Gchil9192.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9192.t1
Unique NameGchil9192.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length568
Homology
BLAST of Gchil9192.t1 vs. uniprot
Match: A0A2V3IM97_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM97_9FLOR)

HSP 1 Score: 468 bits (1205), Expect = 1.080e-156
Identity = 244/520 (46.92%), Postives = 329/520 (63.27%), Query Frame = 0
Query:   43 FPVALGRRSYRGRPSILLPNHTCIGTFSSATSEFSDKGFPDALLRDAYLDLRLASQRDARHRHGTLATQRIMVAVTLHLSVQIQTKNVTVRVRNAAGLKAFVDDVREIESHSKGSEFEYVPGKTTTRGFEVYEWQLIVTLQAKNNSSDFEEYVRSLADDARSGIDLEIPLERFDGKKLWFRPKFAFGCVFGWDAAAVMSAHAASS----GSDSSAVLFCANSLSGRKKEQDSFHGEIAHWAARSLQGVVRFDAVVLPIIVDRSMSECSTDDKGCMREASRLNRKLFERVSDNVVAELDKIGVEDEVYKQIVLIPFCRLGTHATGMERRDACSASQRYGQMHNTLMPYALLGKFYKWATLYDLDEYIAMTDGKGPMQHTQRVRAGALFDDMLRESEHMTKAAFTIAWLNFQILRRDVSSITHEVLRGRSQTLVPAASMPSSXXXXXXXXXXXSECYDTQRVPTGKAVVRRDVGLGFTVHQPLVHLRARHLAHVKWQVSCRSERVRVWHARLFHNPLGACMY 558
            F +A+  +     PSI  P   C G+FSS +S  S+  FP+A+LRDAYLD R AS R A  +HG L  QR+++A++ HLSV+++    TVR+ NA  ++  +DDVREIES SK   FEY PG+TT RG EV EWQ+I+TL++     DFE+++R+LA D    + L++ L  FDG    F P+ + GC+FGWD   ++  HA +        SSAVL CANSLSG KK Q+  H E+AHWAAR+L+G VRFD VVLP+IVD S +ECS +D  C  + SR N  LF  ++ NV  EL +IGV +EV++++VLIPFCRLG H  G E  + CS SQRYGQ+  T MPY++L K++KWA++YDLDEYIA    KG +       A  LFD +L E+ H+   AF I WLNF+I R+D+ +ITHE++ G +  LV     PS+           + CY   R   GKAVVR DVGLGF++HQP+V +    L H + +    S  +RVWHARL+ N    C +
Sbjct:   44 FTIAIQSQPSSRYPSIWYPELVCRGSFSSTSSPHSNASFPEAVLRDAYLDRRPASLRQAFGKHGPLPKQRVVLAISAHLSVRLEESEATVRLANAPNVRVSIDDVREIESTSKEKAFEYAPGRTTKRGHEVAEWQVIITLRSTYFRRDFEQHLRNLAGDPLVQLKLQLSLSHFDGNNSTFEPRLSLGCIFGWDVPEIIQRHAPADIDRLQQPSSAVLLCANSLSGNKKLQNRSHAEVAHWAARALRGPVRFDIVVLPVIVDISAAECSPNDLHCFEDTSRTNSVLFNSLAKNVAQELQRIGVAEEVFERVVLIPFCRLGAHVLGFEHNNPCSGSQRYGQIQVTFMPYSVLAKYFKWASMYDLDEYIAPHHEKG-VASPLNTNASDLFDHILHENYHIKSPAFVIPWLNFRIRRQDLVNITHELMHGVTPVLVS----PSNGD---------TNCYRLPRHRIGKAVVRYDVGLGFSIHQPIVQIPGMGLQHNRKETRVDSMDIRVWHARLYKNRFSNCSF 549          
BLAST of Gchil9192.t1 vs. uniprot
Match: A0A2V3IGX3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGX3_9FLOR)

HSP 1 Score: 265 bits (678), Expect = 7.090e-78
Identity = 173/538 (32.16%), Postives = 271/538 (50.37%), Query Frame = 0
Query:   44 PVALGRRSYRGRPSILLPNHTCIGTFSSATSEFSDKGFPDALLRDAYLDLRLASQRDARHRHGTLATQRIMVAVTLHLSVQIQTKNVTVRV----RNAAGLKAFVDDVREIESHSKGSEFEYVPGKTTTRGFEVYEWQLIVTLQAKNNSS-----DFEEYVRSLADDARSGIDLEIPLERFDGKKLWFRPKFAFGCVFGWDAAA-------VMSAHAASSGSDSS--AVLFCANSLSGRKKEQDSFHGEIAHWAARSLQGVVRFDAVVLPIIVDRSMSE----CSTDDKGCMREASRLNRKLFERVSDNVVAELDKIGVEDEVYKQIVLIPFCRLGTHATGMERRDACSASQRYGQMHNTLMPYALLGKFYKWATLYDLDEYIAMTDGKGPMQHTQRVRAGALFDDMLRESEHMTKAAFTIAWLNFQILRRDVSSITHEVLRGRSQTLVPAASMPSSXXXXXXXXXXXSECYDTQRVPTGKAVVRRDVGLGFTVHQPLVHLRARHLAHV-KWQVSCRSERVRVWHARLFHNPLGACMY 558
            P  +GR S     +I  P   C G F+SA + F++  FP A++RDA +D R  S+   R  H      RI++ V++HLS+ +  +    ++      +  L+A VD V  ++         Y PGK T RG ++ EWQ+ V+++   ++S     +F   +R+L+ ++R  + L +PL+RFDG    F P F  GC  GW+ ++       +       SG+  S  A+LF  ++L G+KK    ++ E+AH+AAR+L G +RF  V + I+V+ S S+    C +D + C       N +L E V   V    +++ VE +++  ++L+PFCRLG+ A G E  DAC +S RYGQ H T   YA+L  FYKWA  YDLDE+IA T      +  Q+  A    D + R S +M       +WLNF +       +T  ++ G+   L                     ECY      TGK+ VR D GLGFT+H+P++  +  +   + + Q    S+ +R WH R F +  G C +
Sbjct:   52 PETVGRFSGNASVTIWSPTVRCTGKFASAPASFAEPSFPSAVIRDAVIDHRYLSKEQFRTVHPNAPYLRIILYVSVHLSLSLTRRGAVAQMLVQGAPSPSLRAHVDYVVRVDPFLMLGP--YKPGKKTKRGHQISEWQVAVSIRPTGDNSNLHQREFLRQIRTLSQESRGELSLVLPLKRFDGVTERFSPSFDLGCATGWELSSSYPKIPLLNKEPVCHSGARKSKGAILFSGSALYGKKKVNPEYYSEVAHFAARALNGPLRFQNVAMSIVVNNSYSDRELACGSD-RNCHAIMQEKNSQLLEDVRRVVEQVFEELRVERKLWSNLILLPFCRLGSDANGTEASDACRSSHRYGQYHATFFSYAMLSPFYKWAVSYDLDEFIANTPSSKGAKFVQQ-DASRTLDSVNRHSGYMF-----FSWLNFLVKDNSSIELTKHIMSGKRPEL----------------KGRGKECYAFTNDRTGKSAVRCDTGLGFTIHRPVIRKKNPNPTILDQIQGEHWSKSLRTWHPR-FGSSRGKCHF 563          
The following BLAST results are available for this feature:
BLAST of Gchil9192.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IM97_9FLOR1.080e-15646.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGX3_9FLOR7.090e-7832.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..490
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..567
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..15
NoneNo IPR availableTMHMMTMhelixcoord: 16..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2428190..2429893 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9192.t1Gchil9192.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2428190..2429893 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9192.t1 ID=Gchil9192.t1|Name=Gchil9192.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=568bp
MSHTLQTPSLFLKAKVIRAVLLVFSTLLIVIYFKPIPLSLRTFPVALGRR
SYRGRPSILLPNHTCIGTFSSATSEFSDKGFPDALLRDAYLDLRLASQRD
ARHRHGTLATQRIMVAVTLHLSVQIQTKNVTVRVRNAAGLKAFVDDVREI
ESHSKGSEFEYVPGKTTTRGFEVYEWQLIVTLQAKNNSSDFEEYVRSLAD
DARSGIDLEIPLERFDGKKLWFRPKFAFGCVFGWDAAAVMSAHAASSGSD
SSAVLFCANSLSGRKKEQDSFHGEIAHWAARSLQGVVRFDAVVLPIIVDR
SMSECSTDDKGCMREASRLNRKLFERVSDNVVAELDKIGVEDEVYKQIVL
IPFCRLGTHATGMERRDACSASQRYGQMHNTLMPYALLGKFYKWATLYDL
DEYIAMTDGKGPMQHTQRVRAGALFDDMLRESEHMTKAAFTIAWLNFQIL
RRDVSSITHEVLRGRSQTLVPAASMPSSPSTPSPSTPSTSECYDTQRVPT
GKAVVRRDVGLGFTVHQPLVHLRARHLAHVKWQVSCRSERVRVWHARLFH
NPLGACMYQRYISKPQT*
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