Gchil9145.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9145.t1
Unique NameGchil9145.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length544
Homology
BLAST of Gchil9145.t1 vs. uniprot
Match: A0A2V3IFA6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFA6_9FLOR)

HSP 1 Score: 202 bits (513), Expect = 3.010e-55
Identity = 156/476 (32.77%), Postives = 224/476 (47.06%), Query Frame = 0
Query:   92 SALAKVSDRQG----LIGGLCSSDSQCQDPRQCVTIQ----QAAVVPCTPDSLICACFSPLLCSSGDDCDSGELCLSVANITGTVCVSEDVITSTNFTVAVSEGGSGTVSIEIPDSPQTQGLNGDLCSSQGDCTESRRCFTLMGANFISCSGQENCRCVARDPSCSSISDCSSGEVCQFLDADGSVGFCISALLVPGNPAAQTN-----ETAIEEEQHDLTDEMDMPIETHEFGVSCTTDDDCDIDE-SCTALGPTGRCTPDGNPSFGAGGEFPSASVGPIAVDADVESPTDEPGSE------FIGVTPTGDDSDLSESEE----PSGTFEDECQTNDDCEDGETCTASDGLSVCEAVLNGEEDVSVCISTHHLSHMKQEELLYLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVGCISKLKTVNSPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL 543
            +AL+ +  RQG    L G +CS++S C+  RQC+ ++    Q+ +  C      C CF+ ++C+S  DC+ GE+C  V+N    +C S          V +   G+ T S      P  + LN + CS   +C  SR C        I CS  + C C+  +  C S  DC  GE C+ +    S+   IS+L     P  Q N      T   +      +  D  +E      SC     C  ++ SC                        + S+GP+    D  +P  E G        F G +P    S  + +      P  T E+EC + ++C        S+G   C   +  +E   VCIS HHL HM + E+ Y THR+ARVLCD  NSCAT GH++ Y+   MMMSTYC+ VGC+ K+  VN  RY  G++V SNS GL F+  +ARYNT +EEK+L +A+RIGL
Sbjct:   21 AALSNIVSRQGEGTGLTGEVCSTNSDCRGTRQCIDVRAGASQSNITLCPFADSNCICFAFVVCNSNADCEKGEVCNEVSN--SRLCTSGK--------VPIVHAGTPTPSAR----PSDKKLNFERCSKSSECAGSRNCVVAENGELIQCSISDTCFCLTENFRCESTKDCDEGETCRGIGP--SLLCAISSL-----PGVQLNFEKCLATGDCKGPRTCAELRDGKLELCRNANSCF----CLTEKISCXXXXXXXXXXXXXXXXXXXVCAARTLSLGPLV---DEPTPCSEGGESLSIKDLFGGESPCRSRSTPTPASSIESPPKCTGENECSSEEECR-----IDSNGAPRC---IRKKE---VCISVHHLLHMNESEMTYSTHRLARVLCDEHNSCATAGHIVVYEAVPMMMSTYCNRVGCVQKIMHVNGVRYQRGRMVSSNSKGLMFSTFSARYNTGIEEKLLGVAIRIGL 457          
BLAST of Gchil9145.t1 vs. uniprot
Match: A0A2V3J1H7_9FLOR (Early nodulin-12A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1H7_9FLOR)

HSP 1 Score: 156 bits (395), Expect = 7.450e-38
Identity = 154/523 (29.45%), Postives = 204/523 (39.01%), Query Frame = 0
Query:  100 RQGLIGGLCSSDSQCQDPRQCVTIQQAA-----VVPCTPDSLICACFSPLLCSSGDDCDSGELC------LSVANITGTVCVSEDVITSTNFTVAVSEGGSGTVSIEIPDSPQTQGLNGDLCSSQGDCTESRRCFTLMGANFISCSGQENCRCVARDPSCSSISDCSSGEVCQFLDADGSVGFCISALLVPGNPAAQTNETAIEEEQHDLTDEMDMPIET----------------------------------------------------HEFGVSCTTDDDCDIDESCTALGPTGRCTPDGNPSFGAGGEFPSASVGPIAVDADVESPTDE------------PGSEFIGVTPTGD-DSD--LSESEEPSGTF-EDECQTNDDCEDGETCTASDGLSVCEAVLNGEEDVSVCISTHHLSHMKQEELLYLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVGCISKLKTVNSPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL 543
            R GL    CS+D  CQ  R CV +  +      +  C  ++ +C C     C++  DC            LS A + G + +SE                         D+  T GLN D C S  DC   R C   +   F  C G  +C CV  DPSC SIS+CS GE C   +   S   CIS   +          T I   Q  L                                                               E   +             TA       T    P+ G G     ++  PI+ D +   PT+E            P  E    +PT + D+D  +SE+EE  G    D         +GE  + ++G+          ED  +CI  HHLSHM  ++L+Y +HRVARVLCD S+SCATPGH++ YKG AMMM  YC    C+ K+  VNSPRYS    V S+++ L FTA AARY +  EE +L   VRIGL
Sbjct:   68 RAGLAFEPCSTDLPCQGERSCVQLADSELGSVEITDC--EAGLCFCADQEGCATTADCXXXXXXXXXXXXLSNAFVPGAIDISES------------------------DTSATLGLNLDRCESLADCRNPRNCVQFVDGLFGECQGT-SCFCVLADPSCISISECSDGESCTKREGS-STAICISEAALENGDVTPEEITEITTNQPPLPPMXXKXTPAAXXTEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVPATPXXXXXXXXXXXXTAAETVTEAT---EPTMGEG----DSTDEPISTDGE---PTEEETVDREPPVIPVPEGEGESSSPTDEEDTDDLMSETEEADGDLIPDPDVVITPSPEGEIPSIAEGVDGEGEPTPSPED-EICIGVHHLSHMAYKDLIYSSHRVARVLCDKSSSCATPGHIVLYKGEAMMMRKYCTITRCVQKIMRVNSPRYSRAARVDSHTEDLSFTAFAARYESAAEEHLLRAFVRIGL 551          
BLAST of Gchil9145.t1 vs. uniprot
Match: A0A2V3IF61_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF61_9FLOR)

HSP 1 Score: 147 bits (372), Expect = 5.120e-37
Identity = 73/144 (50.69%), Postives = 95/144 (65.97%), Query Frame = 0
Query:  400 ECQTNDDCEDGETCTASDGLSVCEAVLNGEEDVSVCISTHHLSHMKQEELLYLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVGCISKLKTVNSPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL 543
            +C  N DC   + C   D + +   V   E   ++CIS HHLSH+  ++L Y THR+ARVLCD  NSCAT GH++ Y+   MMMS+YC  V C+ K+  VNS RY    VV+SNS GL FTA AARYNT +EEK+L +A+R+GL
Sbjct:  132 DCSDNGDCNISQECR-EDSVGIGRCVRREE---NICISVHHLSHLHGDDLRYSTHRLARVLCDKHNSCATAGHIVIYEAVPMMMSSYCKTVRCVQKIMHVNSVRYKRRSVVQSNSKGLTFTAFAARYNTVLEEKLLGMAIRLGL 271          
BLAST of Gchil9145.t1 vs. uniprot
Match: R7QLH8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLH8_CHOCR)

HSP 1 Score: 149 bits (376), Expect = 1.640e-35
Identity = 113/358 (31.56%), Postives = 168/358 (46.93%), Query Frame = 0
Query:  204 GLNGDLCSSQGDCTESRRCFTLMGANFISCSGQENCRCVARD--PSCSSISDCSS-GEVCQFLDADGSVGFCISAL--------LVPGNPAAQTNETAIEEEQHDLTDEMDMPIETHEFGVSCTTDDDC-------DIDESCTALGPTGRCTPDGNPSFGAGGEFPSASVGPIAVDADVESPTDEPGSEFIGVTPTGDDSDLSESEEPSGTFEDECQTNDDCEDGETCTASDGLSVCEAVLNGEEDVSVCISTHHLSHMKQEELLYLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVGCISKLKTVNSPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL 543
            GL G  C+S  +C + R C         +C   ++C C   D    C+S +DC++ GEVC  L    +   C+S          +V G  ++   +TA  ++    T   D        G  CT+  +C         D S  + G    C P   P          ++ G + V  D      +  +    +   G +S    SEE +G+      T D+ +D  + + SDG        N EE    CI    L H+  + L++  H V+RVLCD +NSCAT GHM+ + G AM MSTYCD+VGC   +  VNSPR+S G  ++SN+  LE+T  AAR++TR EE M+ +AV++GL
Sbjct:  178 GLTGGRCTSSPECADGRVC---TNGEITTCPAGDDCFCAPSDGPKPCTSSADCATAGEVCAQLTGGAA---CLSEEVANAQKIPIVSGESSSDEGDTATSDDTDSHTGSGDGIT-----GAPCTSSSECAEGRICNGPDASLCSAGERCICVPSDGPEL-CTSSADCSTDGEVCVQLDDAICFSKNTANVASLPIVGGESSSDGSEENAGST----PTPDESDDPSSXSESDG--------NDEE---ACIDARALGHLPSDALVFKKHAVSRVLCDENNSCATRGHMVLFHGHAMRMSTYCDSVGCKQAVVEVNSPRFSRGMRIESNTKELEYTVFAARHDTRAEESMIRIAVQLGL 508          
BLAST of Gchil9145.t1 vs. uniprot
Match: A0A2V3IQ05_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ05_9FLOR)

HSP 1 Score: 135 bits (341), Expect = 7.610e-33
Identity = 61/110 (55.45%), Postives = 83/110 (75.45%), Query Frame = 0
Query:  434 VCISTHHLSHMKQEELLYLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVGCISKLKTVNSPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL 543
            VCI+   L+H+ Q +L+Y  HRVARVLCD+S SCATPGH++ + G  MMM++YC+AV C++K+  VNSPRY+    V S +DGL+FTA AARY T  EE +L+ A+R+GL
Sbjct:  144 VCIAARSLAHLSQRDLVYARHRVARVLCDSSGSCATPGHIVLFHGVPMMMTSYCEAVSCVAKIMHVNSPRYTRAVRVPSLTDGLQFTAFAARYQTTTEEHLLATAIRLGL 253          
BLAST of Gchil9145.t1 vs. uniprot
Match: A0A2V3IWJ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWJ3_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 4.100e-30
Identity = 66/158 (41.77%), Postives = 95/158 (60.13%), Query Frame = 0
Query:  401 CQTNDDCEDGETCTASDGLSVC---EAVLNGEE------------DVSVCISTHHLSHMKQEELLYLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVGCISKLKTVNSPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL 543
            C+T+ DC   E+C    G+  C   +  +N EE            + S CI+   L++ ++++ +Y +HR+ARVLCD S SCAT GH+ +Y+G  MMM +YC+   C   ++ VNSPRY  G  V+S S  L FTAHAARY +R+EE +L+  VR GL
Sbjct:    7 CKTDLDCASAESCRDFSGIKQCVSDQISINREELPSSKPEEPLEKNSSACIAVEVLNNFERDDFVYESHRLARVLCDASGSCATGGHIFEYEGNVMMMKSYCEMQWCTEAIRKVNSPRYRVGLRVESRSMALSFTAHAARYGSRIEEIVLTSLVRFGL 164          
BLAST of Gchil9145.t1 vs. uniprot
Match: R7QLS2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLS2_CHOCR)

HSP 1 Score: 120 bits (300), Expect = 1.340e-27
Identity = 57/110 (51.82%), Postives = 77/110 (70.00%), Query Frame = 0
Query:  434 VCISTHHLSHMKQEELLYLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVGCISKLKTVNSPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL 543
            VCI    L H+ +++L++  H +  VLCD   SCAT GH+++Y+G AMMM TYCD VGC  +   VNSPRY     V S ++GLEFT+ AARY+TR+EE+ML++ V IGL
Sbjct:  102 VCIDAAALDHVARQDLVFSNHVLKAVLCDMYGSCATDGHIVEYRGHAMMMRTYCDLVGCSKREVEVNSPRYRRRLRVPSRTEGLEFTSLAARYSTRVEERMLAIVVHIGL 211          
BLAST of Gchil9145.t1 vs. uniprot
Match: R7Q9R8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9R8_CHOCR)

HSP 1 Score: 122 bits (307), Expect = 1.950e-27
Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 0
Query:  433 SVCISTHHLSHMKQEELLYLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVGCISKLKTVNSPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL 543
            SVCI  + L H+   EL++ +HR ARVLCD   SCAT GHM+K +G AMMM T+C  VGC+ K   VNSP+Y  G  ++S + GL +TA AARY +R+EE +++ AVR GL
Sbjct:  213 SVCIDANALKHVAPRELIFESHRWARVLCDEYGSCATAGHMVKSEGKAMMMGTFCRYVGCVEKAMMVNSPKYRRGASIRSKTKGLVYTAFAARYQSRVEELIIAAAVRWGL 323          
BLAST of Gchil9145.t1 vs. uniprot
Match: A0A2V3IT07_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT07_9FLOR)

HSP 1 Score: 117 bits (294), Expect = 1.280e-25
Identity = 56/111 (50.45%), Postives = 75/111 (67.57%), Query Frame = 0
Query:  433 SVCISTHHLSHMKQEELLYLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVGCISKLKTVNSPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL 543
            S CI+  HL H+  E+LL+ TH  ARVLCD   +CATPGH++++ G  MMM +YC  V C   ++ VNSP+Y     + S S  L FTA AAR+ + +EEK+LS+AVRIGL
Sbjct:  219 SSCIAVQHLQHVPSEQLLFSTHVRARVLCDRHQNCATPGHVVQFDGRPMMMKSYCTLVTCKPSVRLVNSPKYERRARIPSRSSRLVFTALAARFESDIEEKLLSIAVRIGL 329          
BLAST of Gchil9145.t1 vs. uniprot
Match: A0A2V3IDX8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDX8_9FLOR)

HSP 1 Score: 112 bits (281), Expect = 5.610e-24
Identity = 55/111 (49.55%), Postives = 72/111 (64.86%), Query Frame = 0
Query:  434 VCISTHHLSHMKQEELLYLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVG-CISKLKTVNSPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL 543
            +CI+   L H++  +L+Y  H  ARVLCD   SCAT GHM++++G AMMM +YC+ VG C   +  VNSPRY+    + S+S  L FTA AARY T  EE +L  AV IGL
Sbjct:  205 ICIAVKSLRHLQPHQLVYRKHMTARVLCDTHGSCATAGHMVRFRGRAMMMKSYCELVGNCERSITLVNSPRYTRALQIPSDSPDLTFTAFAARYATTAEEHVLRTAVHIGL 315          
The following BLAST results are available for this feature:
BLAST of Gchil9145.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A2V3IFA6_9FLOR3.010e-5532.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1H7_9FLOR7.450e-3829.45Early nodulin-12A n=1 Tax=Gracilariopsis chorda Ta... [more]
A0A2V3IF61_9FLOR5.120e-3750.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLH8_CHOCR1.640e-3531.56Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IQ05_9FLOR7.610e-3355.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IWJ3_9FLOR4.100e-3041.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QLS2_CHOCR1.340e-2751.82Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q9R8_CHOCR1.950e-2752.25Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IT07_9FLOR1.280e-2550.45Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IDX8_9FLOR5.610e-2449.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 362..398
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..543
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:2002019..2003650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9145.t1Gchil9145.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 2002019..2003650 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9145.t1 ID=Gchil9145.t1|Name=Gchil9145.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=544bp
MSYLRVATLLCLSLLITSSLAVPSHSRHASASLQRKQQLFHSPLDHKAAL
HVFNQAEKIRTSRSGLNVESLPSFLNRLFEKRTPSTPNGLESALAKVSDR
QGLIGGLCSSDSQCQDPRQCVTIQQAAVVPCTPDSLICACFSPLLCSSGD
DCDSGELCLSVANITGTVCVSEDVITSTNFTVAVSEGGSGTVSIEIPDSP
QTQGLNGDLCSSQGDCTESRRCFTLMGANFISCSGQENCRCVARDPSCSS
ISDCSSGEVCQFLDADGSVGFCISALLVPGNPAAQTNETAIEEEQHDLTD
EMDMPIETHEFGVSCTTDDDCDIDESCTALGPTGRCTPDGNPSFGAGGEF
PSASVGPIAVDADVESPTDEPGSEFIGVTPTGDDSDLSESEEPSGTFEDE
CQTNDDCEDGETCTASDGLSVCEAVLNGEEDVSVCISTHHLSHMKQEELL
YLTHRVARVLCDNSNSCATPGHMIKYKGAAMMMSTYCDAVGCISKLKTVN
SPRYSPGKVVKSNSDGLEFTAHAARYNTRMEEKMLSLAVRIGL*
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