Gchil933.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil933.t1
Unique Name	Gchil933.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	528

Homology

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BLAST of Gchil933.t1 vs. uniprot
Match: A0A2V3II95_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II95_9FLOR)

HSP 1 Score: 580 bits (1494), Expect = 1.090e-201
Identity = 303/508 (59.65%), Postives = 373/508 (73.43%), Query Frame = 0

Query:    1 MTLNLREIERGIGIDLLRRPVLTATVNAFLLRLFVEAFLQPTDEDDQDAHSTAYKHQDDVGCADSALSEKLAASAIFLLTQLVQLIGLAESAVWAVLAVVYKAIKLPRVYGFEKLVLDLLVLLAKPSVYYVKKTLRFQCRPGQKVPHLQLTRSGYGRMVITVVSSTESLTRDTRALLQMLRYVNYSTVAFWTEDSVVMVGVNKPVERALCHLGSEPIRIDLGWHKDVVEGTNFKIEAVFTKEHLRVVESGIQSVGRRAVIVELCAELRTTNLELLVKSMGQFAAVCEAYERGLRLFNGKRVTIYVVGLALCVALIVFYDGLPGLLQPSVDVLPLAIGAFTLWMTLGKSAALGETEEETIFTPHTSENVLLAYHGLARIEPHVRNVCWVPEVHREPQAPDVADGGDDGGEGDGGVDFDYDEQHDKPYELRRRRSGVDGSLSVLEAAVCLSIFEHYGNFVKWKGSRLRIDLYHVRAGPTVGLAHIVGVQRIRSLAAMRLHEHAPLVRHLG 508
            M L L EIERGIGIDLLRRPVL A +NAFLL+LF +AFL   DE+++     A K     G A S L+EKLAA++IF L  L+ L+G AES  WA++A+V+K +KLPRVY  EKL+LDL V+  KPSV YVKKT+RFQCRPGQK+P LQ TR G+G  VIT+VSS ES+TRDT ALL MLRY+NY T A+WT+DSV+++G+N+ +ERALC+L SEP  IDLGWHKDV+E TN K+EAVFTKE+LR V+SGIQSVGRRAV+VE+ AE  T NLE LVKSM Q+AAVCEA+ERG+RLFNGKR++IY VGL + +ALIVFY+GL GLL+PS DVL LA+GA+TLWMT+GKSAALGETEE T  + +  ENVLLAYHGLA IE +V N+CWVPEVHR+                           H+ P +       VDGS+SVLEA + L+IFEH+G+FVKWKG RL++D   V AG   G+AHIV V R+  L  +   +    V+ LG
Sbjct:    1 MALRLHEIERGIGIDLLRRPVLVAFLNAFLLQLFADAFLHHDDEEEEKVKYEAPK----AGWAKSPLTEKLAATSIFFLAHLLMLVGFAESVGWALIAIVFKVLKLPRVYVLEKLLLDLRVMFLKPSVRYVKKTIRFQCRPGQKIPRLQTTRRGFGVFVITIVSSVESITRDTAALLHMLRYMNYPTYAYWTDDSVLLIGINRNIERALCNLASEPAVIDLGWHKDVIESTNLKVEAVFTKENLRRVDSGIQSVGRRAVVVEIAAEFTTLNLETLVKSMSQYAAVCEAHERGIRLFNGKRLSIYAVGLFVSLALIVFYEGLGGLLKPSADVLTLAVGAYTLWMTVGKSAALGETEERTSLSTYNRENVLLAYHGLAHIEENVINICWVPEVHRD--------------------------DHESPLDAE----AVDGSISVLEAGIFLNIFEHFGHFVKWKGPRLQLDRMKVVAGDDPGVAHIVSVDRMAHLNMLGYQKGETFVKRLG 474

The following BLAST results are available for this feature:

BLAST of Gchil933.t1 vs. uniprot

BLAST of Gchil933.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3II95_9FLOR	1.090e-201	59.65	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 397..419
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 346..527
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 40..74
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 301..318
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..39
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 102..300
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 324..345
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 319..323
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 75..101
None	No IPR available	TMHMM	TMhelix		coord: 301..318

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000017_pilon	contig	tig00000017_pilon:1725769..1727352 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil933.t1	Gchil933.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000017_pilon 1725769..1727352 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil933.t1 ID=Gchil933.t1|Name=Gchil933.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=528bp
MTLNLREIERGIGIDLLRRPVLTATVNAFLLRLFVEAFLQPTDEDDQDAH
STAYKHQDDVGCADSALSEKLAASAIFLLTQLVQLIGLAESAVWAVLAVV
YKAIKLPRVYGFEKLVLDLLVLLAKPSVYYVKKTLRFQCRPGQKVPHLQL
TRSGYGRMVITVVSSTESLTRDTRALLQMLRYVNYSTVAFWTEDSVVMVG
VNKPVERALCHLGSEPIRIDLGWHKDVVEGTNFKIEAVFTKEHLRVVESG
IQSVGRRAVIVELCAELRTTNLELLVKSMGQFAAVCEAYERGLRLFNGKR
VTIYVVGLALCVALIVFYDGLPGLLQPSVDVLPLAIGAFTLWMTLGKSAA
LGETEEETIFTPHTSENVLLAYHGLARIEPHVRNVCWVPEVHREPQAPDV
ADGGDDGGEGDGGVDFDYDEQHDKPYELRRRRSGVDGSLSVLEAAVCLSI
FEHYGNFVKWKGSRLRIDLYHVRAGPTVGLAHIVGVQRIRSLAAMRLHEH
APLVRHLGAPAPAHPALPLDHVADAAV*