Gchil9132.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil9132.t1
Unique NameGchil9132.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length93
Homology
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BLAST of Gchil9132.t1 vs. uniprot
Match: A0A2V3IQQ2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQQ2_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 4.140e-30
Identity = 48/89 (53.93%), Postives = 72/89 (80.90%), Query Frame = 0 
Query:    2 VSRRKSGATKRKVRVLLQVPENIAKLLNDSDGTTKIQFESIDPPILTVGDKRLIGRYEDVIGTDMVFDPSKSENAGYIGACTKRLICTE 90
            V +RK G TK++ RVLLQVPE+IAK+L++     +++F+S+DPP+L +  +R+ GR+EDV+GTD+VFD +K+ENAGYI  CT+RL+C +
Sbjct:   13 VGKRKVGVTKKRKRVLLQVPEHIAKVLSEPGAELRVKFQSLDPPVLIIDGQRIEGRFEDVVGTDLVFDQTKTENAGYIAGCTRRLLCKQ 101
The following BLAST results are available for this feature:
BLAST of Gchil9132.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQQ2_9FLOR4.140e-3053.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.4370coord: 4..92
e-value: 1.0E-6
score: 30.5
IPR019481Transcription factor TFIIIC, triple barrel domainPFAMPF10419TFIIIC_sub6coord: 18..91
e-value: 2.4E-7
score: 30.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004370_piloncontigtig00004370_pilon:1973377..1973731 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil9132.t1Gchil9132.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004370_pilon 1973377..1973731 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil9132.t1 ID=Gchil9132.t1|Name=Gchil9132.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=93bp
MVSRRKSGATKRKVRVLLQVPENIAKLLNDSDGTTKIQFESIDPPILTVG
DKRLIGRYEDVIGTDMVFDPSKSENAGYIGACTKRLICTEKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019481TFIIIC_triple_barrel