDISSVTKALG 101
            AFVS TP+++R  +++   S TSRR++A TPVRR+A  M  +    EKIPQGFT FSE LNGRAAM+GF LAVVTE ITGKGI+GQ+ ++ +I ++  ALG
Sbjct:    2 AFVSPTPIISRTNTAVGAASITSRRSVAVTPVRRAALRMAGEGPEMEKIPQGFTSFSELLNGRAAMLGFTLAVVTELITGKGILGQVGSVFEIVNLASALG 102          
BLAST of Gchil9341.t1 vs. uniprot
Match: B0BZB4_ACAM1 (High light inducible protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) TaxID=329726 RepID=B0BZB4_ACAM1)

HSP 1 Score: 60.1 bits (144), Expect = 3.490e-10
Identity = 26/38 (68.42%), Postives = 32/38 (84.21%), Query Frame = 0
Query:   52 GFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQLQA 89
            GF+ FSE  NGR AM+GF LA++TEA+TGKGI+GQL A
Sbjct:    8 GFSAFSETWNGRLAMIGFTLAIITEALTGKGILGQLVA 45          
BLAST of Gchil9341.t1 vs. uniprot
Match: UPI0002483FDE (chlorophyll a/b-binding protein n=1 Tax=Acaryochloris sp. CCMEE 5410 TaxID=310037 RepID=UPI0002483FDE)

HSP 1 Score: 58.9 bits (141), Expect = 1.010e-9
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0
Query:   52 GFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQL 87
            GF+ FSE  NGR AM+GF LA++TEA+TGKGIIGQL
Sbjct:    9 GFSAFSETWNGRLAMIGFTLALITEALTGKGIIGQL 44          
BLAST of Gchil9341.t1 vs. uniprot
Match: B0CET4_ACAM1 (High light inducible protein n=2 Tax=Acaryochloridaceae TaxID=1890429 RepID=B0CET4_ACAM1)

HSP 1 Score: 58.5 bits (140), Expect = 1.440e-9
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   52 GFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQLQAL 90
            GFT F+E L GR AMVGF LAV+TE +TG+GI+GQ+ AL
Sbjct:    9 GFTSFAETLGGRLAMVGFSLAVITEVLTGQGIVGQIAAL 47          
BLAST of Gchil9341.t1 vs. uniprot
Match: A0A8J6QE11_9CYAN (Uncharacterized protein n=1 Tax=Vulcanococcus sp. Clear-D1 TaxID=2766970 RepID=A0A8J6QE11_9CYAN)

HSP 1 Score: 58.5 bits (140), Expect = 2.540e-9
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 0
Query:   40 TIMMADKEKIPQ---GFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQL 87
            T M     KIP    GF  F+E+LNGR AM+GFV+A+ TEA++GKGI+GQL
Sbjct:   21 TAMAGSDFKIPYQRTGFVPFAESLNGRLAMLGFVIAIATEALSGKGILGQL 71          
BLAST of Gchil9341.t1 vs. uniprot
Match: A0A4P7ZQM1_9SYNE (Uncharacterized protein n=1 Tax=Synechococcus sp. CB0101 TaxID=232348 RepID=A0A4P7ZQM1_9SYNE)

HSP 1 Score: 57.4 bits (137), Expect = 4.280e-9
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 0
Query:   42 MMADKEKIPQ---GFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQL 87
            M +   KIP    GF  F+E+LNGR AM+GFV+A+ TEA++GKGI+GQL
Sbjct:    1 MASSDFKIPYQRTGFVPFAESLNGRLAMLGFVIAIATEALSGKGILGQL 49          
BLAST of Gchil9341.t1 vs. uniprot
Match: A0A354B2J0_9CYAN (Uncharacterized protein n=1 Tax=Synechococcales bacterium UBA10510 TaxID=2055795 RepID=A0A354B2J0_9CYAN)

HSP 1 Score: 57.4 bits (137), Expect = 6.230e-9
Identity = 25/39 (64.10%), Postives = 33/39 (84.62%), Query Frame = 0
Query:   52 GFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQLQAL 90
            G+T  +E LNGR AM+GFVLA+ TE +TG+G+IGQ+QAL
Sbjct:   27 GWTDAAEMLNGRLAMIGFVLAIATELLTGQGVIGQIQAL 65          
BLAST of Gchil9341.t1 vs. uniprot
Match: A8ZP27_ACAM1 (Conserved domain protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) TaxID=329726 RepID=A8ZP27_ACAM1)

HSP 1 Score: 56.6 bits (135), Expect = 8.210e-9
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0
Query:   52 GFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQL 87
            GF+ FSE  NGR AM+GF LA++TEA+TG+GIIGQ+
Sbjct:    9 GFSAFSETWNGRLAMIGFTLALITEALTGEGIIGQI 44          
BLAST of Gchil9341.t1 vs. uniprot
Match: A0A2T1LYU0_9CHRO (High light inducible protein n=2 Tax=Chroococcales TaxID=1118 RepID=A0A2T1LYU0_9CHRO)

HSP 1 Score: 55.5 bits (132), Expect = 2.140e-8
Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 0
Query:   43 MADKEKIPQGFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQL 87
            M +KEK   GFT F+E  NGR AM+GFV+ V TE +TGKGI+ QL
Sbjct:    1 MMEKEKF--GFTAFAENWNGRLAMLGFVIGVATELVTGKGILAQL 43          
The following BLAST results are available for this feature:
BLAST of Gchil9341.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYN0_9FLOR2.080e-4476.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYF7_9FLOR1.400e-2657.43Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
B0BZB4_ACAM13.490e-1068.42High light inducible protein n=1 Tax=Acaryochloris... [more]
UPI0002483FDE1.010e-972.22chlorophyll a/b-binding protein n=1 Tax=Acaryochlo... [more]
B0CET4_ACAM11.440e-966.67High light inducible protein n=2 Tax=Acaryochlorid... [more]
A0A8J6QE11_9CYAN2.540e-956.86Uncharacterized protein n=1 Tax=Vulcanococcus sp. ... [more]
A0A4P7ZQM1_9SYNE4.280e-957.14Uncharacterized protein n=1 Tax=Synechococcus sp. ... [more]
A0A354B2J0_9CYAN6.230e-964.10Uncharacterized protein n=1 Tax=Synechococcales ba... [more]
A8ZP27_ACAM18.210e-966.67Conserved domain protein n=1 Tax=Acaryochloris mar... [more]
A0A2T1LYU0_9CHRO2.140e-860.00High light inducible protein n=2 Tax=Chroococcales... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 8..97
e-value: 4.1E-6
score: 28.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..102
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..21
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 46..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3197736..3198044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9341.t1Gchil9341.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3197736..3198044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9341.t1 ID=Gchil9341.t1|Name=Gchil9341.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=103bp
MVSTAFVSATPVLARATSSLAKTSFTSRRTIATPVRRSATIMMADKEKIP
QGFTGFSEALNGRAAMVGFVLAVVTEAITGKGIIGQLQALGDISSVTKAL
GL*
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