Gchil931.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil931.t1
Unique NameGchil931.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length286
Homology
BLAST of Gchil931.t1 vs. uniprot
Match: A0A2V3IQ26_9FLOR (Matrilin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ26_9FLOR)

HSP 1 Score: 362 bits (929), Expect = 8.160e-122
Identity = 178/274 (64.96%), Postives = 209/274 (76.28%), Query Frame = 0
Query:   11 QAFAPGSSLSAVGFSSVSGLVQSPTTNINGVFIPAIESNPQSEGFTSSGSGLLLCESLISSADDPRIIVLLTDGIDNTAPLGSAVAPGIKSDGITIATVGIGDGININGLQSIASSPDLFTFADSFDTLITKVEEIVEGLCPEPECANIDCAKCGQILECYVNSGFPNLDQTVCNVVTDRSQFCTTRRGDGTSCLQQCKGPYGVECYAGESFGSCPVMIGSNPKCKGGAARNRPAGLSNFASYTVCVPAEGSAEVSCLNAKCESGSSCSCAQSF 284
              FAPGS+LSAVGFSS + L+QSPTT+ING F+ AI+ N Q  G TSSG+ L LC++ I+SA DPRIIVLLTDG DNT P G++VA GIK++GI I T+GIG GIN   L+SIASSPDLF F D F +    +E IV+ +CP PEC N DCAKCGQ+LECYVNSGF + D+ VC+VV D SQFCTTRRGDGT+C QQCKG  GV+C+ G SFGSCP  IGS+ KC GGA + R A LSNFASYTVC+   G  EVSCL+ KCESGS CSCA  F
Sbjct:  109 STFAPGSTLSAVGFSSFAELIQSPTTDINGEFVQAIQGNSQLGGTTSSGAALQLCQTQIASAADPRIIVLLTDGADNTMPFGTSVAGGIKNNGIIIITIGIGSGINAPSLRSIASSPDLFIFVDDFSSFEDSIEVIVDTICPVPECVNFDCAKCGQVLECYVNSGFVSADEAVCDVVNDASQFCTTRRGDGTACQQQCKGRQGVQCFPGTSFGSCPQRIGSDAKCMGGAGKGRRADLSNFASYTVCISRNGRVEVSCLSQKCESGSHCSCASPF 382          
BLAST of Gchil931.t1 vs. uniprot
Match: Q7XZ43_GRIJA (Alpha 1 type VII collagen (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ43_GRIJA)

HSP 1 Score: 112 bits (281), Expect = 8.650e-27
Identity = 63/138 (45.65%), Postives = 88/138 (63.77%), Query Frame = 0
Query:    8 NCSQAFAPGSSLSAVGFSSVS-----GLVQSPTTNINGVFIPAIESNPQSEGFTSSGSGLLLCESLISSADDPRIIVLLTDGIDNTAPLGSAVAPGIKSDGITIATVGIGDGININGLQ-SIASSPDLFTFADSFDTL 139
            N     APGSS +AV FS +      G V SP T+    F+ A+ +NP+  GFTSSG+GL LC+  +     P++I+L+TDG+DN  P+G  V   IK++G T+A VGIGD +N + L+ +I+SSPDL+TF D F  L
Sbjct:   57 NTFSTAAPGSSFAAVDFSGLQNGGGVGEVVSPLTSDVTTFLAALAANPKRGGFTSSGTGLNLCDQELDGQAQPKVILLITDGVDNRNPIGVDVEAAIKANGNTVAVVGIGDNLNDDDLRDTISSSPDLYTFVDDFSAL 194          
BLAST of Gchil931.t1 vs. uniprot
Match: A0A2V3J5W6_9FLOR (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR)

HSP 1 Score: 91.3 bits (225), Expect = 4.690e-17
Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 0
Query:   16 GSSLSAVGFSSVSGLVQSPTTNINGVFIPAIESNPQSEGFTSSGSGLLLCESLISSADDPRIIVLLTDGIDNTAPLGSAVAPGIKSDGITIATVGIGDGININGLQSIASSPDLFTFADSFDTLITKVEEIVEGLC------PEP 154
            G+  SA GFS+    +Q+ T+ +  +F+PA+ ++    G T+  +GL  C + I+     ++I+LLTDG DN  PL S++AP IK  GITI TVGIG G++   L+ +AS+PD F     F TL ++V  + +  C      PEP
Sbjct:   72 GTLFSAYGFSNSVTTIQTSTSQLETLFVPAVTASGPPSGSTNMYAGLNGCFNDIADQPGNKVIILLTDGQDNAFPLASSLAPVIKDAGITIVTVGIGAGVSAPYLEQLASTPDFFIQL-MFSTLPSEVVSLSQMTCDAVDASPEP 215          
BLAST of Gchil931.t1 vs. uniprot
Match: A0A2V3IZ36_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ36_9FLOR)

HSP 1 Score: 61.6 bits (148), Expect = 4.820e-8
Identity = 38/103 (36.89%), Postives = 56/103 (54.37%), Query Frame = 0
Query:   54 GFTSSGSGLLLCESLISSADDPRIIVLLTDGIDNTAPLGSAVAPGIKSDGITIATVGIGDGININGLQSIASSP-DLFTFADSFDTLITKVEEIVEGLCPEPE 155
            G T+  +GL  C   + +    R I+LLTDG       G+ +A  IKS+GI+I T+GIG  +N + L+ IAS P + F  +  F+ L  KV E+    C  P+
Sbjct:   14 GGTNIQAGLTACYEQVRNGKGSRSIILLTDG----QSFGAPIANQIKSEGISIVTIGIGKNVNADYLKDIASDPAEDFYISAEFEKLGQKVAEVAATTCVLPD 112          
BLAST of Gchil931.t1 vs. uniprot
Match: A0A496VAS4_9GAMM (VWFA domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496VAS4_9GAMM)

HSP 1 Score: 59.3 bits (142), Expect = 2.870e-6
Identity = 41/133 (30.83%), Postives = 70/133 (52.63%), Query Frame = 0
Query:   18 SLSAVGFSSVSGLVQSPTTNINGVFIPAIESNPQSEGFTSSGSGLLLCESLISSADDPRIIVLLTDGIDNTAPLGSAVAPGIKSDGITIATVGIGDGININGLQSIASSPDLFTFADSFDTLITKVEEIVEGL 150
            S+  + F S + ++ +PT +   +   AIE     +G T+   G+ +  S + S DDPR ++LLTDG  N A      A  + +DGI + T+G G G + N L+ +A S +   FA +  T+++   +I + L
Sbjct:  545 SIGLIEFGSDAKMISAPTQSAKHIN-RAIEQL-SIQGSTNMADGIKIAHSELKSVDDPRFVILLTDGYPNNANAAKKAAKAVCADGIELITIGTG-GADENYLKELACSDENSIFAQA-GTVVSAFSKIAQVL 673          
BLAST of Gchil931.t1 vs. uniprot
Match: A0A6P8IK63_ACTTE (macrophage mannose receptor 1-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IK63_ACTTE)

HSP 1 Score: 57.8 bits (138), Expect = 8.770e-6
Identity = 31/91 (34.07%), Postives = 54/91 (59.34%), Query Frame = 0
Query:   63 LLCESLISSADDPRIIVLLTDGIDNTAPLGSAVAPGIKSDGITIATVGIGDGININGLQSIASSPDLFTFADSFDTLITKVEEIVEGLCPE 153
            L  ++  S  D PRI +++TDG  ++    S  A  +K+ G+TI T+GIG+G++   L  +++S D   + +S+  L  +V+EI E +C E
Sbjct:  417 LFSQTAGSRMDVPRIALVMTDGKSDSFRRTSQAAAKLKTMGVTIVTLGIGNGVDRKELIDMSTSEDYVLYVESYAALSKRVKEIRERVCDE 507          
The following BLAST results are available for this feature:
BLAST of Gchil931.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IQ26_9FLOR8.160e-12264.96Matrilin-2 n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
Q7XZ43_GRIJA8.650e-2745.65Alpha 1 type VII collagen (Fragment) n=1 Tax=Griff... [more]
A0A2V3J5W6_9FLOR4.690e-1738.62Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
A0A2V3IZ36_9FLOR4.820e-836.89VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A496VAS4_9GAMM2.870e-630.83VWFA domain-containing protein n=1 Tax=Gammaproteo... [more]
A0A6P8IK63_ACTTE8.770e-634.07macrophage mannose receptor 1-like n=1 Tax=Actinia... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 19..138
e-value: 5.5E-10
score: 39.8
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 75..150
score: 10.79879
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 6..157
e-value: 7.8E-20
score: 73.6
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 15..153
NoneNo IPR availableCDDcd00198vWFAcoord: 15..132
e-value: 1.26156E-11
score: 59.887

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:1667721..1668578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil931.t1Gchil931.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 1667721..1668578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil931.t1 ID=Gchil931.t1|Name=Gchil931.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=286bp
MPWLKSLNCSQAFAPGSSLSAVGFSSVSGLVQSPTTNINGVFIPAIESNP
QSEGFTSSGSGLLLCESLISSADDPRIIVLLTDGIDNTAPLGSAVAPGIK
SDGITIATVGIGDGININGLQSIASSPDLFTFADSFDTLITKVEEIVEGL
CPEPECANIDCAKCGQILECYVNSGFPNLDQTVCNVVTDRSQFCTTRRGD
GTSCLQQCKGPYGVECYAGESFGSCPVMIGSNPKCKGGAARNRPAGLSNF
ASYTVCVPAEGSAEVSCLNAKCESGSSCSCAQSFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf