Gchil9330.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9330.t1
Unique NameGchil9330.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length302
Homology
BLAST of Gchil9330.t1 vs. uniprot
Match: A0A2V3IYB8_9FLOR (Poly(A)-specific ribonuclease n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYB8_9FLOR)

HSP 1 Score: 462 bits (1189), Expect = 2.650e-162
Identity = 230/302 (76.16%), Postives = 259/302 (85.76%), Query Frame = 0
Query:    1 MARTSKIRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQALRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSNDMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWICFSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRLHGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSKCGILYNLGTAAKNSGDHGPASASPVYTTPRKALPGPEGSNGNGEGTA-LPSPA 301
            MAR  +IRQVWASNLE+EIL L ELS+ Y +IAMDTEFPGVVLRPIG QA  PDA Y THRLN DLLKIIQLG+S +TEDGKQP+ECTTWQFNFSFSLS+DMYAQDSIELLSASGIDFAEHERNGIDVL FGELI SSGLVLNPR+TW+ FSGGYDFCYLIK+LTA+PLP QE  FFEYL LFFP +YDLKYLMLS+DRL+GGLNKV E LGCER+G MHQAGSDSLLTLDV+ KM+EQVF+G ID SK G+LY LG   K+S  + P S+SP +T PRKA+ G +GSNG+G GT+ L SP+
Sbjct:    1 MARVPRIRQVWASNLEEEILLLCELSETYTHIAMDTEFPGVVLRPIGQQATTPDAAYCTHRLNADLLKIIQLGISLATEDGKQPEECTTWQFNFSFSLSSDMYAQDSIELLSASGIDFAEHERNGIDVLTFGELIISSGLVLNPRITWVTFSGGYDFCYLIKVLTAIPLPEQEAEFFEYLHLFFPCLYDLKYLMLSTDRLYGGLNKVAETLGCERIGNMHQAGSDSLLTLDVYFKMREQVFNGVIDASKNGVLYTLGMGMKDSVGNLPPSSSPTFT-PRKAIAGTDGSNGSGNGTSTLASPS 301          
BLAST of Gchil9330.t1 vs. uniprot
Match: M2W4R8_GALSU (Poly(A)-specific ribonuclease n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4R8_GALSU)

HSP 1 Score: 328 bits (841), Expect = 2.450e-109
Identity = 158/255 (61.96%), Postives = 196/255 (76.86%), Query Frame = 0
Query:    7 IRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQALRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSNDMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWICFSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRLHGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSK-CGILYNLGTAA 260
            I++VWA NLE+E+  +S + D YN++AMDTEFPGVV RPIGS     D  Y T R NVDLLKIIQLG+S S  +G  P+ C  WQFNF FSL+ D+YAQDSI+LL+ SGIDF EHER+GIDV  FGEL+ SSG+VLN  + WI F  GYDF YL+K+LT   +P +E+ FFE L+ +FPR YD+KYLM++SDRL+GGLNK+ E+L  ERVG MHQAGSDSLLT+ VF KMKE +F G ID+ + CG+LY LG+AA
Sbjct:   11 IKEVWAENLEKELANISSILDKYNFVAMDTEFPGVVARPIGSFRSNTDYHYQTLRCNVDLLKIIQLGLSFSDSEGNIPEGCACWQFNFRFSLNEDIYAQDSIDLLTRSGIDFDEHERHGIDVERFGELLISSGIVLNEDICWISFHSGYDFGYLLKILTCSEMPAEESEFFELLNTYFPRFYDMKYLMMASDRLYGGLNKLAEILEVERVGQMHQAGSDSLLTMKVFFKMKESIFSGQIDERRYCGVLYGLGSAA 265          
BLAST of Gchil9330.t1 vs. uniprot
Match: UPI001E1D4D66 (CCR4-NOT transcription complex subunit 7-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D4D66)

HSP 1 Score: 311 bits (798), Expect = 2.870e-103
Identity = 158/255 (61.96%), Postives = 188/255 (73.73%), Query Frame = 0
Query:    6 KIRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQALRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSNDMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWICFSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRLHGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSKCGILYNLGTAA 260
            +I  VWA NL  E+ ++  L+D YN++A+DTEFPGVV+RP+G+ A   D  Y T R NVDLL+IIQLG+S S  DG+ P E   WQFNF FSL  DMYAQDSIELL+ SGI+FAEHERNGI    F EL+TSSGLVLN  + WI F GGYDF YL+K+LTA  LP  E+ FFE L L+FP+ YD+KYLM S + L GGLNK+ E  GCERVG MHQAGSDSLLTL VF +M  + F GAID+S  GILY LG A+
Sbjct:    4 RIVDVWAHNLAAEMDRICALADTYNHVALDTEFPGVVVRPVGA-AQAVDIHYQTLRCNVDLLRIIQLGISLSNADGEGPSEVACWQFNFEFSLEQDMYAQDSIELLTKSGINFAEHERNGIAPNDFAELLTSSGLVLNDGMKWISFHGGYDFGYLLKVLTASDLPTAESEFFELLELYFPQKYDMKYLMRSRENLFGGLNKLAETYGCERVGSMHQAGSDSLLTLHVFFRMMRETFGGAIDESLEGILYGLGVAS 257          
BLAST of Gchil9330.t1 vs. uniprot
Match: A0A1X6NJJ6_PORUM (Poly(A)-specific ribonuclease (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJJ6_PORUM)

HSP 1 Score: 312 bits (799), Expect = 8.550e-103
Identity = 156/294 (53.06%), Postives = 210/294 (71.43%), Query Frame = 0
Query:    7 IRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQALRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSNDMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWICFSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRLHGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSKCGILYNLGTAAKNSGDHGPASASPVYTTPRKALPGPEGSNGNGEGTALPSP 300
            IR+VWA NL +E+  +SE+ + YN+IA+DTEFPGVV RP+G  A   D  Y T R+NVDLLKIIQLG++ S E+G  P++   WQFNF FSL++D+YA D+IELL+ +GIDF++HER+GIDV  FGEL+TSSG+VLN  VTW+ F  G+DF YL+K+LT+ PLP  E+ F + L+ +FPR+YD+KYLML+SD+L+GGLNK+ E+   +R G MHQAGSDSL+TL VFL+MKE+ F GA+     GIL+ +G+A+         S  P      + L      NG G+G +  SP
Sbjct:    6 IREVWAGNLAEEMEAISEVVERYNHIALDTEFPGVVARPVG--AAGSDYQYQTLRVNVDLLKIIQLGLTFSDEEGNMPEDVQCWQFNFHFSLASDIYAADAIELLTQAGIDFSQHERHGIDVAEFGELLTSSGVVLNEDVTWVSFHSGFDFGYLLKVLTSCPLPAAESDFLDLLATYFPRVYDMKYLMLASDKLYGGLNKLAEIYHVDRTGSMHQAGSDSLVTLHVFLRMKEETFRGAVPVPLVGILFGIGSAS---------STLPGRLLNGQRLSAAAAENGGGDGESTASP 288          
BLAST of Gchil9330.t1 vs. uniprot
Match: L8GRD9_ACACA (Poly(A)-specific ribonuclease n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRD9_ACACA)

HSP 1 Score: 290 bits (741), Expect = 1.310e-94
Identity = 146/260 (56.15%), Postives = 181/260 (69.62%), Query Frame = 0
Query:    6 KIRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQALRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSNDMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWICFSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRLHGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSK-CGILYNLGTAAKNSG 264
            +IR+VWA NLE+E+  + ++ + Y YIAMDTEFPG+V RPIG+     +  Y T R NVDLLKIIQLG++ +  +G+ P    TWQFNF FSL+ DMYAQDSI+LL+ SGI+F  HE +G+DV  FGEL+TSSG+VL+ R+ WI F  GYDF YL+K+LT  PLP QE  FFE L  +FP IYD+KYLM S   L GGLN++   L  ER+G  HQAGSDSLLT   F KMK   F   +DDSK  G+LY LG   K  G
Sbjct:   11 EIREVWAENLEEEMAHIRDIVEDYPYIAMDTEFPGIVARPIGNFKSPSEYHYQTLRCNVDLLKIIQLGLTFTDGEGRLPPGVATWQFNFKFSLTEDMYAQDSIDLLTRSGINFKRHEEHGVDVSHFGELLTSSGIVLDDRIKWISFHSGYDFGYLLKILTCKPLPAQEEEFFELLLAYFPCIYDIKYLMKSCKSLKGGLNELANDLEVERIGPQHQAGSDSLLTSATFFKMKRMFFENNLDDSKFLGVLYGLGHPYKAGG 270          
BLAST of Gchil9330.t1 vs. uniprot
Match: F4Q733_CAVFA (Poly(A)-specific ribonuclease n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q733_CAVFA)

HSP 1 Score: 293 bits (749), Expect = 5.140e-94
Identity = 147/254 (57.87%), Postives = 181/254 (71.26%), Query Frame = 0
Query:    4 TSKIRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQALRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSNDMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWICFSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRLHGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSKC-GILYNL 256
            T +IR+VWA NLE+E+  + EL D YNYIAMDTEFPG+V RP+GS     D  Y T RLNVDLLKIIQLG++ S  DG       TWQFNF F+L+ DMYAQDSI+LLS SGI+F ++E NGIDVL FG+L+ SSG+VLN ++ WI F  GYDF YLIK+LT   LP +E  FF+ +  +FP IYD+KYLM S   L GGL+++ E L  +R+G  HQAGSDSLLT   F K+++  F   IDDSK  GILY L
Sbjct:   11 TDEIREVWAHNLEEEMALIRELVDDYNYIAMDTEFPGIVTRPVGSFRTPSDYHYQTLRLNVDLLKIIQLGLTFSDSDGNLASNTCTWQFNFKFNLNEDMYAQDSIDLLSRSGIEFKKNEENGIDVLDFGDLLMSSGIVLNEKIKWISFHSGYDFGYLIKVLTCTALPQEEPEFFDLVRTYFPCIYDIKYLMKSCKNLKGGLSELAEDLDIKRIGPQHQAGSDSLLTCTTFFKLRKMYFENQIDDSKYQGILYGL 264          
BLAST of Gchil9330.t1 vs. uniprot
Match: A0A5J4YRQ4_PORPP (Poly(A)-specific ribonuclease n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRQ4_PORPP)

HSP 1 Score: 289 bits (739), Expect = 7.070e-94
Identity = 141/253 (55.73%), Postives = 183/253 (72.33%), Query Frame = 0
Query:    6 KIRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQALRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSNDMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWICFSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRLHGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSKCGILYNLGT 258
            +IR VW SNLE+E++ +S + + Y+++AMDTEFPGVV RP+G      D  Y T R NVDLLKIIQLG++ + EDG   ++C  WQFNF FSL +DMYAQDSI+LL+ SGIDF + ER+GIDVL FGEL+  SGLVLN  VTWI F   +DF YLIK+LT   LP  E+ FFE + L+FPR++D+KYL+  +DR +GGL+K+ E+   +R G MHQAGSDSLLTL+VF +++   F G +      ILY LGT
Sbjct:    4 QIRDVWESNLEEEMMVISGVLEKYSHVAMDTEFPGVVARPVGGFRNSSDYQYQTLRCNVDLLKIIQLGLAFADEDGNLAEDCPCWQFNFKFSLQDDMYAQDSIDLLTQSGIDFEQFERDGIDVLHFGELLIGSGLVLNDNVTWISFHSSFDFGYLIKVLTCSNLPSDESEFFELMQLYFPRLWDMKYLL--TDRFYGGLSKLAEVYEVKRYGKMHQAGSDSLLTLEVFFRVRASTFQGHVHKDMMNILYGLGT 254          
BLAST of Gchil9330.t1 vs. uniprot
Match: A0A835Z498_9STRA (Poly(A)-specific ribonuclease n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z498_9STRA)

HSP 1 Score: 290 bits (742), Expect = 1.600e-93
Identity = 154/283 (54.42%), Postives = 187/283 (66.08%), Query Frame = 0
Query:    6 KIRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQALRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSNDMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWICFSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRLHGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSKCGILYNLGTAAKNSGDHGPASASPVY-------TTPRKA 281
            +IR VW  NLE+E+ K+ E+ + Y Y+AMDTEFPGVV RPIG    + D  Y T R NVDLLKIIQLG+S + E G+  + C  WQFNF FSL  DMYAQDSI+LL  SGI+F +HE  GIDVL FGEL+ +SGLVL   VTW+ F  GYDF YL+K+LT+  LPGQE  FF  L L+FPR+YD+KYLM S D  HGGLNK+G+ L  ER+G  HQAGSDSLLT  VF K+ E  F+G         + NL     NS   G  + + VY       +TP KA
Sbjct:   33 EIRNVWVDNLEEEMAKIREVVETYPYVAMDTEFPGVVARPIGDFG-QSDYQYQTLRCNVDLLKIIQLGLSFANEKGEFAEGCCCWQFNFKFSLGEDMYAQDSIDLLKQSGINFDQHEARGIDVLEFGELLMTSGLVLVDNVTWVSFHSGYDFGYLLKVLTSCALPGQEKEFFHLLKLYFPRLYDIKYLMASQDGFHGGLNKLGDDLSVERIGQKHQAGSDSLLTAQVFFKIVETKFNG---------MSNLSREKYNSELFGYGNNNTVYRPGQNVTSTPTKA 305          
BLAST of Gchil9330.t1 vs. uniprot
Match: A0A4Y2DT92_ARAVE (CCR4-NOT transcription complex subunit 7 n=4 Tax=Entelegynae TaxID=74971 RepID=A0A4Y2DT92_ARAVE)

HSP 1 Score: 287 bits (734), Expect = 3.430e-93
Identity = 148/272 (54.41%), Postives = 184/272 (67.65%), Query Frame = 0
Query:    7 IRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQALRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSNDMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWICFSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRLHGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSK-CGILYNLGTAAKNSGDHGPASASPVYTT 277
            IR VWA N+E+E   + ++   Y +IAMDTEFPGVV RPIG      D  Y   R NVDLLKIIQLG++   E+GK P   TTWQFNF F+L+ DMYAQDSI+LL++SGI F +H+ +GID   F EL+ +SG+VL+  + WI F  GYDF YL+KLLT   LP +E+ FFE L ++FP IYD+KYLM S   L GGL +V E L  ER+G  HQAGSDSLLT   F KM+E  F   IDD+K CG LY LGT+   +G+     ASP+ TT
Sbjct:   26 IRDVWAHNMEEEFKIIRQIVQQYKFIAMDTEFPGVVARPIGEFRSTADYQYQLLRCNVDLLKIIQLGLTFLDENGKSPPGFTTWQFNFKFNLTEDMYAQDSIDLLTSSGIQFKKHDEDGIDPYEFAELLMTSGVVLSENINWISFHSGYDFGYLLKLLTDQNLPAEESEFFELLRIYFPTIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGATFFKMREMFFEDNIDDAKYCGHLYGLGTSYVMNGNATLEEASPIPTT 297          
BLAST of Gchil9330.t1 vs. uniprot
Match: A7SGF4_NEMVE (CCR4-NOT transcription complex subunit 7 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SGF4_NEMVE)

HSP 1 Score: 285 bits (729), Expect = 9.190e-93
Identity = 148/267 (55.43%), Postives = 179/267 (67.04%), Query Frame = 0
Query:    7 IRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQALRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSNDMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWICFSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRLHGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSK-CGILYNLGTAAKNSGD--HGPAS 270
            IR VW  NLE+E  K+  + D Y Y+AMDTEFPGVV RPIG      +  +   R NVDLLKIIQLG+S   + G+QP +  TWQFNF F+L+ DMYAQDSI+LL+ SGI F +HE  GIDV  F EL+ +SGLVL   V W+ F   YDF YLIK+LTA  L  +E+ FFE L L+FP+IYD+KYLM S   L GGL +V E+L  ER+G  HQAGSD LLT + F KM+E  F   IDD K CG LY LGT+  N G    GPA+
Sbjct:    9 IRDVWQGNLEEEFAKIRNIIDEYPYVAMDTEFPGVVARPIGEFRSTAEYQFQLLRCNVDLLKIIQLGMSFYNDHGQQPSDGATWQFNFKFNLTEDMYAQDSIDLLNRSGIQFKQHEEEGIDVNDFAELLITSGLVLRDEVRWLSFHSAYDFGYLIKVLTAQNLSSEESEFFELLKLYFPKIYDVKYLMKSCKSLKGGLQEVSELLDLERIGPQHQAGSDCLLTGNAFFKMRELFFEDNIDDDKYCGHLYGLGTSFVNGGQAYSGPAT 275          
The following BLAST results are available for this feature:
BLAST of Gchil9330.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYB8_9FLOR2.650e-16276.16Poly(A)-specific ribonuclease n=1 Tax=Gracilariops... [more]
M2W4R8_GALSU2.450e-10961.96Poly(A)-specific ribonuclease n=1 Tax=Galdieria su... [more]
UPI001E1D4D662.870e-10361.96CCR4-NOT transcription complex subunit 7-like n=1 ... [more]
A0A1X6NJJ6_PORUM8.550e-10353.06Poly(A)-specific ribonuclease (Fragment) n=1 Tax=P... [more]
L8GRD9_ACACA1.310e-9456.15Poly(A)-specific ribonuclease n=1 Tax=Acanthamoeba... [more]
F4Q733_CAVFA5.140e-9457.87Poly(A)-specific ribonuclease n=1 Tax=Cavenderia f... [more]
A0A5J4YRQ4_PORPP7.070e-9455.73Poly(A)-specific ribonuclease n=1 Tax=Porphyridium... [more]
A0A835Z498_9STRA1.600e-9354.42Poly(A)-specific ribonuclease n=1 Tax=Tribonema mi... [more]
A0A4Y2DT92_ARAVE3.430e-9354.41CCR4-NOT transcription complex subunit 7 n=4 Tax=E... [more]
A7SGF4_NEMVE9.190e-9355.43CCR4-NOT transcription complex subunit 7 n=1 Tax=N... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 10..126
e-value: 6.6E-9
score: 35.5
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 6..256
e-value: 1.3E-85
score: 288.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..301
NoneNo IPR availablePANTHERPTHR10797:SF0POP2, ISOFORM Ecoord: 4..261
IPR039637CCR4-NOT transcription complex subunit 7/8/Pop2PANTHERPTHR10797CCR4-NOT TRANSCRIPTION COMPLEX SUBUNITcoord: 4..261
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 7..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:3101552..3102457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9330.t1Gchil9330.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 3101552..3102457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9330.t1 ID=Gchil9330.t1|Name=Gchil9330.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=302bp
MARTSKIRQVWASNLEQEILKLSELSDVYNYIAMDTEFPGVVLRPIGSQA
LRPDALYSTHRLNVDLLKIIQLGVSPSTEDGKQPDECTTWQFNFSFSLSN
DMYAQDSIELLSASGIDFAEHERNGIDVLCFGELITSSGLVLNPRVTWIC
FSGGYDFCYLIKLLTAVPLPGQETGFFEYLSLFFPRIYDLKYLMLSSDRL
HGGLNKVGEMLGCERVGMMHQAGSDSLLTLDVFLKMKEQVFHGAIDDSKC
GILYNLGTAAKNSGDHGPASASPVYTTPRKALPGPEGSNGNGEGTALPSP
A*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006941RNase_CAF1
IPR036397RNaseH_sf
IPR039637CNOT7/CNOT8/Pop2
IPR012337RNaseH-like_sf