Gchil9336.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9336.t1
Unique NameGchil9336.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length716
Homology
BLAST of Gchil9336.t1 vs. uniprot
Match: A0A2V3J1A8_9FLOR (Protein aardvark n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1A8_9FLOR)

HSP 1 Score: 366 bits (939), Expect = 7.070e-113
Identity = 373/721 (51.73%), Postives = 456/721 (63.25%), Query Frame = 0
Query:    1 MEADLTIEHIRPRTEQERLRDAIFELEASDHTDSTSTPTFFQALHIEPVTPL------GGNGKSITQAYSTYSSAAEYTPTSQAKKREYSRRERLKETDCPCYKQFLNESPDTEEDGKLLLKALDIMTPTGQFCRSRADKEGGIESLREAVHVYLFPKEGESPENEKNILYLLKKNIRKGNSNEKSCMDAVLSLVFENIRNNSTNELVQERGCHLLTKLSRDSVEVQTAIVHRGGVQLVINAMATHTKTPGVQSRAIGALLCLTMNTAARTQIVERRGAEMISWSMREFPGQLLLQKNGATCLCNLAFNSEENKRRIGRIGGIHAVVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGGIDLILSCMKVHRFSKRVAERGCCVLRYLFFIRANRLRFAECNGVDALVRIMRDGAEHSDVSETVLHAIGNAVYDNLDSKRAVGRLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINVTVLEEGLRQMRDLEAQLVVTRSKKMHLDKVMVQCQAAALLTRLKKVSSASVMLSAVPKKTISRIDTMRKVASKAALVKRP----KSHVRKRASDDVPYNGKLVRLVGS 711
            ME +LTI H+RPRTE ERLRD  ++ E SD     S      +L     TP+      G            +     +      +KRE SRRERLK T     +  +N   + E DG   L+  DI++P  Q   S ++ +     +++AV+  LFP+E    EN K  + ++KK++   +   +S ++ +L LVF+ ++ N  NEL+Q+RGC +LT++SRDS   Q AIV +GGV L++ AM THT++  VQSRAI ALLCLT +  ARTQI++ RG E+ISW+MREF    LL KNGATCLCNL+F   E+KRRIGRIGGIH VV+A                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                      +GE  GI+L+LSC+KVHRF+K+V E+GC  LRYL F +ANR RF E NG+D+LVRIMRDGAEH  VSE V++ +GNA  DN+DSKRAVGR GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +T LEEG RQ R+LEA  VVTRS+ MHLDK MV+ QA ALL RLK   +A    +A PKK +S ID+ +K+  +    KR     K H   R  +D P   KL++L+GS
Sbjct:    2 MEPELTIVHVRPRTEMERLRDVAYDAEDSDLVSIPSDNISLGSL----ATPVPKSFTWGCENNGANSMLEPFCVKPPHEDIDTPRKRENSRRERLKRT-AGRIRSAMNLHVENE-DGSARLQQNDILSPVSQCSVSGSEDDLSARKVQDAVNKLLFPEEYPPSENTKKTMSIIKKSVSMISEGTESHLELILGLVFDEMKKNPRNELIQDRGCLILTRISRDSKHTQGAIVAKGGVPLIVRAMTTHTRSSNVQSRAISALLCLTTDRTARTQIIDHRGTELISWAMREFSSIPLLLKNGATCLCNLSFGCGESKRRIGRIGGIHVVVNAMNKFPQDADLQARCCLALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCADEWENRMRAAELGVVPIALKILRKNLQNGPMCEHALTLLRNISIQNDHNQVSIGEHDGIELVLSCIKVHRFNKKVVEKGCGTLRYLLFAKANRDRFLESNGIDSLVRIMRDGAEHVSVSEAVIYTVGNATCDNIDSKRAVGRNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTALEEGWRQARELEAVAVVTRSRCMHLDKSMVRIQADALLKRLKTNPNAC---AACPKKKVSMIDSGQKLGMRVLSGKRSRCDSKGHNTPR-QEDAPPTRKLLQLLGS 712          
BLAST of Gchil9336.t1 vs. uniprot
Match: A0A1X6P700_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P700_PORUM)

HSP 1 Score: 122 bits (306), Expect = 3.200e-25
Identity = 272/554 (49.10%), Postives = 342/554 (61.73%), Query Frame = 0
Query:  100 FLNESPDTEEDGKLLLKALDIMTPTGQFCRSR--ADKEGGIESLREAVHVYLFPKEGESPENEKNILYLLKKNIRKGNSNEKSCMDAVLSLVFENIRNNSTNELVQERGCHLLTKLSRDSVEVQTAIVHRGGVQLVINAMATHTKTPGVQSRAIGALLCLTMNTAARTQIVERRGAEMISWSMREFPGQLLLQKNGATCLCNLAFNSEENKRRIGRIGGIHAVVSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGEDGGIDLILSCMKVHRFSKRVAERGCCVLRYLFFIRANRLRFAECNGVDALVRIMRD-GAEHSDVSETVLHAIGNAVYDNLDSKRAVGRLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINVTVLEEGLRQMRDLEAQLVVTRSKKMHLDKVMVQCQAAALLTRL 650
             ++ESP  ++DGK   +  D+    G     +  ++ +  I  +++ + V L P +G S    +  + +L+  + + +   +  +   L+LV+  + ++  +  VQER C +L KL+R+   VQ+AI   GGV+ VI+ M  H ++  VQ RA+ ALL LT  +  RT I++ +GAE +   M+EF   + +Q NG+T LCNLAF S+ NK+RIG+IG        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                YL F R NRLR     G+DAL+R++RD  A  S V+E+ ++AIGNAV+D  ++K AVGR G                                          XXXXXXXXXXXXXXXXXXXXXXXXXXXX      +E ++QM++L+ + VV    + H D   VQCQAAALL RL
Sbjct:   60 LVSESP-ADDDGKES-EPPDVPGGAGSSGGDKQLSESQRAIVEMKDCLAVLLAPGDGASSNAMREAMAMLRVLVHRRSDPSRERLSVALTLVYRAMDDHLNDGFVQERACLVLGKLAREGPAVQSAIGTSGGVRAVISTMVMHRQSAVVQERAVLALLSLTGTSNTRTLIMDAKGAEAVVCGMKEFSDLVSVQSNGSTTLCNLAFGSDGNKQRIGKIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLLFSRENRLRMQPAGGLDALIRVLRDYSAGSSAVAESAIYAIGNAVFDLPENKSAVGRSGGIVALVNVMSVHLNDAVVQEHGCRALRNLADADDLNTRLLADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDENIQQMKELDVERVVRSLHETHADSSKVQCQAAALLERL 611          
BLAST of Gchil9336.t1 vs. uniprot
Match: A0A0S4JAU2_BODSA (Uncharacterized protein (Fragment) n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4JAU2_BODSA)

HSP 1 Score: 68.6 bits (166), Expect = 3.820e-8
Identity = 50/153 (32.68%), Postives = 80/153 (52.29%), Query Frame = 0
Query:  172 RKGNSNEKSCMDAVLSLVFENIRNNSTNELVQERGCHLLTKLSRDSVEVQTAIVHRGGVQLVINAMATHTKTPGVQSRAIGALLCLTMNTAARTQIV-ERRGAEMISWSMREFPGQLLLQKNGATCLCNLAFNSEENKRRIGRIGGIHAVVSA 323
            RK   ++  C+  VL  +    + N +   +QE GC+LL+ LS DS  +   I  +GG+QLV+ AMAT  K   + + A  AL  LT N +   +IV E  G   I  +M+E   +  LQ+NG   +  + +N++  K  + R+ GI  ++ A
Sbjct:  323 RKQQIHQTGCVPLVLEAMKAFSKGNVS---IQEEGCNLLSYLSFDSEVITHTITQQGGIQLVLQAMATFPKAQNLLTAACAALSGLTFNNSVGQKIVLESDGVAAIIKAMKE-GDKARLQENGCLAIGTMCWNTDL-KAEVVRLDGITVIMKA 470          
The following BLAST results are available for this feature:
BLAST of Gchil9336.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J1A8_9FLOR7.070e-11351.73Protein aardvark n=1 Tax=Gracilariopsis chorda Tax... [more]
A0A1X6P700_PORUM3.200e-2549.10Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A0S4JAU2_BODSA3.820e-832.68Uncharacterized protein (Fragment) n=1 Tax=Bodo sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 217..259
e-value: 270.0
score: 2.2
coord: 350..390
e-value: 210.0
score: 2.9
coord: 304..346
e-value: 1.7
score: 17.7
coord: 479..521
e-value: 14.0
score: 12.1
coord: 392..434
e-value: 30.0
score: 9.5
coord: 567..609
e-value: 250.0
score: 2.3
coord: 523..565
e-value: 2.6E-6
score: 37.0
coord: 436..478
e-value: 7.2
score: 14.3
IPR000225ArmadilloPFAMPF00514Armcoord: 527..565
e-value: 1.0E-5
score: 25.4
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 534..578
score: 12.4074
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 228..272
score: 9.2574
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 278..503
e-value: 2.8E-31
score: 111.0
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 504..677
e-value: 3.6E-15
score: 58.2
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 111..277
e-value: 7.1E-10
score: 40.1
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 184..346
coord: 489..663
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 184..346
coord: 489..663
NoneNo IPR availablePANTHERPTHR22895:SF7PROTEIN AARDVARKcoord: 360..482
NoneNo IPR availablePANTHERPTHR22895UNCHARACTERIZEDcoord: 360..482
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 189..608

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3183771..3185918 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9336.t1Gchil9336.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3183771..3185918 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9336.t1 ID=Gchil9336.t1|Name=Gchil9336.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=716bp
MEADLTIEHIRPRTEQERLRDAIFELEASDHTDSTSTPTFFQALHIEPVT
PLGGNGKSITQAYSTYSSAAEYTPTSQAKKREYSRRERLKETDCPCYKQF
LNESPDTEEDGKLLLKALDIMTPTGQFCRSRADKEGGIESLREAVHVYLF
PKEGESPENEKNILYLLKKNIRKGNSNEKSCMDAVLSLVFENIRNNSTNE
LVQERGCHLLTKLSRDSVEVQTAIVHRGGVQLVINAMATHTKTPGVQSRA
IGALLCLTMNTAARTQIVERRGAEMISWSMREFPGQLLLQKNGATCLCNL
AFNSEENKRRIGRIGGIHAVVSAMNNFIGDADLQARCCLALRNLTCGLRA
NQWMAGRCQAMEAVLQSMRLMKSDMNIQYHGCVALANLCAEEAENRDRAA
NLRVFKVATELLRKHMLNSSLCEHALTVLRNICTHSDQNQMNVGEDGGID
LILSCMKVHRFSKRVAERGCCVLRYLFFIRANRLRFAECNGVDALVRIMR
DGAEHSDVSETVLHAIGNAVYDNLDSKRAVGRLGGIAALVQIMSNHLDSA
TIQEQACRALRNLADADDLNLRLITECGAIDAVLLAMMGYLDNGNIQEQG
CAMLINVTVLEEGLRQMRDLEAQLVVTRSKKMHLDKVMVQCQAAALLTRL
KKVSSASVMLSAVPKKTISRIDTMRKVASKAALVKRPKSHVRKRASDDVP
YNGKLVRLVGSYDST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold