Gchil9188.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9188.t1
Unique NameGchil9188.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length200
Homology
BLAST of Gchil9188.t1 vs. uniprot
Match: A0A2V3IQ98_9FLOR (Superoxide dismutase [Cu-Zn] n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ98_9FLOR)

HSP 1 Score: 265 bits (678), Expect = 7.650e-88
Identity = 131/192 (68.23%), Postives = 154/192 (80.21%), Query Frame = 0
Query:    4 SLLSLCVMLLSSSLTC--AQPIYWKIPCLAQLPLTCHFIPTAGNNVTGTVFFTPFFNQKATTENRCFVRITANISGLSQGPHGFHIHTYGDIQSHDGASTGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKLRGITGRGMIVHALEDMGSGAQPSGAAGPRQARCVIGFANPGYI 193
            S+ +L + LL+  L+C  A P YWK PCL+Q  LTC+F PTAG+NVTG+V F+P F +KA + NRCFVRITA ++ LS G HGFHIHTYGDI+S DG STGGHFS+PSG  R+HALPG++PRHWGDFGS+ A  +GTA+YDRVDY IKLRGI GRGMIVHALED G  AQPSG AG RQARCVIG ANP Y+
Sbjct:    2 SISTLPLFLLAVLLSCSAASPFYWKKPCLSQPSLTCYFTPTAGHNVTGSVQFSPLFMRKARSRNRCFVRITAKLNNLSPGYHGFHIHTYGDIRSSDGKSTGGHFSNPSGIARQHALPGDWPRHWGDFGSLEAAGDGTATYDRVDYIIKLRGIVGRGMIVHALEDKGKEAQPSGGAGSRQARCVIGIANPDYM 193          
BLAST of Gchil9188.t1 vs. uniprot
Match: A0A2V3IPW2_9FLOR (Superoxide dismutase [Cu-Zn] n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPW2_9FLOR)

HSP 1 Score: 179 bits (453), Expect = 2.220e-53
Identity = 85/174 (48.85%), Postives = 116/174 (66.67%), Query Frame = 0
Query:   22 PIYWKIPCLAQLPLTCHFIPTAGNNVTGTVFFTPFFNQKATTENR--CFVRITANISGLSQGPHGFHIHTYGDIQSHDGASTGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKLRGITGRGMIVHALEDMGSGAQPSGAAGPRQARCVIGFANPGYI 193
            P + +  C A   L C+  PT GN V+GTV+ TP ++Q++       C+ R+TA+I+GL    HGFH HTYGD+ S DG STGGHF++P+G+D +H  PG+  RHWGDFG++   A+G A YDR+D  I+L G+ GR + +HA +D G   QPSG AG R A CVIG+ANP  +
Sbjct:   43 PSFSESTCSALPTLICNVQPTDGNQVSGTVYLTPIWSQRSADSQSFACYTRVTASIAGLPGPKHGFHAHTYGDLSSADGKSTGGHFTNPAGTDAQHGYPGDATRHWGDFGNLHVGADGIAEYDRIDDVIRLGGMVGRSITIHAEDDKGVEEQPSGGAGSRVAYCVIGYANPAVV 216          
BLAST of Gchil9188.t1 vs. uniprot
Match: A0A6M1T157_9BACT (Superoxide dismutase family protein n=1 Tax=Aliifodinibius halophilus TaxID=1736908 RepID=A0A6M1T157_9BACT)

HSP 1 Score: 123 bits (309), Expect = 4.810e-32
Identity = 73/154 (47.40%), Postives = 97/154 (62.99%), Query Frame = 0
Query:   42 TAGNNVTGTVFFTPFFNQKATTENRCFVRITANISGLSQGPHGFHIHTYGDIQSHDGASTGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKLRG---ITGRGMIVHA-LEDMGSGAQPSGAAGPRQARCVIGFANPG 191
            TAGN V+GTV F         T+    VR+ A++SGLS+G HGFH+H YGD ++ DG S GGH++    +D KHA P    RH GD G++ A A+G A+ D +D TI+L G   I GRG+++H   +D+ S  QPSGAAGPR    V+G AN G
Sbjct:   50 TAGNEVSGTVTF---------TKKEKGVRVQADLSGLSEGKHGFHVHQYGDCRADDGTSAGGHYNP---ADNKHAGPDAESRHVGDMGNIEADADGNATIDYMDSTIELNGADSIIGRGVVLHGGADDLES--QPSGAAGPRVGCGVVGIANTG 189          
BLAST of Gchil9188.t1 vs. uniprot
Match: A0A2P8C975_9BACT (Cu-Zn family superoxide dismutase n=3 Tax=Prolixibacter TaxID=314318 RepID=A0A2P8C975_9BACT)

HSP 1 Score: 119 bits (299), Expect = 1.560e-30
Identity = 76/174 (43.68%), Postives = 98/174 (56.32%), Query Frame = 0
Query:   20 AQPIYWKIPCLAQLPLTCHFIPTAGNNVTGTVFFTPFFNQKATTENRCFVRITANISGLSQGPHGFHIHTYGDIQSHDGASTGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKLRG---ITGRGMIVHALEDMGSGAQPSGAAGPRQARCVIGFANP 190
            A P   K  C+ Q        PT GN+VTGTV FT              V++ A++ GL+ G HGFH+H YGDI + DG STGGHF+  + +   H  P    RH GD G++VA A+ T  Y R+D  +KL G   + GR +IVHA ED  + +QP+GAAG R A  VIG A P
Sbjct:   39 ATPEVTKAVCVLQ--------PTEGNHVTGTVTFTKVDGG---------VQVVADLEGLAPGKHGFHVHQYGDISAADGTSTGGHFNPENVN---HGGPDADVRHVGDLGNIVAAADSTGHYQRIDKMVKLNGPHSVIGRAIIVHAGEDDLT-SQPTGAAGSRVAEGVIGIAKP 191          
BLAST of Gchil9188.t1 vs. uniprot
Match: UPI00110812FE (superoxide dismutase family protein n=1 Tax=Aliifodinibius saliphilus TaxID=1920650 RepID=UPI00110812FE)

HSP 1 Score: 118 bits (296), Expect = 2.680e-30
Identity = 73/152 (48.03%), Postives = 95/152 (62.50%), Query Frame = 0
Query:   42 TAGNNVTGTVFFTPFFNQKATTENRCFVRITANISGLSQGPHGFHIHTYGDIQSHDGASTGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKLRG---ITGRGMIVHA-LEDMGSGAQPSGAAGPRQARCVIGFAN 189
            T+ N V+GTV FT   N          VR+ A +SGLS+G HGFHIH YGD +++DG S GGH++    +D KHA P    RH GD G++ A A+G A+ + VD TI+L G   I GRG+++H   +D+ S  QPSGAAGPR    VIG AN
Sbjct:   33 TSDNEVSGTVTFTQEENG---------VRVQAELSGLSEGMHGFHIHQYGDCRANDGTSAGGHYNP---ADNKHAGPDAESRHVGDMGNIEADADGNATINYVDSTIELNGADSIIGRGVVLHGGADDLES--QPSGAAGPRVGCGVIGIAN 170          
BLAST of Gchil9188.t1 vs. uniprot
Match: A0A521D4F7_9BACT (Superoxide dismutase, Cu-Zn family n=2 Tax=Aliifodinibius sediminis TaxID=1214077 RepID=A0A521D4F7_9BACT)

HSP 1 Score: 117 bits (294), Expect = 9.730e-30
Identity = 69/149 (46.31%), Postives = 91/149 (61.07%), Query Frame = 0
Query:   41 PTAGNNVTGTVFFTPFFNQKATTENRCFVRITANISGLSQGPHGFHIHTYGDIQSHDGASTGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKLRGITGRGMIVHALEDMGSGAQPSGAAGPRQARCVIGFAN 189
            PT GN  +GTV F         T+    V++ A ++GL++G HGFHIH YGD  + DG S GGHF+ P+ +D  HA P    RH GD G++ A A+G A+ D VD TI +  I GRG+I+H  ED    +QP+GAAGPR    VIG A+
Sbjct:   59 PTEGNEASGTVTF---------TKTADGVQVQAEVTGLAEGKHGFHIHQYGDCTAADGTSAGGHFN-PASND--HAGPTAESRHMGDMGNIEADADGNATIDYVDSTIDINQIIGRGIIIHGGED-DLESQPTGAAGPRMGCGVIGIAS 194          
BLAST of Gchil9188.t1 vs. uniprot
Match: A0A3M1XPC1_9BACT (Superoxide dismutase [Cu-Zn] n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M1XPC1_9BACT)

HSP 1 Score: 115 bits (287), Expect = 9.000e-29
Identity = 72/153 (47.06%), Postives = 88/153 (57.52%), Query Frame = 0
Query:   41 PTAGNNVTGTVFFTPFFNQKATTENRCFVRITANISGLSQGPHGFHIHTYGDIQSHDGASTGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKLRG---ITGRGMIVHALEDMGSGAQPSGAAGPRQARCVIGFANP 190
            PT GNNV G V F               V ITA+++GL  GPHGFHIH YGD  S DG S GGHF+ P+G   KH  P    RH GD G+++A  NG A Y R+D  +KL G   I GRG+I+H   D  + +QP+G AG R A  VIG + P
Sbjct:   49 PTEGNNVRGVVSFVILEGG---------VMITADVTGLPPGPHGFHIHQYGDCTSPDGKSAGGHFN-PTGE--KHGAPDSLHRHVGDLGNLIADENGEAHYKRLDTVLKLVGPTSIIGRGIIIHEKADDFT-SQPTGNAGARLACGVIGISKP 188          
BLAST of Gchil9188.t1 vs. uniprot
Match: UPI001965657D (superoxide dismutase family protein n=1 Tax=Desulfopila inferna TaxID=468528 RepID=UPI001965657D)

HSP 1 Score: 115 bits (287), Expect = 9.240e-29
Identity = 74/152 (48.68%), Postives = 91/152 (59.87%), Query Frame = 0
Query:   41 PTAGNNVTGTVFFTPFFNQKATTENRCFVRITANISGLSQGPHGFHIHTYGDIQSHDGASTGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKLRG---ITGRGMIVHALEDMGSGAQPSGAAGPRQARCVIGFAN 189
            PT GN  +GTV FT              +RI A++SGL +G HGFHIH YGD  + DG S GGHF+ P+GS   HA P + PRH GD G+V   A+GTASY RVD  I  +G   I G  +IVH  +D  S +QP+G AG R +  VIG AN
Sbjct:   47 PTEGNTSSGTVTFTKVEEG---------IRIEADLSGLREGMHGFHIHEYGDCTAADGTSAGGHFN-PAGS--PHAGPEDSPRHAGDLGNVTVGADGTASYSRVDDIISFQGDHNILGHAVIVHEKKDDLS-SQPTGDAGGRLSCGVIGIAN 185          
BLAST of Gchil9188.t1 vs. uniprot
Match: A0A1M4YAK6_9BACT (Superoxide dismutase, Cu-Zn family n=2 Tax=Aliifodinibius roseus TaxID=1194090 RepID=A0A1M4YAK6_9BACT)

HSP 1 Score: 112 bits (279), Expect = 1.930e-27
Identity = 72/152 (47.37%), Postives = 90/152 (59.21%), Query Frame = 0
Query:   41 PTAGNNVTGTVFFTPFFNQKATTENRCFVRITANISGLSQGPHGFHIHTYGDIQSHDGASTGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKLRG---ITGRGMIVHALEDMGSGAQPSGAAGPRQARCVIGFAN 189
            PT GN  +GTV FT      AT +    V++ A I G+ +G HGFHIH YGD  + DG S GGH++ P G++  HA P    RH GD G++ A A G A+ D VD  I L G   I G G+I+HA ED    +QP+GAAGPR    VIG AN
Sbjct:   60 PTEGNEASGTVTFT------ATGDG---VQVQAEIEGIEEGKHGFHIHQYGDCTAPDGTSAGGHYN-PEGTE--HAGPDADTRHVGDMGNIEADAEGVATKDYVDSKITLNGPNSIIGHGIIIHAGED-DLESQPTGAAGPRLGCGVIGIAN 198          
BLAST of Gchil9188.t1 vs. uniprot
Match: A0A3N5EIM6_9BACT (Superoxide dismutase [Cu-Zn] n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A3N5EIM6_9BACT)

HSP 1 Score: 110 bits (276), Expect = 3.380e-27
Identity = 72/153 (47.06%), Postives = 84/153 (54.90%), Query Frame = 0
Query:   37 CHFIPTAGNNVTGTVFFTPFFNQKATTENRCFVRITANISGLSQGPHGFHIHTYGDIQSHDGASTGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKLRG---ITGRGMIVHALEDMGSGAQPSGAAGPRQARCVIG 186
            C   PT GNNV+GT+ F               VR+ ANI GL+QG HGFHIH  GD  + DG+S GGHF+ P G  + H  P E  RH GD G++ A ANG A  D  D  I L G   I GR MI+H  ED     QP+G AG R A  VIG
Sbjct:   40 CVLYPTQGNNVSGTITF---------ETTGIGVRVVANIHGLTQGKHGFHIHECGDCSAADGSSAGGHFN-PMG--KSHGSPMEMMRHTGDMGNIEADANGDAHLDYTDNMISLSGEYSIIGRSMIIHKAED-DLKTQPTGNAGARIACGVIG 179          
The following BLAST results are available for this feature:
BLAST of Gchil9188.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQ98_9FLOR7.650e-8868.23Superoxide dismutase [Cu-Zn] n=1 Tax=Gracilariopsi... [more]
A0A2V3IPW2_9FLOR2.220e-5348.85Superoxide dismutase [Cu-Zn] n=1 Tax=Gracilariopsi... [more]
A0A6M1T157_9BACT4.810e-3247.40Superoxide dismutase family protein n=1 Tax=Aliifo... [more]
A0A2P8C975_9BACT1.560e-3043.68Cu-Zn family superoxide dismutase n=3 Tax=Prolixib... [more]
UPI00110812FE2.680e-3048.03superoxide dismutase family protein n=1 Tax=Aliifo... [more]
A0A521D4F7_9BACT9.730e-3046.31Superoxide dismutase, Cu-Zn family n=2 Tax=Aliifod... [more]
A0A3M1XPC1_9BACT9.000e-2947.06Superoxide dismutase [Cu-Zn] n=1 Tax=Calditrichaeo... [more]
UPI001965657D9.240e-2948.68superoxide dismutase family protein n=1 Tax=Desulf... [more]
A0A1M4YAK6_9BACT1.930e-2747.37Superoxide dismutase, Cu-Zn family n=2 Tax=Aliifod... [more]
A0A3N5EIM6_9BACT3.380e-2747.06Superoxide dismutase [Cu-Zn] n=1 Tax=Bacteroidales... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001424Superoxide dismutase, copper/zinc binding domainPFAMPF00080Sod_Cucoord: 48..185
e-value: 1.2E-28
score: 100.2
IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamilyGENE3D2.60.40.200Superoxide dismutase, copper/zinc binding domaincoord: 35..185
e-value: 1.2E-33
score: 118.4
IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamilySUPERFAMILY49329Cu,Zn superoxide dismutase-likecoord: 37..186
IPR024134Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperonePANTHERPTHR10003SUPEROXIDE DISMUTASE CU-ZN -RELATEDcoord: 40..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..199
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2387884..2388483 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9188.t1Gchil9188.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2387884..2388483 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9188.t1 ID=Gchil9188.t1|Name=Gchil9188.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=200bp
MIFSLLSLCVMLLSSSLTCAQPIYWKIPCLAQLPLTCHFIPTAGNNVTGT
VFFTPFFNQKATTENRCFVRITANISGLSQGPHGFHIHTYGDIQSHDGAS
TGGHFSDPSGSDRKHALPGEYPRHWGDFGSVVATANGTASYDRVDYTIKL
RGITGRGMIVHALEDMGSGAQPSGAAGPRQARCVIGFANPGYIPPSLFH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001424SOD_Cu_Zn_dom
IPR036423SOD-like_Cu/Zn_dom_sf
IPR024134SOD_Cu/Zn_/chaperone