Gchil9255.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9255.t1
Unique NameGchil9255.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length451
Homology
BLAST of Gchil9255.t1 vs. uniprot
Match: A0A2V3ITE3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITE3_9FLOR)

HSP 1 Score: 476 bits (1226), Expect = 2.150e-163
Identity = 263/463 (56.80%), Postives = 325/463 (70.19%), Query Frame = 0
Query:    9 HLRFDSVFSDDDDLTQLSIVDVTPRHSLVL----APSHSESTALSTSTSSHYTSKPSIDIASLRTTPSAFGNTQLDKQQNHSPALSPSPLQTQAVEEPFSFASLFAGFKKALKAPSPSSVLHVTPSPTANRPPHQHQGPANKIFLSEPPSK-----------------SAAELS-RPIFRAIDGADAREFRLFLEDDAETRGNPALALSTYGREGTYASDLFVIIHNTIRHELLDTFQIISVIRTNFLSLSLRDVHNFRQWWRFFFLLWTEYNVYYTNLLEPIIQNICQVDGRSHILKKRLRPLRSSKEWLCLKMEEITSYIEEFESLPPARALCLICKNIHSFAEHLNTYFRGCEHLFPSFIESYHSEQIKLTTECHLIEQLRKNDHFPELMASIIRWIGTTTSSPQDAFDPKQQARVREKWLASHVFWLERPKVWYFFQRYEATHRSIFKRFVTRVRTLDS 449
            H   DS  S++D L +LSIV VTP HS+VL    +P++S S   S STSSHYT+ PS+D+ ++   PSA  +   +  Q                  PF+ AS FAGFK+A K           PSPTA     Q Q P++   L++P S                  SA++ S +P+FRAIDG DAREFR FL+D       P L+L++YGR  TYASD++VI+HNTIR EL+DTF+II+ IR N+LSL+L DVHNFRQWWRFF LLW EY  Y +N+L PI+ NIC VDGRS +LKKRL PLR+SKEWLCLKMEEITSY+EEFESLPPAR LCLICKN+HSFA+++++YFRGCE L P FIESYH  Q+KL+TEC LI+QLRKN+HF EL+ASIIRWIG +T+        KQQA+ REKWLASH+FWLERPK+WYFFQRY+A+HRS+FK+FVT VRTLDS
Sbjct:    8 HRSVDSALSEED-LAELSIVHVTPAHSVVLDAPPSPTNS-SPPHSHSTSSHYTTPPSVDLFNI---PSAASSAHSEPDQ------------------PFTLASFFAGFKRAWK-----------PSPTAAPENSQQQSPSSVSQLNQPSSPTNQSRHLQQPISLSSNHSASKCSTQPLFRAIDGDDAREFRQFLDDHVHEAPAPLLSLASYGRSDTYASDIWVIMHNTIRVELMDTFEIIAAIRANYLSLTLADVHNFRQWWRFFCLLWAEYIKYNSNVLHPIVHNICVVDGRSDVLKKRLAPLRASKEWLCLKMEEITSYVEEFESLPPARVLCLICKNVHSFAQNVSSYFRGCEKLLPPFIESYHGHQVKLSTECQLIDQLRKNNHFAELIASIIRWIGVSTAGSAGV-GHKQQAKEREKWLASHLFWLERPKMWYFFQRYDASHRSLFKQFVTSVRTLDS 435          
BLAST of Gchil9255.t1 vs. uniprot
Match: R7QPL2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPL2_CHOCR)

HSP 1 Score: 283 bits (724), Expect = 2.980e-87
Identity = 140/288 (48.61%), Postives = 199/288 (69.10%), Query Frame = 0
Query:  160 LSRPIFRAIDGADAREFRLFLED-DAETRGNPALALSTYGREGTYASDLFVIIHNTIRHELLDTFQIISVIRTNFLSLSLRDVHNFRQWWRFFFLLWTEYNVYYTNLLEPIIQNICQVDGRSHILKKRLRPLRSSKEWLCLKMEEITSYIEEFESLPPARALCLICKNIHSFAEHLNTYFRGCEHLFPSFIESYHSEQIKLTTECHLIEQLRKNDHFPELMASIIRWIGTTTS-SPQDAFDPKQQARVREKWLASHVFWLERPKVWYFFQRYEATHRSIFKRFVTRVR 445
            L+R +F + DGADAREF+ FL D + E    P L L  YG +G +ASDL+V++HNT R EL D F++++++R+++LSL L D++N R+WWRFF  LW+EY  Y   LL+PI+  IC +DGR  +L KRL PLR ++EWL LKMEE+TSYIEEFE+LPP RAL L CKN+ SF +    YF G E L P F+ESY+ E++KL+ E  LI+++R   +F E + +++RW+GT  S S  +A     Q R RE+W+ +H+FWLER  +  F+++YEA+H  +   F  R +
Sbjct:  186 LNRRLFCSRDGADAREFQEFLIDHEGERLRTPVLCLVGYGGQGAHASDLWVLMHNTFRRELFDVFEMLNIVRSSYLSLILSDIYNLRKWWRFFVTLWSEYENYENTLLDPIVHKICLLDGRGDVLLKRLGPLRETREWLRLKMEEVTSYIEEFENLPPGRALSLFCKNVDSFGDRAMGYFAGVERLLPRFVESYYGEEVKLSVEGQLIKRMRNGKYFAEFVIALVRWMGTEESFSTTNA-----QERKRERWMNTHLFWLERLSLSKFYRKYEASHGCVLTYFQGRFK 468          
BLAST of Gchil9255.t1 vs. uniprot
Match: A0A1X6NYH8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYH8_PORUM)

HSP 1 Score: 85.5 bits (210), Expect = 4.440e-14
Identity = 73/285 (25.61%), Postives = 125/285 (43.86%), Query Frame = 0
Query:  157 AAELSRPIFRAIDGADAREFRLFLEDDAETR-GNPALALSTYGREGTYASDLFVIIHNTIRHELLDTFQIISVIRTNFLSLSLRDVHNFRQWWRFFFLLWTEYNVYYTNLLEPIIQNICQVDGRSHILKKRLRPLRSSKEWLCLKMEEITSYIEEFESLPPARALCLICKNIHSFAEHLNTYFRGCEHLFPSFIESYHSEQIKLTTECHLIEQLRKNDHFPELMASIIRWIGTTTSSPQDAFDPKQQARVREKWLASHVFWLERPKVWYFFQRYEATHRSIFKRF 440
            AAE++ P   A  G       LF  + A+T   +P L  S YGR  ++ASD FV+ +N +R EL D  Q    IR    SL++  +   + W   FF     +      +L P +Q+   V  R H  K+ +R L ++++WL +K EE+++Y++   S P A  L L+ K     +     Y    E   P  +   H  + K   E  ++   R ++   E +  ++ W+                 R+   W+A+ + W +R     + + + + HR I + F
Sbjct:  359 AAEMAVPSLMADRGV-----ALFFRELAQTGFHSPMLCSSDYGRRWSWASDPFVLKNNAMRRELFDLVQCTDAIRVIASSLTILHLKELQVWLTGFFRFSHLFFELDAKVLLPAVQSA--VGMRDHDAKRAIRFLSTTRDWLLMKQEEVSAYLDGLTSFPLAVVLRLLFKCFQELSPRYLEYCTVQERHLPPLLLRTHQPKDKALLETKMLALARGHNKSGESVVFLLSWMN--------------DKRLLNAWIAARLTWRQRLSYNGWVEAFRSNHRRIVEFF 622          
BLAST of Gchil9255.t1 vs. uniprot
Match: A0A1X6P8M3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8M3_PORUM)

HSP 1 Score: 68.6 bits (166), Expect = 1.270e-8
Identity = 59/239 (24.69%), Postives = 105/239 (43.93%), Query Frame = 0
Query:  212 HNTIRHELLDTFQIISVIRTNFLSLSLRDVHNFRQWWRFFFLLWTEYNVYYTNLLEPIIQNICQVDGRSHILKKRLRPLRSSKEWLCLKMEEITSYIEEFESLPPARALCLICKNIHSFAEHLNTYFRGCEHLFPSFIESYHSEQIKLTTECHLIEQLRKNDHFPELMASIIRWIGTTTSSPQDAFDPKQQARVREK----WLASHVFWLERPKVWYFFQRYEATHRSIFKRFVTRVRT 446
            HN +R E+ D ++++  +      L   D  + R WW  F     ++      LL P +      D     L+  LR LR++KE++ +K++E+  Y++ FES+PP     L+ K + + A  L  YF   E +FP+ + + +S    +  E  ++E L      P  +A   R   TT  S QD+     +     K    W+  ++    R     + + +  +HR + + F  R  T
Sbjct:  549 HNALRREVSDLYEMLLAMVDFGGGLKKADFRDLRSWWSVFARFARDWLDVEKRLLFPWVNATGAHDWE---LQATLRELRTTKEFIDMKLDELAIYLDGFESMPPTEMFSLLYKCVDTLAPRLMGYFCTQERVFPANVRATYSADDVVRLEKEMVEALLHGP--PAALAGGGR--STTGGSGQDSLCALSRGMTDAKHLKVWVQRNLSATARLSYGKWVKSFNESHRGVVRNFKERAPT 780          
The following BLAST results are available for this feature:
BLAST of Gchil9255.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3ITE3_9FLOR2.150e-16356.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QPL2_CHOCR2.980e-8748.61Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NYH8_PORUM4.440e-1425.61Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P8M3_PORUM1.270e-824.69Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2879473..2880825 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9255.t1Gchil9255.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2879473..2880825 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9255.t1 ID=Gchil9255.t1|Name=Gchil9255.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=451bp
MSSSVPPQHLRFDSVFSDDDDLTQLSIVDVTPRHSLVLAPSHSESTALST
STSSHYTSKPSIDIASLRTTPSAFGNTQLDKQQNHSPALSPSPLQTQAVE
EPFSFASLFAGFKKALKAPSPSSVLHVTPSPTANRPPHQHQGPANKIFLS
EPPSKSAAELSRPIFRAIDGADAREFRLFLEDDAETRGNPALALSTYGRE
GTYASDLFVIIHNTIRHELLDTFQIISVIRTNFLSLSLRDVHNFRQWWRF
FFLLWTEYNVYYTNLLEPIIQNICQVDGRSHILKKRLRPLRSSKEWLCLK
MEEITSYIEEFESLPPARALCLICKNIHSFAEHLNTYFRGCEHLFPSFIE
SYHSEQIKLTTECHLIEQLRKNDHFPELMASIIRWIGTTTSSPQDAFDPK
QQARVREKWLASHVFWLERPKVWYFFQRYEATHRSIFKRFVTRVRTLDSI
*
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