Gchil9215.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9215.t1
Unique NameGchil9215.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length478
Homology
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BLAST of Gchil9215.t1 vs. uniprot
Match: R7QI03_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI03_CHOCR)

HSP 1 Score: 105 bits (262), Expect = 1.460e-22
Identity = 65/164 (39.63%), Postives = 94/164 (57.32%), Query Frame = 0 
Query:  232 IDLYCDGTILSKSGSQNVSTLRVRFNNLKGRSNEWHEVGIAPCVDSNGTEHSALE--LRRERLQLFQRFLFLALKDLIDASNAGIVAGDAILLSRICMVVADQPQESAFFCLKNADSYKDCTLCEMPF-----KRSAEDPEFVDPVVA-QTSAMNFPSRDVSKT 387
            ID+Y DGT LS SG+Q+ + +RVRF NLKGR++ W EVGI P    +  E    +  +++E++QL+  F FL L++ +  S+AG       +  R+ M VADQ QE     LK  DS+ DCT C MP      KR+ + P+      + Q SA +F S + S+T
Sbjct:   17 IDIYSDGTTLSSSGTQSANNMRVRFANLKGRTDVWQEVGIVPTPKFDNIEKRPSDDAVKKEKVQLWHNFTFLVLREALLRSHAGTTVDGVKVFPRLSMNVADQVQERPTCGLKGHDSFCDCTHCTMPSRLKKRKRAFQAPQDESRTESEQQSAPSFLSNNESET 180
The following BLAST results are available for this feature:
BLAST of Gchil9215.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
R7QI03_CHOCR1.460e-2239.63Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2617997..2619430 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9215.t1Gchil9215.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2617997..2619430 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9215.t1 ID=Gchil9215.t1|Name=Gchil9215.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=478bp
MVAPLHSSSTLPKGECSDSQENAHISASESVYNVTDSHDPRFSSNQEVMS
HETNLAKIVYSFFKENRDTSSPLYPSIKKSNSCPEELHPWCQEILDHCNR
EQFTLGQTRSEAELVLRLERHISEENRHLSNLSRNSDAFTSYVDNVRKWK
VRNENWRQASIETSFGTNETGVFRSTLELMMEEVETAGGAASVQSFTANN
KQNERRYSAPWNSRMIGKYSQNNGPNVVIVAIDLYCDGTILSKSGSQNVS
TLRVRFNNLKGRSNEWHEVGIAPCVDSNGTEHSALELRRERLQLFQRFLF
LALKDLIDASNAGIVAGDAILLSRICMVVADQPQESAFFCLKNADSYKDC
TLCEMPFKRSAEDPEFVDPVVAQTSAMNFPSRDVSKTIQYQLIAARQRLQ
NAKPKRSLNENEKQNLDNARIYWRDRSAHEFPPALAAFQGLGSFPFLLYE
TIAFDTLHVIGSGDISAVARQSWKMAW*
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