Gchil9180.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9180.t1
Unique NameGchil9180.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length417
Homology
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BLAST of Gchil9180.t1 vs. uniprot
Match: A0A2V3IR74_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR74_9FLOR)

HSP 1 Score: 386 bits (991), Expect = 4.450e-130
Identity = 185/266 (69.55%), Postives = 222/266 (83.46%), Query Frame = 0 
Query:   73 VLGVPDNTTEYEGIQLDAIVTIVETEVPLRNSTQAAQRALPACTGIFISSTQILSSAHCVYHQRQDKGGEPYWMYGDDNPHNTFLYAITGKVNAVDKTFNVYKLVRGCIPQSYIDAENEEVTSVMGNDLVVFDIEGQFVGNPMSIGAMAPSVVYDIAKDYMLPQYPSDFNDGRSLVIDKNTTPIRFESLGSGMFFSIDLASWSGSSGGPIIDMIATRITGRPTIVGVLMSSGWGICDSGIVPVTTGIPIVQELVRIAS--KTRNAN 336
            +L VPD+ T YEG+ L  +VTIVETEVPL  S  AAQRALPACTG+F+S TQI+SSAHCV+H++QD+  EPYWM+GD N HNTFLYAI GKV+A D +F+VYKLV GC+PQSY+DAE+E+ TS MGNDLVVF++EG F G+  SIG +A S+VYDI ++Y+LPQYPSD ++GRSLVID NTTPI FE LG G+FFSIDLASWSGSSGGPIID+ ATR +GRP +VGVLMSSGW +CDSGIVPVTT IP+VQEL+  AS  + RN N
Sbjct:    1 MLNVPDSATHYEGVPLGGVVTIVETEVPLHESIAAAQRALPACTGMFVSPTQIISSAHCVFHRKQDESEEPYWMFGDGNLHNTFLYAIAGKVDAEDNSFDVYKLVTGCVPQSYVDAESEDATSSMGNDLVVFEVEGNFTGDLSSIGNIANSIVYDIPRNYLLPQYPSDVDEGRSLVIDMNTTPIVFEPLGDGVFFSIDLASWSGSSGGPIIDVNATRSSGRPCVVGVLMSSGWSVCDSGIVPVTTAIPLVQELLTTASIAQKRNGN 266
The following BLAST results are available for this feature:
BLAST of Gchil9180.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IR74_9FLOR4.450e-13069.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 100..218
e-value: 8.5E-8
score: 34.3
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 97..299
e-value: 8.5E-8
score: 34.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..416
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..416
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 109..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2273451..2274819 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9180.t1Gchil9180.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2273451..2274819 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9180.t1 ID=Gchil9180.t1|Name=Gchil9180.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=417bp
MKVLILFMVGVFMVSCRAQIACRLQTLTDFDDADPLVVSLNLRRSTFRRR
RGPNPFSALLQRSIVQCRSSVEVLGVPDNTTEYEGIQLDAIVTIVETEVP
LRNSTQAAQRALPACTGIFISSTQILSSAHCVYHQRQDKGGEPYWMYGDD
NPHNTFLYAITGKVNAVDKTFNVYKLVRGCIPQSYIDAENEEVTSVMGND
LVVFDIEGQFVGNPMSIGAMAPSVVYDIAKDYMLPQYPSDFNDGRSLVID
KNTTPIRFESLGSGMFFSIDLASWSGSSGGPIIDMIATRITGRPTIVGVL
MSSGWGICDSGIVPVTTGIPIVQELVRIASKTRNANAKEKKTESLPVTSN
KPRPEQESEENLTPEEGSPEPFEMLTMGGTEEPDENDILPTPSNGEEMTI
HRSPGEHMAAWGYHEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043504Peptidase_S1_PA_chymotrypsin
IPR009003Peptidase_S1_PA