Gchil9147.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9147.t1
Unique NameGchil9147.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length225
Homology
BLAST of Gchil9147.t1 vs. uniprot
Match: A0A2V3IF45_9FLOR (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF45_9FLOR)

HSP 1 Score: 281 bits (720), Expect = 2.050e-93
Identity = 145/225 (64.44%), Postives = 169/225 (75.11%), Query Frame = 0
Query:    1 MKPQAFFTFFGVAMFIQQAAAQCTGSAMYEVVFSNLLTPENFAFIPNFPETGVNFSPLAGVAHSNRLSFLTVRGLASPQVEQIAETGMNGRFIKAAEHLMG--KGVKTVASGMGATPGTNQSVTLTVDCENPFITALSMAAPSPDWIVQVNNEDTLGMNRTFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIAPLVEDPTDPFGGKIIGKYVIRRL 223
            M     F    +   I Q+ A C+G A+Y+V+F+N+LTP+ F      PETG+NFSPLA V+HSNR SFLTVRG ASPQVEQIAETGMNGRF+  AE+L G  +GV+ VA GMGA PG NQ+V LTV+CENPFITALSM APSPDWIVQVNN +TL MN  F   + GNLIAYDAGTDDG  FTA +DAS DMPSEP KNIAPL ED TDPF G+++G YV  R+
Sbjct:    1 MSSIILFPILAIYALIGQSQAMCSGEAVYQVIFNNMLTPQTFG--SKIPETGLNFSPLAAVSHSNRQSFLTVRGFASPQVEQIAETGMNGRFLALAENLKGAEQGVRDVAGGMGAGPGMNQTVELTVNCENPFITALSMIAPSPDWIVQVNNMNTLDMNGEFRQRLGGNLIAYDAGTDDGGDFTAASDASFDMPSEPQKNIAPLFEDETDPFDGRMVGTYVFVRI 223          
BLAST of Gchil9147.t1 vs. uniprot
Match: A0A2V3IRW7_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRW7_9FLOR)

HSP 1 Score: 237 bits (604), Expect = 8.320e-76
Identity = 126/218 (57.80%), Postives = 155/218 (71.10%), Query Frame = 0
Query:    9 FFGVAMFIQQAAAQCTGSAMYEVVFSNLLTPENFAFIPNFPETGVNFSPLAGVAHSNRLSFLTVRGLASPQVEQIAETGMNGRFIKAAEHLMGKG-VKTVASGMGAT-PGTNQSVTLTVDCENPFITALSMAAPSPDWIVQVNNEDTLGMNRTFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIAPLVEDPTDPFGGKIIGKYVIRRLD 224
            F  +A+F     + C+G A+Y+V F+NLLTPENF  +   P TG+ FSPLAG +HSNR SF T+RG ASPQVEQIAETG NGRF+  A +L+  G V++VAS  G T PGT  S+  TVDC  PFIT L M APSPDWIVQ+NN +    +  F+    G LIAYD GTDDG  FT+P DASLD+P+EP KNIAPLVED TD F G+IIG + IR+++
Sbjct:    9 FLTLALFEAAVGSGCSGQAVYQVSFTNLLTPENFGEL--IPSTGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVAQATNLVPTGKVRSVASADGPTMPGTTTSLLFTVDCARPFITMLGMVAPSPDWIVQINNRNMF-RDGMFISSENGTLIAYDTGTDDGREFTSPVDASLDIPTEPQKNIAPLVEDETDRFEGRIIGTFDIRKVE 223          
BLAST of Gchil9147.t1 vs. uniprot
Match: A0A2V3IUA8_9FLOR (Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA8_9FLOR)

HSP 1 Score: 234 bits (597), Expect = 1.020e-74
Identity = 124/222 (55.86%), Postives = 164/222 (73.87%), Query Frame = 0
Query:    8 TFFGVAMFIQQAAA---QCTGSAMYEVVFSNLLTPENFAFIPNFPETGVNFSPLAGVAHSNRLSFLTVRGLASPQVEQIAETGMNGRFIKAAEHL--MGKGVKTVASGMGAT-PGTNQSVTLTVDCENPFITALSMAAPSPDWIVQVNNEDTLGMNRTFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIAPLVEDPTDPFGGKIIGKYVIRRL 223
            T F +++ + QA A   +C G A+Y+V F NLLTP NF  +   P+ G+ FSPLAG +HSNR+SFLT+RG ASPQVEQIAETG NGRF+  A++L    +GV++VAS  G T PG + ++  TVDC +PFIT L M APSPDWIVQ+NN + +   + F+   +G +IAYDAGTDDG  FT+P DASLDMP+EP KNIAPLVED TD F G+I+G+++I+++
Sbjct:    6 TAFLLSLALFQAVAAERRCRGKAIYKVTFRNLLTPANFGKL--IPDNGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVALAKNLRRQRRGVRSVASAKGPTMPGKSTTLFYTVDCAHPFITMLGMIAPSPDWIVQINNRNMVRDGK-FITRDSGTMIAYDAGTDDGREFTSPVDASLDMPTEPQKNIAPLVEDETDRFQGRIVGRFLIQKI 224          
BLAST of Gchil9147.t1 vs. uniprot
Match: A0A2V3IRX9_9FLOR (Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX9_9FLOR)

HSP 1 Score: 233 bits (593), Expect = 5.920e-74
Identity = 124/204 (60.78%), Postives = 145/204 (71.08%), Query Frame = 0
Query:   23 CTGSAMYEVVFSNLLTPENFAFIPNFPETGVNFSPLAGVAHSNRLSFLTVRGLASPQVEQIAETGMNGRFIKAAEHLMG--KGVKTVASGMGAT-PGTNQSVTLTVDCENPFITALSMAAPSPDWIVQVNNEDTLGMNRTFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIAPLVEDPTDPFGGKIIGKYVIRRL 223
            C+G A Y V F+N LTP  F      P+TG+ +SPLAG +HSNR+S LTVR LASPQVEQIAETG NGRF+  AEHL    +GVKTVA   G T PG + ++  TVDCE+PFIT + M APSPDW+VQV N + +   R F+       IAYDAGTDDG  FT+P DASLDMPSEP KNIAPLVED TDPF G+ IG Y IRR+
Sbjct:   35 CSGQAEYVVNFTNFLTPRRFG--RRIPKTGLVYSPLAGASHSNRVSLLTVRSLASPQVEQIAETGQNGRFVALAEHLRDTEQGVKTVAGADGPTMPGNSTTLRFTVDCEHPFITVVGMIAPSPDWLVQVGNVNLVRRGR-FISFRXXXXIAYDAGTDDGAEFTSPTDASLDMPSEPQKNIAPLVEDDTDPFNGRFIGVYTIRRV 235          
BLAST of Gchil9147.t1 vs. uniprot
Match: A0A2V3IRX0_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRX0_9FLOR)

HSP 1 Score: 229 bits (585), Expect = 6.350e-73
Identity = 122/217 (56.22%), Postives = 149/217 (68.66%), Query Frame = 0
Query:    9 FFGVAMFIQQAAAQCTGSAMYEVVFSNLLTPENFAFIPNFPETGVNFSPLAGVAHSNRLSFLTVRGLASPQVEQIAETGMNGRFIKAAEHLMGKG-VKTVASGMGAT-PGTNQSVTLTVDCENPFITALSMAAPSPDWIVQVNNEDTLGMNRTFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIAPLVEDPTDPFGGKIIGKYVIRRL 223
            F  +A+F   A + C+G A+Y V F+NLLT ENF  +   P  G+ FSPLAG +HSNR SF T+RG ASPQVEQIAETG NGRF+  A+++   G V TVA+  G + PGT+ S+   VDC  PFIT L M APSPDWIVQ+NN +    N  F+P   G LIAYD GTDDG  FT P DASLDMP+EP  NI PLVED TD F G+I+G++ I R+
Sbjct:    9 FLSLALFQAVAESACSGRAVYRVTFTNLLTAENFGDL--IPPNGLVFSPLAGASHSNRFSFFTIRGFASPQVEQIAETGQNGRFVTQAKNMQRTGKVFTVAAADGPSLPGTDTSLFFAVDCARPFITMLGMIAPSPDWIVQINNRNMF-RNGMFIPRENGTLIAYDTGTDDGREFTPPGDASLDMPTEPQMNIVPLVEDETDRFEGRIVGRFNIMRI 222          
BLAST of Gchil9147.t1 vs. uniprot
Match: A0A2V3IS06_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS06_9FLOR)

HSP 1 Score: 228 bits (581), Expect = 2.740e-72
Identity = 120/208 (57.69%), Postives = 148/208 (71.15%), Query Frame = 0
Query:   19 AAAQCTGSAMYEVVFSNLLTPENFAFIPNFPETGVNFSPLAGVAHSNRLSFLTVRGLASPQVEQIAETGMNGRFIKAAEHLM--GKGVKTVASGMGAT-PGTNQSVTLTVDCENPFITALSMAAPSPDWIVQVNNEDTLGMNRTFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIAPLVEDPTDPFGGKIIGKYVIRRL 223
            A   CTG A+Y V F NLLTPENF  +   PETG+ FSPLAG +HSNR+SF T+RG ASPQVEQIAETG NGRF++ A +L    +GV +V++  G T PG   ++   VDC +PFIT L M APSPDWIVQ+NN   +  +  F+    G LIAYD GTDDG  FT+P DASLDMP+EP +NIAPLVED TD F G+I+G + I+R+
Sbjct:   20 AEGHCTGRALYRVTFRNLLTPENFGDL--IPETGLVFSPLAGASHSNRISFFTIRGFASPQVEQIAETGQNGRFVRLARNLKYSRRGVLSVSAANGPTMPGNTTTLYFFVDCAHPFITMLGMIAPSPDWIVQLNNRPLI-RDGEFISGENGTLIAYDTGTDDGREFTSPVDASLDMPTEPQQNIAPLVEDETDRFEGRIVGMFYIQRV 224          
BLAST of Gchil9147.t1 vs. uniprot
Match: A0A2V3IT76_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT76_9FLOR)

HSP 1 Score: 226 bits (575), Expect = 2.230e-71
Identity = 118/208 (56.73%), Postives = 148/208 (71.15%), Query Frame = 0
Query:   19 AAAQCTGSAMYEVVFSNLLTPENFAFIPNFPETGVNFSPLAGVAHSNRLSFLTVRGLASPQVEQIAETGMNGRFIKAAEHL--MGKGVKTVASGMGAT-PGTNQSVTLTVDCENPFITALSMAAPSPDWIVQVNNEDTLGMNRTFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIAPLVEDPTDPFGGKIIGKYVIRRL 223
            A   C+G A+Y V F NLLTP+NF  +   PE G+ FSPLAG +HSNR+SFLT+RG ASPQVEQIAETG NGRF+  A +L   G+GV  VA+  G T PG   ++   VDC +PFIT L M APSPDWIVQ+NN + +   + F+   +G LIAYD GTD G  FT+P DASLDMP+EP  NIAPLVED TD F G+++G++ I+R+
Sbjct:   20 ADGHCSGKAIYRVSFQNLLTPKNFGNL--IPENGLVFSPLAGASHSNRISFLTIRGFASPQVEQIAETGQNGRFVTLARNLRRQGRGVLHVAAAKGPTMPGNFTNLFYAVDCAHPFITMLGMIAPSPDWIVQINNRNMIRDGK-FITRESGTLIAYDVGTDSGREFTSPVDASLDMPTEPQMNIAPLVEDETDRFQGRVVGRFHIQRI 224          
BLAST of Gchil9147.t1 vs. uniprot
Match: A0A2V3IT49_9FLOR (Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT49_9FLOR)

HSP 1 Score: 216 bits (550), Expect = 1.370e-67
Identity = 118/205 (57.56%), Postives = 145/205 (70.73%), Query Frame = 0
Query:   22 QCTGSAMYEVVFSNLLTPENFAFIPNFPETGVNFSPLAGVAHSNRLSFLTVRGLASPQVEQIAETGMNGRFIKAAEHLMGK--GVKTVASGMGAT-PGTNQSVTLTVDCENPFITALSMAAPSPDWIVQVNNEDTLGMNRTFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIAPLVEDPTDPFGGKIIGKYVIRRL 223
            +C+G A+Y V F NLLTPENF  +   P+ G+ FSPL G +HS+R+SFLTVRG AS QVEQIAETG N RF+  A +L  +  GV  VA+  G T PG   ++   VDC +PFIT L M APSPDWIVQ+NN + L   + FV    G LIAYDAGTDDG  FT P DAS+D PSEP KNIAPLVED TD F G+I+G+++I+R+
Sbjct:   23 RCSGRAVYRVSFHNLLTPENFGKL--IPQRGLVFSPLVGASHSHRISFLTVRGFASRQVEQIAETGDNSRFVTMARNLRSQRHGVLHVAAANGPTLPGKYTTLFYPVDCAHPFITMLGMIAPSPDWIVQINNRNMLRDGK-FVARDFGTLIAYDAGTDDGREFTIPADASVDKPSEPQKNIAPLVEDETDRFQGRIVGRFLIQRI 224          
BLAST of Gchil9147.t1 vs. uniprot
Match: A0A2V3IFK3_9FLOR (Spondin domain-containing protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFK3_9FLOR)

HSP 1 Score: 120 bits (300), Expect = 4.470e-31
Identity = 67/122 (54.92%), Postives = 81/122 (66.39%), Query Frame = 0
Query:  103 GVKTVASGMGAT-PGTNQSVTLTVDCENPFITALSMAAPSPDWIVQVNNEDTLGMNRTFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIAPLVEDPTDPFGGKIIGKYVIRRL 223
            GV  VA+  G T PG   +++  VDC +PFI  L M APSP+WIVQ NN + L  +  FV    G LIA DAGTDDG  FT P DAS D PSEP KNIAPLVED  D F  +I+GK++I+R+
Sbjct:   11 GVLHVAAANGPTLPGKYTTLSYPVDCSHPFIMMLGMIAPSPNWIVQTNNRNML-RDVKFVAGDFGTLIASDAGTDDGQEFTIPADASFDKPSEPQKNIAPLVEDEADRFERRIVGKFLIQRI 131          
BLAST of Gchil9147.t1 vs. uniprot
Match: A0A7S3ED79_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ED79_9RHOD)

HSP 1 Score: 95.5 bits (236), Expect = 1.670e-20
Identity = 65/205 (31.71%), Postives = 102/205 (49.76%), Query Frame = 0
Query:   22 QCTGSAMYEVVFSNLLTPENFAFIPNFPETGVNFSPLAGVAHSNRLSFLTVRGLASPQVEQIAETGMNGRFIKAAEHLMGKGVKTVASGMGATPGTNQSVTLTVDCENP--FITALSMAAPSPDWIVQVNNEDTLGMNR-TFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIAPLVEDPTDPFGGKIIGKYVIRRL 223
            +C G+A Y++ F    T       P+   +  +FSPL   +HS         G A+  VE +AETG   R     +  +G+ V   A     T   +++V++T+D +     ++A+SM APSPDWI    N D        F+  +TG L A+DAGT+DG  F+  N A+     +P + I  +++     FGG+ +G Y IR+L
Sbjct:   34 KCKGTATYKITFRYQWTRARH---PDAYPSSAHFSPLVAASHSPGYCMWKPYGFATRGVEDVAETGSTFRIDGELDEHLGRNVYDFAVDNVVTSDGSETVSVTIDVDGKRSLVSAISMIAPSPDWITGFYNIDVCDQTTGVFMKSLTGKLGAWDAGTEDGTNFSISNSAT-----DPTEQIEDILQSV---FGGRRLGSYRIRKL 227          
The following BLAST results are available for this feature:
BLAST of Gchil9147.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IF45_9FLOR2.050e-9364.44Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRW7_9FLOR8.320e-7657.80Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IUA8_9FLOR1.020e-7455.86Spondin-1 n=3 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRX9_9FLOR5.920e-7460.78Spondin-2 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IRX0_9FLOR6.350e-7356.22Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IS06_9FLOR2.740e-7257.69Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT76_9FLOR2.230e-7156.73Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IT49_9FLOR1.370e-6757.56Spondin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
A0A2V3IFK3_9FLOR4.470e-3154.92Spondin domain-containing protein n=2 Tax=Gracilar... [more]
A0A7S3ED79_9RHOD1.670e-2031.71Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009465Spondin, N-terminalPFAMPF06468Spond_Ncoord: 27..199
e-value: 9.8E-27
score: 94.3
IPR009465Spondin, N-terminalPROSITEPS51020SPONDINcoord: 17..209
score: 22.44165
IPR038678Spondin, N-terminal domain superfamilyGENE3D2.60.40.2130coord: 14..209
e-value: 5.2E-37
score: 129.5
NoneNo IPR availablePANTHERPTHR11311:SF16SPONDIN-1coord: 24..210
NoneNo IPR availablePANTHERPTHR11311SPONDINcoord: 24..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..224
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2074136..2074810 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9147.t1Gchil9147.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2074136..2074810 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9147.t1 ID=Gchil9147.t1|Name=Gchil9147.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=225bp
MKPQAFFTFFGVAMFIQQAAAQCTGSAMYEVVFSNLLTPENFAFIPNFPE
TGVNFSPLAGVAHSNRLSFLTVRGLASPQVEQIAETGMNGRFIKAAEHLM
GKGVKTVASGMGATPGTNQSVTLTVDCENPFITALSMAAPSPDWIVQVNN
EDTLGMNRTFVPMITGNLIAYDAGTDDGDMFTAPNDASLDMPSEPPKNIA
PLVEDPTDPFGGKIIGKYVIRRLD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009465Spondin_N
IPR038678Spondin_N_sf