Gchil9210.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9210.t1
Unique NameGchil9210.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length1071
Homology
BLAST of Gchil9210.t1 vs. uniprot
Match: A0A2V3IYD6_9FLOR (CYCLIN domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYD6_9FLOR)

HSP 1 Score: 202 bits (513), Expect = 3.360e-53
Identity = 121/278 (43.53%), Postives = 174/278 (62.59%), Query Frame = 0
Query:  703 SPPQKRARHAGAS-------IDSLVLANVLLAKSRVPRGFVRSARPNV--IDARLREVVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCMLLACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFTPSSVLTLLLRHIVPRHIQPGATQLSSVLSHVAMLHAQLAWRAPATIALACVLLCLHVLGVHLRSVLNVAHTDLRRALCTPAVVDSAVLLWHKWLAL-----HHPCAKSRWLLRHWPDVFPHAY 966
            +PP KR RH   S       +  L+  N L   S++P  F+R  +     IDA +RE+VVDW+MEVA +YAA + TL+L++NYLDRML+   VTRASVQ VAVVC++LACKM   E P++ + VAMCD S + S +  ME TIL  LNF+LNV T S+ +  L+R + P +    A +L+  L+HVA+L A++ WR+P  IA+A VL+CL    + +R  L++A   ++  + +P  + +AV +W+KWL L      HP   +RWLL+ WP+  P  Y
Sbjct:   52 APPSKRPRHTRVSQPRTTQHLQLLITQNALNFASQLPHNFLRIQQQQQAHIDANVREIVVDWMMEVATEYAANAHTLSLSINYLDRMLSKTHVTRASVQLVAVVCLMLACKMHECEAPTVAESVAMCDRSATHSMVLDMEYTILQTLNFNLNVPTASATVPPLIRQLFPPNHHGPALKLAHFLTHVALLDAEITWRSPGCIAVASVLMCLQAFRIPIRHALSIAQRAVQARMQSPDTLHAAVHIWNKWLKLFDDVVEHP---TRWLLKQWPEHSPAHY 326          
BLAST of Gchil9210.t1 vs. uniprot
Match: R1DRT4_EMIHU (Cyclin N-terminal domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DRT4_EMIHU)

HSP 1 Score: 84.0 bits (206), Expect = 8.800e-14
Identity = 66/183 (36.07%), Postives = 92/183 (50.27%), Query Frame = 0
Query:  728 KSRVPRGFVRSARPNVIDARLREVVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCMLLACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFTPSSVLTLLLRHIVPRHIQP----GATQLSSVLSHVAMLHAQLAWRAPATIALACVLLCLHVL 906
            + RVP  F+ S     I+A +R ++VDWL+EV  +Y     TL L VNY+DR L    V R+ +Q V V CMLLA K +   PP++ D V + D + +   + AME  +L RLNFDL+  T  + L        PR   P     AT L   L  + +         P+ +A A + L LH L
Sbjct:   37 RHRVPPHFLASQHD--INATMRGILVDWLVEVGEEYKLQRETLHLCVNYIDRFLTHVPVARSKLQLVGVGCMLLAAKYEDVSPPTVDDLVYISDNTYTRDEILAMEGAVLQRLNFDLSAVTSIAFL--------PRFCTPLLAADATALCFYLCELTLPEVGFVQFIPSEVAAASIHLALHTL 209          
BLAST of Gchil9210.t1 vs. uniprot
Match: A0A7S0ETL5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ETL5_9EUKA)

HSP 1 Score: 83.6 bits (205), Expect = 3.090e-13
Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = 0
Query:  721 LANVLLAKSRVPRGFVRSARPNVIDARLREVVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCMLLACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFTPSSVL 853
            L  + + K +V   F+++ R   I+A++R +++DWL+EVA +Y     TL LAVNY+DR L+   V R+ +Q V V CML+A K +   PP++ + V + D +     + +ME  IL RLNF+L++ T    L
Sbjct:  124 LQELEVGKQQVSPHFMQNQRD--INAQMRAILIDWLVEVAEEYRLVPETLHLAVNYIDRFLSYVPVARSKLQLVGVTCMLIASKYEEIHPPAVDEFVYISDNTYKREEIMSMEAIILNRLNFELSIATSKGFL 254          
BLAST of Gchil9210.t1 vs. uniprot
Match: A0A0M0JCK3_9EUKA (Cyclin N-terminal domain-containing protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JCK3_9EUKA)

HSP 1 Score: 82.0 bits (201), Expect = 5.400e-13
Identity = 59/175 (33.71%), Postives = 91/175 (52.00%), Query Frame = 0
Query:  730 RVPRGFVRSARPNVIDARLREVVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCMLLACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFTPSSVLTLLLRHIVPRHIQPGATQLSSVLSHVAMLHAQLAWRAPATIALACVLLCLH 904
            RV   F++S R   I+A +R +++DWL+EVA +Y   S TL LAVNY+DR L+   V R+ +Q V V CML+A K +   PP++ + V + D +     +  ME  +L RLNF+L+V T    +   L+             L   L+ + +         P+ +A A + L LH
Sbjct:   82 RVAPQFMQSQRD--INATMRGILIDWLVEVAEEYRLESETLYLAVNYIDRFLSHVPVNRSKLQLVGVTCMLVASKYEEIHPPAVDEFVYISDNTYKREEILHMEGMVLNRLNFELSVATAKVFINRFLKAARAGECDSTTEMLCKYLTELTLQEYSFVKYRPSEVAAAALRLALH 254          
BLAST of Gchil9210.t1 vs. uniprot
Match: A0A6A1V9A6_9ROSI (B-like cyclin n=1 Tax=Morella rubra TaxID=262757 RepID=A0A6A1V9A6_9ROSI)

HSP 1 Score: 80.9 bits (198), Expect = 2.230e-12
Identity = 43/112 (38.39%), Postives = 68/112 (60.71%), Query Frame = 0
Query:  742 NVIDARLREVVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCMLLACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFTPSSVL 853
            N I A +RE++VDWL+EVA +Y     T+ L V+Y+DR L+CC++ R  +Q + V CML+A K +   PP + D   + D + +   +  MET +L  LNF++ + T  + L
Sbjct:   82 NNISAHMREILVDWLVEVAEEYKLVPDTVYLTVSYIDRFLSCCAIQRNKIQLLGVSCMLIASKYEEISPPHVEDFCYITDNTYTKEEVVDMETEVLKFLNFEMGIPTTKTFL 193          
BLAST of Gchil9210.t1 vs. uniprot
Match: E4YY15_OIKDI (Cyclin N-terminal domain-containing protein (Fragment) n=1 Tax=Oikopleura dioica TaxID=34765 RepID=E4YY15_OIKDI)

HSP 1 Score: 78.6 bits (192), Expect = 4.980e-12
Identity = 51/154 (33.12%), Postives = 85/154 (55.19%), Query Frame = 0
Query:  744 IDARLREVVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCMLLACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFTPSSVLTLLLRHIVPRHIQPGATQLSSVLSHVAMLHAQLAWRAPATIALA 897
            +DAR+R ++VDWLMEVA +Y     T+ LAVN++DR L+  +V R  +Q V    ML++ K +    P + + V + D + +   +  ME+ ++  L FD    TP   L   +R +  +   P  T+L+  LS +A++  ++   AP+ IA A
Sbjct:   47 LDARMRSILVDWLMEVALEYKMVDETVYLAVNFMDRFLSQMAVLRGKLQLVGTAAMLISSKFEEIYAPEVSEFVYITDDTYTRQQVLKMESLMIKTLGFDFCAVTPLDYLNRFIRAL--QTTDPQVTKLARFLSDIALIDYRMVQYAPSLIATA 198          
BLAST of Gchil9210.t1 vs. uniprot
Match: A0A836CHW6_9STRA (Cyclin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHW6_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 5.880e-12
Identity = 63/189 (33.33%), Postives = 91/189 (48.15%), Query Frame = 0
Query:  744 IDARLREVVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCMLLACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFTPSSVLTLLLRHIVPRHIQPGATQLSSVLSHVAMLHAQLAWRAPATIALACVLLCLHVLGVHLRSVLNVAHTDLRRALCTPAVVD 932
            I+AR+R ++VDWL+EV  ++     TL LA+  LDR LA  +V R  +Q   V  +LLA K +   PP M D V + D + +   + A E  +L RL F L V T   V   LLR++   H      QL+  +S   +L A++    P+  A A V L       +  S     +T    A  TP + D
Sbjct:    7 INARMRAILVDWLVEVHMRFRLVPDTLYLAIYALDRYLAAATVAREGLQVAGVAALLLASKYEEIYPPEMCDLVYVTDRACAREAILAAERDMLARLEFRLTVPT---VYCFLLRYLKAAHADRCIVQLACYISERMLLEARMLRHLPSVAASAAVYLSRRACNRNAWSPTLARYTGYNVAALTPCLRD 192          
BLAST of Gchil9210.t1 vs. uniprot
Match: A0A7S3AJI4_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AJI4_9EUKA)

HSP 1 Score: 79.3 bits (194), Expect = 7.040e-12
Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 0
Query:  730 RVPRGFVRSARPNVIDARLREVVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCMLLACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFT 848
            RV   F++S R   I+A +R +++DWL+EVA +Y     TL LAVNY+DR LA   V R+ +Q V V CML+A K +   PP++ + V + D +     +  ME  IL RL F+L+V T
Sbjct:  128 RVSPHFMQSQRD--INATMRSILIDWLVEVAEEYRLVPDTLYLAVNYIDRFLAHVPVNRSKLQLVGVTCMLIASKYEEIHPPAVDEFVYISDNTYKREEILHMEGMILNRLKFELSVAT 244          
BLAST of Gchil9210.t1 vs. uniprot
Match: A0A7S4II30_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4II30_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 1.600e-11
Identity = 62/189 (32.80%), Postives = 91/189 (48.15%), Query Frame = 0
Query:  716 IDSLVLANVLLAKSRVPRGFVRSARPNVIDARLREVVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCMLLACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFTPSSVLTLLLRHIVPRHIQPGATQLSSVLSHVAMLHAQLAWRAPATIALACVLLCLH 904
            +D       L  + RV   F++  R   I+A +R ++VDWL+EVA +Y     TL LAVNY+DR LA   V R+ +Q V V CML+A K +   PP++ + V + D +     +  ME  IL RL F+L+  T    L   L+            +L   L  + +         P+ IA A + L LH
Sbjct:  109 VDIFSYLRELELEHRVSPHFMQGQRD--INATMRSILVDWLVEVAEEYRLVPETLYLAVNYIDRFLAHVPVNRSKLQLVGVTCMLIASKYEEIHPPAVDEFVYISDNTYKREEILHMEGMILNRLKFELSAATVKVFLNRFLKAAKVGECDQTTEKLCEYLCELTLQEYSFIKYRPSEIAAAALRLALH 295          
BLAST of Gchil9210.t1 vs. uniprot
Match: E4WYP7_OIKDI (Cyclin N-terminal domain-containing protein n=3 Tax=Oikopleura dioica TaxID=34765 RepID=E4WYP7_OIKDI)

HSP 1 Score: 78.6 bits (192), Expect = 1.850e-11
Identity = 51/154 (33.12%), Postives = 85/154 (55.19%), Query Frame = 0
Query:  744 IDARLREVVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCMLLACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFTPSSVLTLLLRHIVPRHIQPGATQLSSVLSHVAMLHAQLAWRAPATIALA 897
            +DAR+R ++VDWLMEVA +Y     T+ LAVN++DR L+  +V R  +Q V    ML++ K +    P + + V + D + +   +  ME+ ++  L FD    TP   L   +R +  +   P  T+L+  LS +A++  ++   AP+ IA A
Sbjct:  174 LDARMRSILVDWLMEVALEYKMVDETVYLAVNFMDRFLSQMAVLRGKLQLVGTAAMLISSKFEEIYAPEVSEFVYITDDTYTRQQVLKMESLMIKTLGFDFCAVTPLDYLNRFIRAL--QTTDPQVTKLARFLSDIALIDYRMVQYAPSLIATA 325          
The following BLAST results are available for this feature:
BLAST of Gchil9210.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYD6_9FLOR3.360e-5343.53CYCLIN domain-containing protein n=1 Tax=Gracilari... [more]
R1DRT4_EMIHU8.800e-1436.07Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A7S0ETL5_9EUKA3.090e-1337.59Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A0M0JCK3_9EUKA5.400e-1333.71Cyclin N-terminal domain-containing protein n=1 Ta... [more]
A0A6A1V9A6_9ROSI2.230e-1238.39B-like cyclin n=1 Tax=Morella rubra TaxID=262757 R... [more]
E4YY15_OIKDI4.980e-1233.12Cyclin N-terminal domain-containing protein (Fragm... [more]
A0A836CHW6_9STRA5.880e-1233.33Cyclin-like protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S3AJI4_9EUKA7.040e-1242.02Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A7S4II30_9EUKA1.600e-1132.80Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
E4WYP7_OIKDI1.850e-1133.12Cyclin N-terminal domain-containing protein n=3 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 754..838
e-value: 2.0E-12
score: 57.3
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 748..837
e-value: 5.20874E-13
score: 63.7968
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 738..845
e-value: 4.2E-25
score: 87.9
NoneNo IPR availableGENE3D1.10.472.10coord: 846..913
e-value: 3.1E-36
score: 126.8
NoneNo IPR availableGENE3D1.10.472.10coord: 742..845
e-value: 3.1E-36
score: 126.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1056..1070
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..213
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..522
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 979..993
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 977..1070
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1027..1053
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 994..1008
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 380..422
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..421
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 183..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 683..709
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 635..1070
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..615
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 616..634
IPR039361CyclinPANTHERPTHR10177CYCLINScoord: 742..902
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 740..845

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2573751..2577419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9210.t1Gchil9210.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2573751..2577419 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9210.t1 ID=Gchil9210.t1|Name=Gchil9210.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=1071bp
MATATSTVTSDRHCTRADPPAVASPKAVPRSSSFTRSRRFLTGKGLSARE
SFGVVDESTTRHMFQAARMQLMDMLETESNTPPPPPSVSSKSLPRASSAH
IPPAPPLPWGKRNGITRAASHGSVVRNVNSKGVGGVCSEVRFKSVADGRK
WFENFEAADSTAEVSASSAVSDNNVGMSKARVHNDGIAEKYAHEKQRRKQ
GSSGADDASSLESANENALKRVAVVTMPESESVTPCSSDAPLSPYVPCAL
PSDRFCVSARGFLEDGVVTDVDADCAKVARRDSHAAYVANVLGDQHVDED
EQVINVDDDARVAGDRETRRIEMHEKKLSGLTRIHEFGNSVKRKLPRAGS
FSRVARSRSVGRVGRLRSFGRKEVITQEQQAHASACSAMRTPKRKQRLGK
QSETQLAPHDKRGEHEDSGALLRSRSVPATLWWKRVSRGAQSCEKSGKGG
DSGGGGEGEGEGDGECTAHGVSPSHSVPRSKSVHFADEAGSIETAAETAA
ETAAEQDGGARTRAGSAHGAPADGFVTIERRIKRTHADGRVQVVTRRVRV
KAERVLDNGDVIVRRRVTRARADGAGTELMTVRQVISRKETSADAAKRRE
QSARHSTKWMRRSSSLPDVTFITAVLALVLFVPVCPPPSSPSLPPPSPHI
AVDMPLATDRRADARAPASRRLPLRARVRDAVEHPRPAVKRCRAAPPRPS
APSPPQKRARHAGASIDSLVLANVLLAKSRVPRGFVRSARPNVIDARLRE
VVVDWLMEVAAQYAAPSTTLALAVNYLDRMLACCSVTRASVQPVAVVCML
LACKMDHSEPPSMLDGVAMCDLSTSTSTLRAMETTILLRLNFDLNVFTPS
SVLTLLLRHIVPRHIQPGATQLSSVLSHVAMLHAQLAWRAPATIALACVL
LCLHVLGVHLRSVLNVAHTDLRRALCTPAVVDSAVLLWHKWLALHHPCAK
SRWLLRHWPDVFPHAYPRGAPLSPHQLRLALQTDLQLDETTPASPSPSPS
PSPSPLRESLPTTPTTAEPARRVECPPTPSSHTTASQRGDSDAPVSNVAL
LSSSPPLHHHHDELARDAQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR039361Cyclin
IPR036915Cyclin-like_sf