Gchil9196.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9196.t1
Unique NameGchil9196.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length267
Homology
BLAST of Gchil9196.t1 vs. uniprot
Match: A0A2V3IZJ8_9FLOR (Tubulin-specific chaperone C n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZJ8_9FLOR)

HSP 1 Score: 287 bits (734), Expect = 3.300e-94
Identity = 139/262 (53.05%), Postives = 185/262 (70.61%), Query Frame = 0
Query:    1 MSLISISHQLEAEFAAQCEQLCSAIDAAELATLPDIRAHLERIRELLGQGAEWWTKYDVRRNSEKLLSLERDVDHATLRLKPRRRFRFSQIPTSETSAVRSNGSSTMHKEAPPLGQLRNGIFVDSRSVRDGKVELKDLDGQILSIMGLKNTRVFLEGTPAALRLTNLISCDVLSVVVNGTVFISECKDCTVGVGCHQLRIHQSRSCSLWTCSNSVPIIEGCERMRFGELQVQGRRGCWDDVKDFSWLREDHSPNWQLLGEKR 262
            M+  S + QLEA F ++C  L +AI++A + +LP + A L+ +REL+ QGAEWWTKYD+RRNSE L +LE +VD+   RLKPRRRFRF+Q P+   +      ++   ++AP   +  NG+ +DS SVR+GK+EL  L  Q +S++GL N RV L+G+  ALR + L  C V    V+G+VF+S C  C + V CHQLRIH+S +CSLWTCS S PIIE C+ MRFGEL + GR+GCW+DVKDFSWLRE  SPNWQL+ EKR
Sbjct:    1 MNTPSKAEQLEANFISKCNLLKAAINSASITSLPSLSAQLDSLRELVAQGAEWWTKYDIRRNSETLSALELEVDNVRTRLKPRRRFRFTQTPSEVIAQPPKQDAALTPQKAPRAAE--NGLLIDSASVRNGKIELDSLREQNVSLVGLTNVRVSLKGSLRALRFSQLTRCHVEGAFVDGSVFMSNCDGCDIEVACHQLRIHESHACSLWTCSGSAPIIENCDSMRFGELVLDGRKGCWNDVKDFSWLREGSSPNWQLVSEKR 260          
BLAST of Gchil9196.t1 vs. uniprot
Match: UPI00188507F9 (tubulin-specific chaperone C-like n=1 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI00188507F9)

HSP 1 Score: 104 bits (259), Expect = 4.960e-23
Identity = 70/241 (29.05%), Postives = 115/241 (47.72%), Query Frame = 0
Query:   40 LERIRELLGQGAEWWTKYDVRRNSEKLLSLERDVDHATLRLKPRRRFRF--SQIPTSETSAVRSNGSSTMHKEAPPLGQLRNGIFVDSRSVRDGKVELKD--LDGQILSIMGLKNTRVFLEGTPAALRLTNLISCDVLSVVVNGTVFISECKDCTVGVGCHQLRIHQSRSCSLWTCSNSVPIIEGCERMRFGELQVQGR--------------RGCWDDVKDFSWL-REDHSPNWQLLGEK 261
            L+ +   +   A +   Y++RR  ++   L+  V      L PR+RF F   +   ++ + V +   +T    AP         F D RS  D  ++L+   + G+ +++  L   RV + G PA + L++L  C +L   V  +VF+ +C+ CT+ V C QLR H S  C ++    S  ++E CER+RF    + G               R  W+DV DF+WL +   SPNW +L E+
Sbjct:   15 LQAVHRFIADAAAFLPAYELRRAQQRANELQEHVRQRQDELVPRQRFGFRGKRAARAQPAEVTTQPKATPAPAAPXXXPADECGFRD-RS--DAPLQLRGAAVTGRDVTLTCLTRCRVRVTGAPATVHLSHLRDCRLLLGPVATSVFLEDCRGCTLAVACQQLRAHTSADCDIYLHVTSRAVVEHCERLRFAPYSLGGEDVRADWATTGLSADRNSWNDVDDFNWLSKAQRSPNWSILPEE 252          
BLAST of Gchil9196.t1 vs. uniprot
Match: A0A7S3BTX2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BTX2_9EUKA)

HSP 1 Score: 86.7 bits (213), Expect = 4.770e-17
Identity = 45/133 (33.83%), Postives = 72/133 (54.14%), Query Frame = 0
Query:  144 SIMGLKNTRVFLEGTPAALRLTNLISCDVLSVVVNGTVFISECKDCTVGVGCHQLRIHQSRSCSLWTCSNSVPIIEGCERMR---FGELQV-----------QGRRGCWDDVKDFSWLREDHSPNWQLLGEKR 262
            ++  L N  V L  T  AL +  L  C V +V V G+++++EC +CT+ +G  Q+R+H S  CSL+    S PIIE C  +R   + EL +           Q  +  W+ V DF WL++  SPNW ++ +++
Sbjct:   42 ALSNLTNCNVRLLSTSRALWIRGLKGCTVYAVPVGGSIYLTECHNCTIVIGSRQMRMHTSTDCSLFLHVASHPIIEHCSALRVAPYPELPLELHAAWAAAGLQPDKNSWNQVDDFDWLKQSQSPNWSVMADEQ 174          
BLAST of Gchil9196.t1 vs. uniprot
Match: A0A8C4QQU6_EPTBU (Tubulin folding cofactor C n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QQU6_EPTBU)

HSP 1 Score: 83.6 bits (205), Expect = 8.130e-15
Identity = 67/239 (28.03%), Postives = 107/239 (44.77%), Query Frame = 0
Query:   39 HLERIRELLGQGAEWWTKYDVRRNSEKLLSLERDVDHATLRLKPRRRFRFSQIPTSETSAVRSNGSSTMHKEAPPLGQLRNG----IFVDSRSVRDGKVELKD--LDGQILSIMGLKNTRVFLEGTPAALRLTNLISCDVLSV-VVNGTVFISECKDCTVGVGCHQLRIHQSRSCSLWTCSNSVPIIEGCERMRFGELQ----------VQGRRGC-WDDVKDFSWLRE-DHSPNWQLL 258
            HL R+R +L     +   + VR+  E L  LE  +     RLKP+RRF FS     E      + +     +    G  RN     I      VR  +V + +  + G+ +++  L    V L G  A+LR++++ +  V+    V+ +VF++ C  CTV V   QLR+H   +C ++   +S  ++E    +RF              V    G  WD V DF WL   + SPNW ++
Sbjct:  123 HLARMRSVLSAKLAYLPAFQVRQAQEALHDLEAQICRCRERLKPKRRFAFSDRRKKEREGESEDPAVGGAADRVTEGAERNPHPKEILCGVHDVRGEEVTMHEDEVRGRHVTLSALHGCTVLLHGEAASLRVSDVTASSVVVCGAVSSSVFLARCARCTVAVRGQQLRMHACTACDVYVRLSSRAVLEASTDVRFAPFPDSLRSVPGTAVSDTAGTNWDLVDDFDWLVPGEPSPNWMVI 361          
BLAST of Gchil9196.t1 vs. uniprot
Match: A0A1B0AUT8_9MUSC (C-CAP/cofactor C-like domain-containing protein n=4 Tax=Glossina TaxID=7393 RepID=A0A1B0AUT8_9MUSC)

HSP 1 Score: 81.3 bits (199), Expect = 5.120e-14
Identity = 60/245 (24.49%), Postives = 112/245 (45.71%), Query Frame = 0
Query:   35 DIRAHLERIRELLGQGAEWWTKYDVRRNSEKLLSLERDVDHATLRLKPRRRFRFSQIPTSETSAVRSNGSSTMHKEAPPLGQLR---NGIF---VDSRSVRDGKVELKDLDGQILSIMGLKNTRVFLEGTPAALRLTNLISCDVLSVVVNGTVFISECKDCTVGVGCHQLRIHQSRSCSLWTCSNSVPIIEGCERMRFG-----------ELQVQG---RRGCWDDVKDFSWLRED-HSPNWQLL 258
            DI   ++ ++  L     + + + ++     +  L    +    RL P+++F FS    +  + +    S+T  K      +L    N +    + +RS     ++   ++G+ ++I  L+N  V L+G   +L++++  +C  LS  +  ++F   C +CT+ VGC QLR+H S  C ++    S  IIE C  +              + Q  G    +  + DV DF+WL  +  SPNW+LL
Sbjct:  103 DITLEIQELQRYLTTSTMFLSDFKIKACQSIVNELTTRSEDTRARLSPKKKFGFSGRKVAPKTTLNPKLSATTDKVDSSEARLHMATNNVINWTIANRSNEYICLQSDKINGKDITITNLENCFVELQGHAGSLQISHAANCIFLSGPIARSLFAEHCIECTLCVGCQQLRLHSSMKCRVYLHVTSRAIIEDCREIEMAPYNNDYVGIEEDFQAAGLSKEQNNYADVADFNWLSSEISSPNWRLL 347          
BLAST of Gchil9196.t1 vs. uniprot
Match: C1BNN4_CALRO (Tubulin-specific chaperone C n=1 Tax=Caligus rogercresseyi TaxID=217165 RepID=C1BNN4_CALRO)

HSP 1 Score: 79.7 bits (195), Expect = 8.040e-14
Identity = 68/283 (24.03%), Postives = 124/283 (43.82%), Query Frame = 0
Query:    7 SHQLEAEFAAQCEQLCSAIDAAELAT--LPDIRAHLERIRELLGQGAEWWTKYDVRRNSEKLLSLERDVDHATLRLKPRRRFRFSQIPTSETSAVRSNGSSTMHKEAPPLGQLRNGIFVDSRSVRDGKVELK--DLDGQILSIMGLK-NTRVFLEGTPAALRLTNLISCDVLSVVVNGTVFISECKDCTVGVGCHQLRIHQSRSCSLWTCSNSVPIIEGCERMRFG------------ELQVQG----RRGCWDDVKDFSWLREDH-SPNWQLL-GEKRFFPA 266
            S +L+A    + + L  A+   E  T  L ++   ++    L  + A +   YDV++    +L+++          +P++RF F    + +T    +  +S        +   +N   V      +  + L   ++D  I  + G K + R ++   P+ + LT+L  C V+   V  +VF+  C++    + C QLR+H+S+ CS++       IIE C  +RF             EL+           WD+++DF+WL  D  SPNW ++  E R  P 
Sbjct:    6 SFELQAHLNDRIQDLQKALQDKEDITSKLCELDTKIKDFEALFSEKAHFLPSYDVKKLQTAILAIKASYQRHLQSTQPKKRFAFKSRTSMKTREEINTLASDAKAAVQKVYSTKNTAKVTLGDKENESLVLDSGEMDPLISRLRGCKVHLRTYV---PSTVHLTDLEDCVVVFGPVRTSVFVERCRNTVFYLYCQQLRMHESKDCSVYLHVTCKGIIEDCHGIRFAPYPETPFMEDLKELKASSGLSPMENHWDEIQDFNWLSPDQASPNWSIIPSENRKSPT 285          
BLAST of Gchil9196.t1 vs. uniprot
Match: A0A4D9D5F9_9STRA (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5F9_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.030e-13
Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 0
Query:  162 LRLTNLISCDVLSVVVNGTVFISECKDCTVGVGCHQLRIHQSRSCSLWTCSNSVPIIEGCERMRFG---------ELQVQ-----GRRGCWDDVKDFSWLREDHSPNWQLLGEK 261
            LR  NL  C +L   V G V++ +C  CT+ V   QLR+H++   +L+  + + PIIE C+R+RFG         E QV+     G    W +VKDF WLR   SP+WQ+L ++
Sbjct:  240 LRCENLRDCKLLCGPVAGPVYLQDCVGCTLYVAGRQLRVHRTYDTTLYVHTVAGPIIEDCDRLRFGPWALAYPGREEQVEEAGLGGTENAWREVKDFKWLRAQASPHWQVLPQE 353          
BLAST of Gchil9196.t1 vs. uniprot
Match: UPI001C7B4CD8 (TBCC-domain-containing protein n=1 Tax=Guyanagaster necrorhizus MCA 3950 TaxID=1450536 RepID=UPI001C7B4CD8)

HSP 1 Score: 79.7 bits (195), Expect = 1.070e-13
Identity = 73/279 (26.16%), Postives = 121/279 (43.37%), Query Frame = 0
Query:    5 SISHQLEAEFAAQCEQLCSAIDAAELA------TLPDIRAHLERIRELLGQGAEWWTKYDVRRNSEKLLSLERDVDHATLRLKPRRRFRFSQIPTSETSAVRSNGSSTMHKEAPPLGQ-----LRNGIFVDSRSVRDGKVELKDLDGQILSIMGLKNTRVFL----EGTPAALRLTNLISCDVLSVVVNGTVFISECKDCTVGVGCHQLRIHQSRSCSLWTCSNSVPIIEGCERMRFG--------ELQVQGRRGCWDDVKDFSWLREDHSPNWQLLGE 260
            S S    +EF      L + I A + A      T+ ++ A   ++ + L         YD +    +L S+E  ++      KP  RF F +    + S   S+   T      P+ Q       + +   SRS     V+L DL  + + +  L N  V L    E T + +   NL +  +L  ++  ++ + +  +C V VGCHQ R+H SR+  ++    S P+IE C  +RF         ++QV  R+     V+DFS ++   SPNW +L E
Sbjct:   11 SFSQLFSSEFLNDKTDLQNRISACKEAPSISDETIAELLARFAKLTKDLADAVGSLPAYDQKGYGNQLKSIEAALEGLRKASKPVSRFSFKK----QASFNHSHPLPTTTVAVEPISQEPSPSQASMLNFSSRSNELFTVDLSDLSARDVMLSDLANCVVNLISPSELTISVVHAQNLRNVVLLLPMIQSSIMLHDLDNCVVVVGCHQFRMHTSRTVDVYLSIPSHPVIENCSGIRFAGYPSALQRDIQVLSRKSKHLSVQDFSHIKATPSPNWTVLPE 285          
BLAST of Gchil9196.t1 vs. uniprot
Match: A0A8H8A4Y4_9ASCO (C-CAP/cofactor C-like domain-containing protein n=1 Tax=Pneumocystis sp. 'macacae' TaxID=2698480 RepID=A0A8H8A4Y4_9ASCO)

HSP 1 Score: 77.8 bits (190), Expect = 5.520e-13
Identity = 33/87 (37.93%), Postives = 55/87 (63.22%), Query Frame = 0
Query:  177 VNGTVFISECKDCTVGVGCHQLRIHQSRSCSLWTCSNSVPIIEGCERMRFGELQVQGRRGC--WDDVKDFSWLREDHSPNWQLLGEK 261
            ++G  +IS+C++CT  + CHQ R+H S++ +      S PIIE C  +RFG      +  C  W++V+DF WL+++ SPNW ++ E+
Sbjct:  205 ISGPAYISDCQNCTFIIFCHQFRMHDSKNINALISCRSKPIIENCTGIRFGPNPYD-KDSCKTWNEVQDFGWLKQNKSPNWDIIPEE 290          
BLAST of Gchil9196.t1 vs. uniprot
Match: A0A0M0JWW3_9EUKA (Tubulin-specific chaperone c-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JWW3_9EUKA)

HSP 1 Score: 78.2 bits (191), Expect = 5.580e-13
Identity = 64/229 (27.95%), Postives = 103/229 (44.98%), Query Frame = 0
Query:   62 NSEKLLSLERDVDHATLRLKPRRRFRF---SQIPTSETSAVRSNGSSTMHKEAPPLGQLRNGIFVDSRSVRDGKVELKDLDGQIL------------SIMGLKNTRVFLEGTPAALRLTNLISCDVLSVVVNGTVFISECKDCTVGVGCHQLRIHQSRSCSLWTCSNSVPIIEGCERMRFG---------------ELQVQGRRGCWDDVKDFSWLREDHSPNWQLLGE 260
            + E LL  +RD      RL P+++F F   S++ TS+T+A      + +   APP          D+     G    +   GQ L            ++  L    V L  T  AL +  L  C V +V V G+++++EC++CT+ +G  QLR+H S   + +  ++S PIIE C  + F                +  ++  +  W+ V DF WL+   SPNW +L E
Sbjct:  108 SQEALLREQRD------RLAPKKKFGFKNRSKVGTSKTTAP---ADAAVTPAAPPAAAPLPKA--DTFQAPAGCQGFRGHSGQTLIRDAGEGSASDFALEQLVGCEVRLLTTSTALWIRGLKQCTVFAVPVGGSIYVTECEECTLYLGSRQLRMHTSTKVAFYIHTSSHPIIEHCTGLTFAPYPSPLPITLAGAFADAALKPEQNQWELVDDFDWLKAAQSPNWAVLPE 325          
The following BLAST results are available for this feature:
BLAST of Gchil9196.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A2V3IZJ8_9FLOR3.300e-9453.05Tubulin-specific chaperone C n=1 Tax=Gracilariopsi... [more]
UPI00188507F94.960e-2329.05tubulin-specific chaperone C-like n=1 Tax=Pollicip... [more]
A0A7S3BTX2_9EUKA4.770e-1733.83Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A8C4QQU6_EPTBU8.130e-1528.03Tubulin folding cofactor C n=1 Tax=Eptatretus burg... [more]
A0A1B0AUT8_9MUSC5.120e-1424.49C-CAP/cofactor C-like domain-containing protein n=... [more]
C1BNN4_CALRO8.040e-1424.03Tubulin-specific chaperone C n=1 Tax=Caligus roger... [more]
A0A4D9D5F9_9STRA1.030e-1338.60C-CAP/cofactor C-like domain-containing protein n=... [more]
UPI001C7B4CD81.070e-1326.16TBCC-domain-containing protein n=1 Tax=Guyanagaste... [more]
A0A8H8A4Y4_9ASCO5.520e-1337.93C-CAP/cofactor C-like domain-containing protein n=... [more]
A0A0M0JWW3_9EUKA5.580e-1327.95Tubulin-specific chaperone c-like protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006599CARP motifSMARTSM00673carpcoord: 186..220
e-value: 0.064
score: 22.4
coord: 148..185
e-value: 7400.0
score: 5.5
IPR012945Tubulin binding cofactor C-like domainPFAMPF07986TBCCcoord: 143..231
e-value: 5.4E-22
score: 77.8
IPR016098Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminalGENE3D2.160.20.70coord: 125..263
e-value: 1.8E-35
score: 123.9
IPR027684Tubulin-specific chaperone CPANTHERPTHR15139TUBULIN FOLDING COFACTOR Ccoord: 9..261
IPR017901C-CAP/cofactor C-like domainPROSITEPS51329C_CAP_COFACTOR_Ccoord: 112..246
score: 20.021042

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2469425..2470225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9196.t1Gchil9196.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2469425..2470225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9196.t1 ID=Gchil9196.t1|Name=Gchil9196.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=267bp
MSLISISHQLEAEFAAQCEQLCSAIDAAELATLPDIRAHLERIRELLGQG
AEWWTKYDVRRNSEKLLSLERDVDHATLRLKPRRRFRFSQIPTSETSAVR
SNGSSTMHKEAPPLGQLRNGIFVDSRSVRDGKVELKDLDGQILSIMGLKN
TRVFLEGTPAALRLTNLISCDVLSVVVNGTVFISECKDCTVGVGCHQLRI
HQSRSCSLWTCSNSVPIIEGCERMRFGELQVQGRRGCWDDVKDFSWLRED
HSPNWQLLGEKRFFPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006599CARP_motif
IPR012945Tubulin-bd_cofactor_C_dom
IPR016098CAP/MinC_C
IPR027684TBCC
IPR017901C-CAP_CF_C-like