Gchil9333.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9333.t1
Unique NameGchil9333.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length395
Homology
BLAST of Gchil9333.t1 vs. uniprot
Match: A0A2V3IYD3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYD3_9FLOR)

HSP 1 Score: 614 bits (1584), Expect = 2.490e-219
Identity = 310/398 (77.89%), Postives = 346/398 (86.93%), Query Frame = 0
Query:    1 MRVASPERLQTCVHHFLLGINVLPRWIDAAAASSDRPGRGHYEWGNWSDALRTLNMWLFGGPWRTIIADIRLARLVTSISELHKLKDQIVWEIVEQTYIQAERQRQSSVPEETVKTRIRSVYSWQRRHDVKKNSLMWFLDFAFVLAAYSEFQARFLFTESPIPAWHPERTVPSLSPARFGIQATQMELEMIQNNFLPFYARVPRLDDIHVLRARRFAHQFCHNVIPPQVVMDTDVRETRGMPREDKAVDFMTPWLESMNTEQNEQRWHTLIRAVINERSVVADFELFKGEVCRAIVSLLLLQLTQAPAVDSSYVYDMAAVTAVDQSEKELLVPSRLPGQKKKRPVSRRTLRGDLEERIRRYESGYREGSQPPSDAP----RFQGGGASSSGPPERGIG 394
            MRVASP+ LQTCV +FL  I+VLPRWIDAA+ S+DRPGRGHYEWGNWSD LR+L MW+FGGPWRTIIADIRLA+LVTSIS+LHKLKDQIVWEIVEQTYI+AERQR SSVP++TVKTRIRSV+SWQRRHDVKKNSLMWFLDFAFVLAAYSEFQAR LFT SPIP W PE TVPSL+PA+FG +A++ME +MI+N +LPFYARVP L D HVLRAR  A QFCH+V PP+VVMDTDVRETRGMPREDKAVDFMTPWLESM+  +NEQRW  L+RAV++E   V DFELFKGEVCRAIVSLLLLQLT + AVD+SYVYD+A+VTAV+QSEKEL+V SRLPGQKKKR VSRRTLRG LEER+RRY+S YRE   PP        R   GGASSSGP ERGIG
Sbjct:    1 MRVASPQSLQTCVQNFLQSIHVLPRWIDAAS-STDRPGRGHYEWGNWSDELRSLTMWIFGGPWRTIIADIRLAKLVTSISDLHKLKDQIVWEIVEQTYIRAERQRNSSVPDDTVKTRIRSVFSWQRRHDVKKNSLMWFLDFAFVLAAYSEFQARLLFTSSPIPQWQPETTVPSLTPAQFGTEASRMEAQMIENGYLPFYARVPHLSDTHVLRARALAQQFCHSVTPPEVVMDTDVRETRGMPREDKAVDFMTPWLESMDAPENEQRWDALVRAVVSETHSVGDFELFKGEVCRAIVSLLLLQLTHSSAVDASYVYDIASVTAVEQSEKELVVSSRLPGQKKKRTVSRRTLRGALEERLRRYQSAYREALHPPXXXXXXXXRIHPGGASSSGPSERGIG 397          
BLAST of Gchil9333.t1 vs. uniprot
Match: R7QNW8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNW8_CHOCR)

HSP 1 Score: 379 bits (972), Expect = 2.180e-127
Identity = 192/326 (58.90%), Postives = 249/326 (76.38%), Query Frame = 0
Query:   56 MWLFGGPWRTIIADIRLARLVTSISELHKLKDQIVWEIVEQTYIQAERQRQSSVPEETVKTRIRSVYSWQRRHDVKKNSLMWFLDFAFVLAAYSEFQARFLFTESPIPAWHPERTVPSLSPARFGIQATQMELEMIQNNFLPFYARVPRLDDIHVLRARRFAHQFCHNVIPPQVVMDTDVRETRGMPREDKAVDFMTPWLESMNTEQNEQRWHTLIRAVINERSVVADFELFKGEVCRAIVSLLLLQLTQAPAVDSSYVYDMAAVTAVDQSEKELLVPSRLPGQKKKRPVSRRTLRGDLEERIRRYESGYR-EGSQPPSDAPRFQG 380
            MW+ GGPWRTIIAD++ ARL++S+S  HKLKDQ+VWEIVEQTY +AER+R+S+  ++TVKTRIRSV+SWQRRHDVKK+SLMWFLDFAFVL+AYSEFQA FLF++S IP   P R VP L+PA+FG  + +ME EM  + FLPFY +VP L D  V  AR  A QFC+N+  P V MD DVRETRGMPRE+KAVDFMTPWL+ M++ ++   W +L+  ++ E++ ++D E+FK E+CR+IV +LL ++T+    ++ YVYD+A  TAV+QSEKELLV  R  GQK+KR VSRRTLR DL+++I  YE     +G Q  S A R +G
Sbjct:    1 MWVLGGPWRTIIADVKTARLLSSVSGFHKLKDQVVWEIVEQTYQRAERRRRSTAEKDTVKTRIRSVFSWQRRHDVKKHSLMWFLDFAFVLSAYSEFQAHFLFSDSTIPQNDPARMVPLLAPAQFGTHSNRMEQEMFNHGFLPFYCKVPGLTDKEVSMARTLASQFCYNLDRPIVDMDVDVRETRGMPREEKAVDFMTPWLQMMSSREHASVWTSLVMRILEEKNTLSDLEIFKSELCRSIVIVLLSEMTKPDHREAGYVYDIAGSTAVEQSEKELLVSLRTAGQKRKRTVSRRTLRSDLDQQIMAYERNMSVQGGQASSSAARKRG 326          
The following BLAST results are available for this feature:
BLAST of Gchil9333.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IYD3_9FLOR2.490e-21977.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QNW8_CHOCR2.180e-12758.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 333..394
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 152..394
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3172765..3173949 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9333.t1Gchil9333.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3172765..3173949 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9333.t1 ID=Gchil9333.t1|Name=Gchil9333.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=395bp
MRVASPERLQTCVHHFLLGINVLPRWIDAAAASSDRPGRGHYEWGNWSDA
LRTLNMWLFGGPWRTIIADIRLARLVTSISELHKLKDQIVWEIVEQTYIQ
AERQRQSSVPEETVKTRIRSVYSWQRRHDVKKNSLMWFLDFAFVLAAYSE
FQARFLFTESPIPAWHPERTVPSLSPARFGIQATQMELEMIQNNFLPFYA
RVPRLDDIHVLRARRFAHQFCHNVIPPQVVMDTDVRETRGMPREDKAVDF
MTPWLESMNTEQNEQRWHTLIRAVINERSVVADFELFKGEVCRAIVSLLL
LQLTQAPAVDSSYVYDMAAVTAVDQSEKELLVPSRLPGQKKKRPVSRRTL
RGDLEERIRRYESGYREGSQPPSDAPRFQGGGASSSGPPERGIG*
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