Gchil9337.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9337.t1
Unique NameGchil9337.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length281
Homology
BLAST of Gchil9337.t1 vs. uniprot
Match: A0A2V3IYH5_9FLOR (PXMP2/4 family protein 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYH5_9FLOR)

HSP 1 Score: 446 bits (1146), Expect = 1.990e-156
Identity = 218/281 (77.58%), Postives = 243/281 (86.48%), Query Frame = 0
Query:    1 MTVPVVAMHTAQKGRLPHPVVQNSALRKCRFPKRSLGLLLLITGLVVILYDIVPSFIDSSHVSSFHPHEFRRISRRTLRLYQRQLHLHPLSSRAITAGIIFFIADIFAQFLSSSTTTSLCYEFQFDRLFRYSLYGLIVMGPFLFVWYEAMHMYGPADDLQGSLVKCVFEQITLEPCCIIMYIVYDAIICRRGFLSARKTLASKFLPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFSGNVNRSASQPAKY-LSTDRRSAPSTPRRRSSTSV 280
            MTVPV  MH AQKGRLP P +  S  R+C FP+RSLG+LLLI G +V+LYDI P+FIDS+H+S+F PH  RR SRRTLRLYQRQLHLHPLSSRA+TA IIFFIAD+FAQFLSS  + SLC+ FQFDRLFRY+LYGL+VMGPFL+VWYEAMH YGP DDL+GSLVKC+FEQITLEPCCIIMYI YDAIICRRG  +AR+TLA+KFLPLWFKNAVFWLPANFANYYIGTPDLRV+FANLCSLFWNIYFSGNVNRS SQ +   LS  R+S PSTPR  SS SV
Sbjct:    1 MTVPVSIMHAAQKGRLPRPAIHPSKRRRCHFPRRSLGVLLLILGAIVVLYDIAPTFIDSTHISAFSPHHVRRFSRRTLRLYQRQLHLHPLSSRAVTAAIIFFIADVFAQFLSSPRSASLCFAFQFDRLFRYTLYGLVVMGPFLYVWYEAMHQYGPDDDLRGSLVKCLFEQITLEPCCIIMYIGYDAIICRRGLATARQTLAAKFLPLWFKNAVFWLPANFANYYIGTPDLRVIFANLCSLFWNIYFSGNVNRSPSQQSSNNLSHQRKSPPSTPRHLSSNSV 281          
BLAST of Gchil9337.t1 vs. uniprot
Match: R7QG39_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG39_CHOCR)

HSP 1 Score: 273 bits (699), Expect = 1.070e-87
Identity = 128/182 (70.33%), Postives = 147/182 (80.77%), Query Frame = 0
Query:   71 RRISRRTLRLYQRQLHLHPLSSRAITAGIIFFIADIFAQFLSSSTTTSLCYEFQFDRLFRYSLYGLIVMGPFLFVWYEAMHMYGPADDLQGSLVKCVFEQITLEPCCIIMYIVYDAIICRRGFLSARKTLASKFLPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFSGNVNR 252
            RR+++RTLRLYQRQLHLHPL SRAITAG+IFFIAD  AQ L+          F F RL RY++YGLI MGPFL++WY  M+ YGP DD+ GSL+KC+FEQITLEP CI MYI+YD  +CRRG+   RK L ++F PLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFS  VN+
Sbjct:   99 RRVAKRTLRLYQRQLHLHPLLSRAITAGVIFFIADFLAQVLNRRANPKPP-AFSFTRLLRYTVYGLIAMGPFLYLWYALMNEYGPEDDISGSLIKCIFEQITLEPICISMYIIYDGFVCRRGWSPVRKALDAQFFPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFSSKVNK 279          
BLAST of Gchil9337.t1 vs. uniprot
Match: A0A1X6NTV4_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTV4_PORUM)

HSP 1 Score: 208 bits (530), Expect = 8.810e-60
Identity = 112/211 (53.08%), Postives = 140/211 (66.35%), Query Frame = 0
Query:   41 LITGLVVILYDIVPSFIDSSHVSSFHPHEFRRISRRTLRLYQRQLHLHPLSSRAITAGIIFFIADIFAQFLSSSTTTSLCYEFQFDRLFRYSLYGLIVMGPFLFVWYEAMHMYGPADDLQGSLVKCVFEQITLEPCCIIMYIVYDAIICRRGFLSARKTLASKFLPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFSGNVN 251
            L+ G++++L+ I  +     H ++      RR  RR L +Y   LH  PL SRAI+AG+IF  AD  AQ LSSSTT      F + RL RYS YGLIVMGPFL++WY  MH+YGP D L G+  K +FEQITLEP CI  Y+V+D  + RR     R  L ++F  L  KNAVFW+PANF+NY  GTPDLRV++ANLCSLFWN+YFS  VN
Sbjct:  344 LLIGVLIVLFLIAFASFVRLHATTI-----RRTCRRLLLIYIHILHARPLVSRAISAGVIFLSADFLAQRLSSSTT-----PFDYVRLLRYSSYGLIVMGPFLYLWYSVMHLYGPDDTLIGAAQKALFEQITLEPLCIGGYMVWDGAMRRRPMGEVRARLRAQFWGLLLKNAVFWVPANFSNYAAGTPDLRVLYANLCSLFWNVYFSSFVN 544          
BLAST of Gchil9337.t1 vs. uniprot
Match: A0A5J4YZM9_PORPP (Protein Mpv17 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZM9_PORPP)

HSP 1 Score: 176 bits (446), Expect = 1.390e-50
Identity = 92/197 (46.70%), Postives = 118/197 (59.90%), Query Frame = 0
Query:   71 RRISRRTLRLYQRQLHLHPLSSRAITAGIIFFIADIFAQFLSSSTTTSLCYEFQFDRLFRYSLYGLIVMGPFLFVWYEAMHMYGPADDLQGSLVKCVFEQITLEPCCIIMYIVYDAIICRRGFLSARKTLASKFLPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFSGNV----NRSASQPAKYLST 263
            RR +R  ++ Y R L   PL +RA+TAGIIF  ADI AQ L  +T  SL       R  ++  YG   MGPFL +WY  MH Y P D   GSLVK +FE++TLEP CI  +++YD ++ R+            F+ LW KNA FW+P NF NYY+GTPD RV+FAN CS +WN+YFS  V    N + S+P    ST
Sbjct:   71 RRQTRMGIKWYTRVLIKLPLFARAVTAGIIFSCADISAQLLVPNTAYSL------KRTLKFGSYGFGFMGPFLHLWYMFMHEYAPGDSFAGSLVKSIFEEVTLEPICIACFLLYDCLLNRKKPHEISARYRESFMSLWKKNAYFWIPGNFLNYYVGTPDFRVIFANCCSFWWNVYFSLQVAQVPNSAISKPLNSRST 261          
BLAST of Gchil9337.t1 vs. uniprot
Match: A0A5J4YZN3_PORPP (PXMP2/4 family protein 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZN3_PORPP)

HSP 1 Score: 146 bits (369), Expect = 2.000e-38
Identity = 82/206 (39.81%), Postives = 114/206 (55.34%), Query Frame = 0
Query:   79 RLYQRQLHLHPLSSRAITAGIIFFIADIFAQFL-----------SSSTTT------------SLCYEFQFD--RLFRYSLYGLIVMGPFLFVWYEAMHMYGPADDLQGSLVKCVFEQITLEPCCIIMYIVYDAIICRRGFLSARKTLASKFLPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFSGNVNRSASQPAK 259
            R Y   L   P  ++ I+ G+I F+AD   Q +           SS+  T            SL   F+ D  RL +++LYGL+V GP+LF+WY  +  YGP D L  SL KCV EQ+ LEP CI  Y ++  +  R+          S+FL L+ KNA+FW+PANF NY++GT D RVVFA++CS FW ++ +   NR   +PAK
Sbjct:   98 REYLWLLRHKPFRTKVISVGVITFLADCTGQIMMHLQSIRGQRRSSARHTVLVTSDRHQKGKSLIRGFRLDVWRLIKFTLYGLLVNGPWLFLWYNLIAKYGPGDGLLNSLQKCVLEQLVLEPACISNYALWFHVTNRKPMRECLAWYRSEFLGLYRKNAIFWMPANFLNYFLGTGDFRVVFASVCSFFWTVFMNLLFNRKKEEPAK 303          
BLAST of Gchil9337.t1 vs. uniprot
Match: A0A7S0XJ68_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJ68_9RHOD)

HSP 1 Score: 119 bits (297), Expect = 3.170e-29
Identity = 56/119 (47.06%), Postives = 79/119 (66.39%), Query Frame = 0
Query:   69 EFRRISRRTLRLYQRQLHLHPLSSRAITAGIIFFIADIFAQFLSSSTTTSLCYEFQFDRLFRYSLYGLIVMGPFLFVWYEAMHMYGPADDLQGSLVKCVFEQITLEPCCIIMYIVYDAI 187
            + R+ +RR L+ Y   L LHP S RAITAG+IF +ADI AQ L+ +       +F + R+ +Y +YGL +MGPFL+ WY  MH Y P D   G++ K +FEQ+TLEP CI+ Y++YD +
Sbjct:   80 KLRKYTRRGLKWYLGVLELHPFSGRAITAGLIFTMADICAQKLAGTD------KFSYKRVLKYGIYGLCIMGPFLYGWYGLMHRYAPGDSFLGAVSKALFEQLTLEPMCIVGYMIYDGV 192          
BLAST of Gchil9337.t1 vs. uniprot
Match: A0A835YMP8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP8_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 5.270e-10
Identity = 56/187 (29.95%), Postives = 85/187 (45.45%), Query Frame = 0
Query:   81 YQRQLHLHPLSSRAITAGIIFFIADIFAQFLSSSTTTSLCYEFQFDRLFRYSLYGLIVMGPFLFVWYEAMHMYGPADDLQGSLVKCVFEQITLEP---CCII---MYIVY---DAIICRR----GFLSARKT--LASKFLPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFSGNVNR 252
            Y  QL   PL ++A T+ II  I D  AQ L + T   + + F   R   Y    + +    +  WY  +       +        VF Q+ ++    C ++    YIV+    A++  R    G L+   T  L+ +  P+   N   W  ANF N+ +  P LRV+FAN  ++FWNIY SG+ NR
Sbjct:   79 YLGQLDRRPLITKAWTSTIIGCIGDTIAQVLEARTK-GIPFVFDTQRTAIYIFCAVAIGSTAVHYWYNFLDQKVANPNTVKGKWNRVFRQLAVDQTVGCTVLNAGFYIVHTIVSAVVMGRVFPLGALADTITGKLSREMWPMLINNWKLWPAANFINFSLVPPQLRVLFANFVAIFWNIYLSGSANR 264          
BLAST of Gchil9337.t1 vs. uniprot
Match: A0A0K9RZ65_SPIOL (Uncharacterized protein n=2 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9RZ65_SPIOL)

HSP 1 Score: 67.0 bits (162), Expect = 8.120e-10
Identity = 48/180 (26.67%), Postives = 82/180 (45.56%), Query Frame = 0
Query:   81 YQRQLHLHPLSSRAITAGIIFFIADIFAQFLSSSTTTSLCYEFQFDRLFRYSLYGLIVMGPFLFVWYEAMHMYGPADDLQGSL-VKCVFEQITLEPCCIIMYIVYDAIICR-RGFLSARKTLASKFLPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFSGNVNRSASQPA 258
            Y  QL +HPL ++AITAG++   +D  AQ +S           QF RLF   +YG    GPF    ++ M           ++  K + EQ+T  P   + +++Y  ++   R +   +  +   + P+   +  FW   N+ NY      LRV+F +L +  W I+ +     +A + A
Sbjct:   12 YLLQLQIHPLRTKAITAGVLAGCSDFTAQKISGIK------RIQFRRLFLIMIYGFFYSGPFGHFLHKVMDKIFKGKKGNTTVGQKVLLEQLTASPWNNMFFMMYYGLVVEGRSWSLVKSKIKKDYPPVQLTSWKFWPIVNWVNYQYMPLQLRVLFHSLIASCWAIFLNLKAKSTAIKKA 185          
BLAST of Gchil9337.t1 vs. uniprot
Match: A0A6P5FUU4_ANACO (peroxisomal membrane protein PMP22-like n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5FUU4_ANACO)

HSP 1 Score: 66.6 bits (161), Expect = 1.100e-9
Identity = 45/169 (26.63%), Postives = 79/169 (46.75%), Query Frame = 0
Query:   81 YQRQLHLHPLSSRAITAGIIFFIADIFAQFLSSSTTTSLCYEFQFDRLFRYSLYGLIVMGPFLFVWYEAMH-MYGPADDLQGSLVKCVFEQITLEPCCIIMYIVYDAIIC-RRGFLSARKTLASKFLPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFS 247
            Y  QL LHPL ++AITAG++  ++D  AQ LS           Q  RL    L+G    GPF    ++ +  ++    D +    K + EQ+T+ P   ++++ Y  ++  RR F   +  +  ++  +      FW    + NY+     LRV+F +  +  W I+ +
Sbjct:   12 YMLQLQLHPLRTKAITAGVLAGVSDSVAQKLSGIQ------RIQLRRLLLKVLFGFAYGGPFGHFMHKLLDTIFKGKKDKKTVAKKVLLEQLTVSPWNHLLFLFYYGLVVERRPFPEVKNRVKKQYPSVQLTAWTFWPAVGWINYHYMPLQLRVIFHSFVACCWGIFLN 174          
BLAST of Gchil9337.t1 vs. uniprot
Match: A0A8D8TZ79_9HEMI (Mpv17-like protein n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8TZ79_9HEMI)

HSP 1 Score: 66.2 bits (160), Expect = 1.770e-9
Identity = 32/126 (25.40%), Postives = 60/126 (47.62%), Query Frame = 0
Query:  122 EFQFDRLFRYSLYGLIVMGPFLFVWYEAMHMYGPADDLQGSLVKCVFEQITLEPCCIIMYIVYDAIICRRGFLSARKTLASKFLPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFS 247
            +  +DR+FR+SL+G   + P L+ W        P + L+ +L K + EQ+T  P  +I +     ++  +        ++ KF P +    + W  A   NY + +   RV + ++CSL W  + +
Sbjct:   57 KIDYDRIFRFSLFGTFFVAPTLYYWLSVARRRWPLNTLRHTLTKALVEQVTYTPFAMISFYFGMTLLEGKTVDDGLHEVSHKFWPTYRVGVMIWPIAQIINYSLVSEKNRVPYVSICSLLWTSFLA 182          
The following BLAST results are available for this feature:
BLAST of Gchil9337.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYH5_9FLOR1.990e-15677.58PXMP2/4 family protein 4 n=1 Tax=Gracilariopsis ch... [more]
R7QG39_CHOCR1.070e-8770.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NTV4_PORUM8.810e-6053.08Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YZM9_PORPP1.390e-5046.70Protein Mpv17 n=1 Tax=Porphyridium purpureum TaxID... [more]
A0A5J4YZN3_PORPP2.000e-3839.81PXMP2/4 family protein 2 n=1 Tax=Porphyridium purp... [more]
A0A7S0XJ68_9RHOD3.170e-2947.06Hypothetical protein (Fragment) n=1 Tax=Erythrolob... [more]
A0A835YMP8_9STRA5.270e-1029.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0K9RZ65_SPIOL8.120e-1026.67Uncharacterized protein n=2 Tax=Chenopodioideae Ta... [more]
A0A6P5FUU4_ANACO1.100e-926.63peroxisomal membrane protein PMP22-like n=3 Tax=An... [more]
A0A8D8TZ79_9HEMI1.770e-925.40Mpv17-like protein n=1 Tax=Cacopsylla melanoneura ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007248Mpv17/PMP22PFAMPF04117Mpv17_PMP22coord: 195..247
e-value: 1.4E-12
score: 47.5
IPR007248Mpv17/PMP22PANTHERPTHR11266PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17coord: 76..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 167..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 188..206
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 148..166
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..250
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 251..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..226
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 227..231
NoneNo IPR availableTMHMMTMhelixcoord: 128..147
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 167..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3186030..3186872 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9337.t1Gchil9337.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3186030..3186872 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9337.t1 ID=Gchil9337.t1|Name=Gchil9337.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=281bp
MTVPVVAMHTAQKGRLPHPVVQNSALRKCRFPKRSLGLLLLITGLVVILY
DIVPSFIDSSHVSSFHPHEFRRISRRTLRLYQRQLHLHPLSSRAITAGII
FFIADIFAQFLSSSTTTSLCYEFQFDRLFRYSLYGLIVMGPFLFVWYEAM
HMYGPADDLQGSLVKCVFEQITLEPCCIIMYIVYDAIICRRGFLSARKTL
ASKFLPLWFKNAVFWLPANFANYYIGTPDLRVVFANLCSLFWNIYFSGNV
NRSASQPAKYLSTDRRSAPSTPRRRSSTSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007248Mpv17_PMP22