Gchil9332.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9332.t1
Unique NameGchil9332.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length410
Homology
BLAST of Gchil9332.t1 vs. uniprot
Match: A0A2V3IZQ8_9FLOR (tRNA (Guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZQ8_9FLOR)

HSP 1 Score: 376 bits (966), Expect = 1.650e-125
Identity = 203/372 (54.57%), Postives = 261/372 (70.16%), Query Frame = 0
Query:   47 QLLAVLPGEPVFTQDHALYVGSQELSMQNALAAAVAIPSENRQVLAVATLQKELVILERTDR--DWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEESLNLKN-DDVQDDLRLLGHFSTITDISLTTNFIATADRDNKIRVSRYPSSYVIESFCLSHTQFITALQWTLIPNLLLSAAGDSTIRLWDGVKGKQADCLRLSDLDVIRNTLAD-----VSQPLVVQIAMHPVNVDIAFFVLHSSDAIFALFGLREAKLKGIKLISSFGGKHNVTGLCTCKKGFAYVSVQNEACVMQAPLWSNEGTLCQQLTFTALKHA-SGANENDYCKPKTQGESDLLRFNWLARQKKKEMFHNWKGKKRRHVDI 409
            QLLA  P EPVFT++ +L+VG Q L   NA+AAAVA P +   +LAVATLQKELV+  RT +   W LLCTH LPKRIT+V+ID  F+HV+VSDAVGDVYR P  +S+N+K+ DD Q+  RLLGHFST+T +SLT+N++AT DRDNKIRVSRYP SYVIESFCLSHTQFI+++Q+ +  +LLLSA+GD TIRLW  +KG Q DC+ LS  D I   L+D     V+QPL+V+ A H  N DIA F LH  DA+FA+ GL++A+L  I ++  FG + +++ L TC+    YVSVQ E C+M +   S+     Q L F  +  A SGA          +G  +LL F W+ARQ+KK+M  NWKGKKRRHV+I
Sbjct:   12 QLLAAFPREPVFTRNRSLFVGDQLLPPVNAVAAAVASPGKQHHLLAVATLQKELVVFRRTPQHQQWHLLCTHTLPKRITSVSIDASFTHVVVSDAVGDVYRLPLAQSVNMKSEDDAQEQYRLLGHFSTVTSVSLTSNYVATTDRDNKIRVSRYPLSYVIESFCLSHTQFISSVQY-IERDLLLSASGDGTIRLWHALKGTQLDCVHLSQCDAITRALSDRTDTKVTQPLLVKFAYHGANSDIALFALHKCDALFAVSGLQQARLNQITMLCKFGHQRHISALSTCEDARIYVSVQGEECIMHSEFKSHSAN-GQHLQFGKIAAATSGAVREGQG---VEGARELLHFEWIARQRKKQMVSNWKGKKRRHVEI 378          
BLAST of Gchil9332.t1 vs. uniprot
Match: R7QRR2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRR2_CHOCR)

HSP 1 Score: 157 bits (397), Expect = 6.470e-42
Identity = 87/212 (41.04%), Postives = 127/212 (59.91%), Query Frame = 0
Query:   44 PLTQLLAVLPGEPVFTQDHALYVGSQELSMQNALAAAVAIPSENRQVLAVATLQKELVILER---TDRDWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEESLNLKNDDVQDDLRLLGHFSTITDISLTTNFIATADRDNKIRVSRYPSSYVIESFCLSHTQFITALQWTLIPNLLLSAAGDSTIRLWDGVKGKQADCLRLSD 252
            PL  L A   G  V +    LY+  Q   ++    AAVA   ++  ++ V TLQKE V+L R   TD  WK +  H++PKR T+         V+V+DA GDVY  P   SLNL++D  Q ++ +LGHFST+T ++L  + IA+ADRD K+R+SR+P S+VIESFC++H  FIT +QW +    ++S AGD T+R W+   G   + + + D
Sbjct:   11 PLEVLAAGGDGLVVGSHGGDLYISGQRYDLKRVCGAAVACAKQS--LIVVLTLQKEAVVLSRDVSTD-VWKEVARHLMPKRPTSAVFAIARQQVVVADAFGDVYALPIASSLNLRDDQTQAEVLILGHFSTVTSLALKDSLIASADRDAKLRISRFPDSFVIESFCVAHQDFITCVQW-IGTKRIISGAGDGTLRCWNAADGSLLNTVDIRD 218          
BLAST of Gchil9332.t1 vs. uniprot
Match: A0A2G4SJP7_RHIZD (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Rhizopus microsporus ATCC 52813 TaxID=1340429 RepID=A0A2G4SJP7_RHIZD)

HSP 1 Score: 120 bits (301), Expect = 5.070e-28
Identity = 69/173 (39.88%), Postives = 101/173 (58.38%), Query Frame = 0
Query:   85 SENRQVLAVATLQKELVILERTDRDWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEESLNLKNDDVQDDLRLLGHFSTITDISLTTN--FIATADRDNKIRVSRYPSSYVIESFCLSHTQFITA---LQWTLIPNLLLSAAGDSTIRLWDGVKGKQADCLRLSD 252
            SE+  + A +   K++ + +   +DW L  +    KR+ A+  D   + V+V+D  GDVY  P +E  N K + +      +GH S +TD++LT +  ++ T+DRD  IRVSRYP+ Y IE+FCL HT  +T    L W    NLL+SA GD TIR+W+ V GKQ  CL L +
Sbjct:   61 SEDGSLFAASGENKKICVWD--TKDWSLKLSRPAHKRVNALQFDSKATTVVVADKFGDVYCHPMKEEDNEKLNPI------VGHVSMVTDMALTPDDKYVITSDRDEHIRVSRYPNGYNIETFCLGHTDVVTCVDILPWN--ENLLVSAGGDGTIRVWEYVSGKQIQCLDLKE 223          
BLAST of Gchil9332.t1 vs. uniprot
Match: A0A367KD32_RHIAZ (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=4 Tax=Rhizopus TaxID=4842 RepID=A0A367KD32_RHIAZ)

HSP 1 Score: 118 bits (295), Expect = 4.520e-26
Identity = 64/150 (42.67%), Postives = 88/150 (58.67%), Query Frame = 0
Query:  108 RDWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEESLNLKNDDVQDDLRLLGHFSTITDISLTTN--FIATADRDNKIRVSRYPSSYVIESFCLSHTQFITA---LQWTLIPNLLLSAAGDSTIRLWDGVKGKQADCLRLSD 252
            +DW L  +    KR+ A+  D   + V+V+D  GDVY  P +E     N        ++GH S +TD++LT +  ++ T+DRD  IRVSRYP+ Y IE+FCL HT  +T    L W    NLL+SA GD TIR+W+ V GKQ  CL L +
Sbjct:   82 KDWSLKLSRSAHKRVNALQFDSKATTVVVADKFGDVYCHPMKEDNEKLNP-------IVGHVSMVTDMALTPDDKYVITSDRDEHIRVSRYPNGYNIEAFCLGHTDVVTCVDILPWN--KNLLVSAGGDGTIRVWEYVSGKQIQCLDLKE 222          
BLAST of Gchil9332.t1 vs. uniprot
Match: A0A8H3ZVV6_GIGMA (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=3 Tax=Gigaspora TaxID=4873 RepID=A0A8H3ZVV6_GIGMA)

HSP 1 Score: 117 bits (294), Expect = 1.500e-25
Identity = 69/187 (36.90%), Postives = 109/187 (58.29%), Query Frame = 0
Query:  108 RDWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEESLNLKNDDVQDDLRLLGHFSTITDISLTTN--FIATADRDNKIRVSRYPSSYVIESFCLSHTQFITALQWTLIP---NLLLSAAGDSTIRLWDGVKGKQADCLRLSDLDVIRNTLADVSQPLVVQIAMHPVNVDIAFFVLHSSD 289
            ++W+LL T  +PKR+ ++A     S ++ +D  GDVY +P   + +++N        LLGH S +TD+ LT N  F+ TADRD  IRVS++P  Y I+S+C  HTQF++ L   ++P   +LLLSA GD  I LWD V G+    L + +L  I+N + + ++  +      P + +IA   + SS+
Sbjct:  100 KEWRLLNTRPVPKRVVSIAFSEDGSQIVTADKFGDVYSYPINSTESIEN----TSKLLLGHVSMVTDMVLTPNNKFVITADRDEHIRVSQFPKGYNIKSYCFGHTQFLSKLH--ILPWDSDLLLSAGGDDFIALWDYVPGRLIQTLDIKNL--IQNQVIEANESNIDTTDTVPESKNIAVMSISSSN 278          
BLAST of Gchil9332.t1 vs. uniprot
Match: A0A367KSI6_RHIST (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367KSI6_RHIST)

HSP 1 Score: 115 bits (287), Expect = 5.270e-25
Identity = 68/175 (38.86%), Postives = 107/175 (61.14%), Query Frame = 0
Query:   85 SENRQVLAVATLQKELVILERTDRDWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEESLNLKNDDVQDDLR-LLGHFSTITDISLTTN--FIATADRDNKIRVSRYPSSYVIESFCLSHTQFITALQWTLIP---NLLLSAAGDSTIRLWDGVKGKQADCLRLSDL 253
            +++  +LA +   KE+ + +    DW L  T    KR+ A+  D   + V+++D  GDVY  P EE +N      ++ L+ ++GH S +TD+ LT +  ++ T+DRD  IRVSR+P+ Y IESFCL HT  +T +   LIP   ++L+SA+GD T+RLW+ V G   +CL++ DL
Sbjct:   60 NKDGSLLATSGENKEICVWD--TNDWSLKNTRPAYKRVNALRFDNASTQVVIADKFGDVYCHPIEEIVN------EEKLKPIVGHVSMVTDMLLTPDEKYVITSDRDEHIRVSRFPNGYNIESFCLGHTDVVTCID--LIPWKTDVLVSASGDGTVRLWNFVSG---ECLQVIDL 221          
BLAST of Gchil9332.t1 vs. uniprot
Match: UPI001EE5DD0C (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE5DD0C)

HSP 1 Score: 114 bits (284), Expect = 2.220e-24
Identity = 71/163 (43.56%), Postives = 94/163 (57.67%), Query Frame = 0
Query:   89 QVLAVATLQKELVILERTDRDWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEESLNLKNDDVQDDLRLLGHFSTITDISLTTN--FIATADRDNKIRVSRYPSSYVIESFCLSHTQFITALQWTLIPNLLLSAAGDSTIRLWDGVKGKQADCLR 249
            Q  AV   QK+L  L RT ++W L+ T  + KR  ++A       VI+SD  GDVY FP  E       D Q +L   GH S + D+ LT    ++ T DRD KIRVS +P+SY I SFCL HT FIT L +    ++LLS +GD+TIR W  ++GKQ  C +
Sbjct:   69 QYFAVCDNQKQLH-LYRTGQEWTLVSTRSVVKRGKSLAFTQDEEKVILSDKSGDVYSFPVSEP------DSQGELTH-GHLSMVLDLVLTKGDQYVVTCDRDEKIRVSNFPNSYNIYSFCLGHTDFITCLSYVQEDDILLSGSGDTTIRAWT-LEGKQLSCTK 222          
BLAST of Gchil9332.t1 vs. uniprot
Match: A0A1C7NKR1_9FUNG (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NKR1_9FUNG)

HSP 1 Score: 112 bits (281), Expect = 3.980e-24
Identity = 80/212 (37.74%), Postives = 117/212 (55.19%), Query Frame = 0
Query:   91 LAVATLQKELVILERTDRDWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEESLNLKNDDVQDDLRL---LGHFSTITDISLTTN--FIATADRDNKIRVSRYPSSYVIESFCLSHTQFITALQWTLIP---NLLLSAAGDSTIRLWDGVKGKQADCLRLSDL-----------------DVIRNTLA--DVSQPLVVQIAMHP 275
            LA +   KE+ +   +D  W L  T    KRI A+  +   + ++V+D  GDVY  P +E++    +D ++D +L   +GH S +TD+ LT +  ++ T+DRD  IRVSR+P+ Y IESFCL HT  IT+++  L+P   ++L+SA GD T+RLWD +KG    CL+  DL                 D I NTL+    SQ L V  A  P
Sbjct:   67 LATSGENKEICVWNTSD--WSLNSTRPAYKRINALQFNNDSTQIVVADKFGDVYCHPIKETIK---EDKKEDEKLKPIVGHVSMVTDMLLTPDEKYVITSDRDEHIRVSRFPNGYNIESFCLGHTDVITSIK--LLPWKTDVLVSAGGDGTVRLWDYLKGS---CLQTIDLKEQIEDYKPPAADANSEDAIINTLSFDPASQKLAVAFAKSP 268          
BLAST of Gchil9332.t1 vs. uniprot
Match: UPI001F0386EA (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0386EA)

HSP 1 Score: 112 bits (279), Expect = 5.000e-24
Identity = 70/163 (42.94%), Postives = 97/163 (59.51%), Query Frame = 0
Query:   85 SENRQVLAVATLQKELVILERTDRDWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEESLNLKNDDVQDDLRLLGHFSTITDISLTTN--FIATADRDNKIRVSRYPSSYVIESFCLSHTQFI--TALQWTLIPNLLLSAAGDSTIRLWDGVKGK 243
            S + + LA  +  K+LV+L +TD DW+ +    LPKR TAV        V++SD  GDVY +   E   L N+ +     LLGH S I D+ +T +  +I TADRD KIRVS++P+SY I++FCL HT+F+    L   L   +L+S +GD TIR WD   GK
Sbjct:   67 SNSGKFLAAFSDSKDLVVL-KTD-DWQSVGKRKLPKRPTAVLFTNKEDSVVISDKSGDVYSYHLSEENGLSNEAL-----LLGHVSIILDMVITRDDCYIITADRDEKIRVSKFPNSYNIKTFCLGHTEFVWKIILLSNLSNEILVSVSGDGTIRFWDYKVGK 222          
BLAST of Gchil9332.t1 vs. uniprot
Match: A0A8H7SXS4_9FUNG (tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit TRM82 n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SXS4_9FUNG)

HSP 1 Score: 112 bits (279), Expect = 6.770e-24
Identity = 67/187 (35.83%), Postives = 105/187 (56.15%), Query Frame = 0
Query:   85 SENRQVLAVATLQKELVILERTDRDWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEESLNLKNDDVQDDLRLLGHFSTITDISLTTN--FIATADRDNKIRVSRYPSSYVIESFCLSHTQFITALQWTLIP---NLLLSAAGDSTIRLWDGVKGKQADCLRLSD-LDVIRNTLADVSQ 265
            +++  +LA +   K++ + +   +DW +  T    KRI AV      S ++ +D  GDVY    ++   +     +  L +LGH S +TD+ LT +  F+ T+DRD  IRVSRYP+ Y IE FCL HT  +T +Q  L+P   ++L+S  GD TIRLWD +KG Q   L + + ++  + T AD + 
Sbjct:   60 NKDGSLLATSGENKQICVWD--TQDWSIKNTKPAYKRINAVQFTSDSSEIVAADKFGDVYNHSLKDDTPINE---EKQLPVLGHVSMVTDMVLTPDDKFVITSDRDEHIRVSRYPNGYNIECFCLGHTDVVTCIQ--LLPWNESILVSGGGDGTIRLWDVLKGTQLQTLDVKEQIEAYKPTAADANS 239          
The following BLAST results are available for this feature:
BLAST of Gchil9332.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZQ8_9FLOR1.650e-12554.57tRNA (Guanine-N(7)-)-methyltransferase non-catalyt... [more]
R7QRR2_CHOCR6.470e-4241.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2G4SJP7_RHIZD5.070e-2839.88tRNA (guanine-N(7)-)-methyltransferase non-catalyt... [more]
A0A367KD32_RHIAZ4.520e-2642.67tRNA (guanine-N(7)-)-methyltransferase non-catalyt... [more]
A0A8H3ZVV6_GIGMA1.500e-2536.90tRNA (guanine-N(7)-)-methyltransferase non-catalyt... [more]
A0A367KSI6_RHIST5.270e-2538.86tRNA (guanine-N(7)-)-methyltransferase non-catalyt... [more]
UPI001EE5DD0C2.220e-2443.56tRNA (guanine-N(7)-)-methyltransferase non-catalyt... [more]
A0A1C7NKR1_9FUNG3.980e-2437.74tRNA (guanine-N(7)-)-methyltransferase non-catalyt... [more]
UPI001F0386EA5.000e-2442.94tRNA (guanine-N(7)-)-methyltransferase non-catalyt... [more]
A0A8H7SXS4_9FUNG6.770e-2435.83tRNA (guanine-N(7)-)-methyltransferase non-catalyt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 158..195
e-value: 11.0
score: 10.4
coord: 198..238
e-value: 0.0025
score: 27.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 208..238
e-value: 0.013
score: 16.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 206..238
score: 11.510997
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 59..377
e-value: 3.3E-14
score: 54.7
IPR028884tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunitPANTHERPTHR16288WD40 REPEAT PROTEIN 4coord: 84..294
IPR028884tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunitHAMAPMF_03056TRM82coord: 46..405
score: 18.872766
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 206..238
score: 9.625601
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 85..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3170422..3171840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9332.t1Gchil9332.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3170422..3171840 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9332.t1 ID=Gchil9332.t1|Name=Gchil9332.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=410bp
MLALQNERLLAVEGKRRRSAVRPCIGCEMSDDRATIEAVLRSTPLTQLLA
VLPGEPVFTQDHALYVGSQELSMQNALAAAVAIPSENRQVLAVATLQKEL
VILERTDRDWKLLCTHILPKRITAVAIDGLFSHVIVSDAVGDVYRFPYEE
SLNLKNDDVQDDLRLLGHFSTITDISLTTNFIATADRDNKIRVSRYPSSY
VIESFCLSHTQFITALQWTLIPNLLLSAAGDSTIRLWDGVKGKQADCLRL
SDLDVIRNTLADVSQPLVVQIAMHPVNVDIAFFVLHSSDAIFALFGLREA
KLKGIKLISSFGGKHNVTGLCTCKKGFAYVSVQNEACVMQAPLWSNEGTL
CQQLTFTALKHASGANENDYCKPKTQGESDLLRFNWLARQKKKEMFHNWK
GKKRRHVDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR028884Trm82
IPR036322WD40_repeat_dom_sf